mRNA_H-paniculata_contig34069.9103.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.150e-21 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 4 AVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGFR 213
AVN+D++MN EI+LWAA NGG+ Y AV+ HADTTW D VRDD ST+HVA YDP+TG+LV +G G++
Sbjct: 98 AVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQ 167
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 8.060e-21 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 4 AVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGFR 213
AVN+D++MN EI+LWAA NGG+ Y AV+ HADTTW D VR+D ST+HVA YDP+TGDL +G G++
Sbjct: 98 AVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQ 167
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.610e-18 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 4 AVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGFR 213
AVN+D++MN EI+LWAA N G+ Y A + HADTTW D VRDD STFHVA Y+ +TG+LV +G G++
Sbjct: 156 AVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQ 225
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.450e-17 Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 4 AVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGF 210
AVN+D+MMN EILLWA NGG D L V HAD+TWKD VR+DNST HVAAYD TG+L+ G G+
Sbjct: 223 AVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGY 290
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.480e-17 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 4 AVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGF 210
AVN+D+MMN EILLWA NGG D L V+ HAD+TWKD VR+DNST HVAAYD TG+ + G G+
Sbjct: 186 AVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGY 253
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: A0A366VXF1_9GAMM (Uncharacterized protein n=2 Tax=Psychromonas sp. B3M02 TaxID=2267226 RepID=A0A366VXF1_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-14 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 7 VNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFG 207
V +D+MMN E+LLWAAENGG+ + K HA T++DF+R+D S++H+ Y+ TG+++ +G L G
Sbjct: 180 VVIDIMMNLELLLWAAENGGDTQWAEIAKDHALKTYQDFIREDGSSYHIVRYNKTTGEVINKGTLQG 246
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 2.980e-13 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 7 VNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYD 165
VN+D+MMN EI+LWA+++GGN A+ A HAD +W+D VRDD STFHV Y+
Sbjct: 178 VNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYN 230
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: UPI001357D25C (glycoside hydrolase family 88 protein n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=UPI001357D25C) HSP 1 Score: 71.6 bits (174), Expect = 7.290e-13 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 16 DVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFG 207
D+MMN E+LLWAAENGG+ + K HA T+KDFVR++ S++H+ Y+ +G ++ +G L G
Sbjct: 192 DIMMNLELLLWAAENGGDKKWAEYAKTHALKTYKDFVRENGSSYHIVRYNKDSGAIINKGTLQG 255
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: A0A841H3G4_9BACT (Uncharacterized protein n=2 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H3G4_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 4.340e-11 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 16 DVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGF 210
D MMN E+LLWAA NGG+ A+ KRHA+TT + +R D ++H+ +D ATG +V R + G+
Sbjct: 182 DNMMNLEMLLWAARNGGDPAWTELSKRHAETTMRAHLRPDGGSYHLVDFDSATGAIVARKTVQGY 246
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Match: UPI001FE32E8F (glycoside hydrolase family 88 protein n=1 Tax=Flavihumibacter stibioxidans TaxID=1834163 RepID=UPI001FE32E8F) HSP 1 Score: 65.5 bits (158), Expect = 1.120e-10 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 7 VNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHVAAYDPATGDLVGRGMLFGF 210
V +D MMN E+L WAA+ G+ ++ +HA+TT K+ VR D+S+FHV YDP +G ++ + L GF
Sbjct: 180 VIMDNMMNLELLFWAAKETGDSSFYHIAVKHAETTRKNHVRPDHSSFHVVNYDPVSGKMLHQQTLQGF 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34069.9103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34069.9103.1 >prot_H-paniculata_contig34069.9103.1 ID=prot_H-paniculata_contig34069.9103.1|Name=mRNA_H-paniculata_contig34069.9103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp MAVNLDVMMNTEILLWAAENGGNDAYLTAVKRHADTTWKDFVRDDNSTFHback to top mRNA from alignment at H-paniculata_contig34069:1413..2151+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34069.9103.1 ID=mRNA_H-paniculata_contig34069.9103.1|Name=mRNA_H-paniculata_contig34069.9103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=739bp|location=Sequence derived from alignment at H-paniculata_contig34069:1413..2151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34069:1413..2151+ >mRNA_H-paniculata_contig34069.9103.1 ID=mRNA_H-paniculata_contig34069.9103.1|Name=mRNA_H-paniculata_contig34069.9103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig34069:1413..2151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |