prot_H-paniculata_contig34068.9102.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34068.9102.1
Unique Nameprot_H-paniculata_contig34068.9102.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length318
Homology
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 203 bits (517), Expect = 9.840e-57
Identity = 119/317 (37.54%), Postives = 186/317 (58.68%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRR-EKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPP---YRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPE 313
            M++E  +L E+  WE  +   LP  RKA+  KW+FK K   DGS+ R+KARLVAQ F Q  G D+ E  +PV R  ++RTV +L+ +   +L  MDV AA+LN  +E+E+++K P  F    ++      L KSLYGLKQS R W + LD+ L  IG  ++ +D C+Y   +DG     +VA++VDD+++AG+  EK+ + K SI++RF++KD+G L  +LG++V ++  +  +   Q +Y   ++K  G + C+ V        K V         N  E++  VGS +Y S+ TRPD+ +AV+  A  + +P  E
Sbjct:  165 MQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNE 473          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 201 bits (511), Expect = 1.260e-55
Identity = 115/312 (36.86%), Postives = 178/312 (57.05%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKV-DESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVP-PYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDP 310
            ++ E  +++ NGTWE  D    P G K +  KW+FK+KL+ DG++ +YKARLVA+ + Q EGED+F+  +PVAR++T+R + SLAA H F +  MDV  A+LN  +EEE+++  P  F    ++    + L KSLYGLKQ+ + W    D  L   G   +  D C+Y     GG   +++ +YVDD++I G   KV  E K  +S  F MKDLG    ++ I++ R+  NG +T  Q  Y+ +VL   G+ EC   P PY        +   + +      ++GS MY ++ TRPD+++AV + +    +P
Sbjct:  205 VQSEMDSIMSNGTWEVVD---RPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIANGQEGKVCKLL-KSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRF--GGGDGVILCLYVDDILIFGNNLKVIKEVKEFLSNNFEMKDLGEADVIVNIKLSREEGNGWVTLMQSHYVEKVLNRFGYSECTPAPTPYDPSVRLRKNHRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNP 510          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM)

HSP 1 Score: 197 bits (501), Expect = 1.290e-55
Identity = 123/319 (38.56%), Postives = 185/319 (57.99%), Query Frame = 0
Query:    4 EWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVDES-KHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQESSRGRSGNSTEN------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCP 312
            E  +L++N TW   D   LP GRKAI  +W+F+ K  + G + R+KARLVA+ F Q  G D+ E  APVA+ +++R V SLAA++  +L  MDV  A+LN  ++E++++  P  +     D P  V  L +SLYGLKQS R W  T+DDF++ +G ++  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ ES KH++S+RF M DLG L   LG+E+ +D   G ++  Q  + +++L+    D+   V  P   G ++ ++         E       R  VG  MY   GTRPD+A AV   +    DPCP
Sbjct:  183 ECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCP 494          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 203 bits (517), Expect = 3.440e-55
Identity = 116/297 (39.06%), Postives = 179/297 (60.27%), Query Frame = 0
Query:   23 PAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGR-REKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV-----PPYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPE 313
            P GRK +  KW+FK K   DGS+ +YKARLVA+ F Q EG D+ +  APV++ +++RTV +LAA +D +++ MDV +A+LN  ++EE+++  PP F     D   V  L KSLYGLKQ+ R W   +      +G ERS  D  ++   ++G    L++A+YVDD++IAG  R  +D  K ++S+RF M DLGS   +LG+E+ RDR   T++ SQ  YI ++L+  G   CR V     P  + +++ E++     +    +  +GS MYA  G+RPD+A+AV   +  +  P P+
Sbjct: 1027 PRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVI--LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATI----DPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQ 1314          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A8D9B1F5_9HEMI (Copia protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9B1F5_9HEMI)

HSP 1 Score: 196 bits (499), Expect = 4.540e-55
Identity = 117/304 (38.49%), Postives = 174/304 (57.24%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIA-GRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVH 301
            MEEE  AL EN TW   +    P  +  I+ KW+F++K   +G++ ++KARLVA+ F Q  G D+ E  APVA++ST+RTV ++A   D  L  MDV  A+LN  +EEE+++  P  ++  +  +  V  L KSLYGLKQS R W    +DF+V  G ERS  D CLYS  ++G      V +YVDDL++      K+   K+ + + F+M D G L   LGIE+ RD   GT++ SQ  YI ++L      +C+GV  P  +G +++++      N    R ++G  MY    TRPD+ Y ++
Sbjct:   40 MEEEMSALHENRTWNLTEN---PGNKNVIKCKWVFQKKFNSEGNIEKFKARLVAKGFQQRRGIDYDEIFAPVAKLSTIRTVLAIANHKDLFLHQMDVKTAFLNGVLEEEIYMYQPEGYNSVNSGM--VCKLNKSLYGLKQSPRCWNKRFNDFMVTSGFERSKNDYCLYSRFEEG--LTFYVILYVDDLILCCNDLNKIQNMKNRLCKEFKMTDFGKLKFFLGIEIERDEEKGTLSMSQKQYILKLLDRFQMTDCKGVNTPMEKGLQLEKNISSVVINKPY-RELIGCLMYLMLATRPDICYTIN 335          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 203 bits (516), Expect = 4.610e-55
Identity = 125/325 (38.46%), Postives = 179/325 (55.08%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRR-EKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPPYRGKRVQESSRGRSGNSTEN-----------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPE 313
            M+EE   + E GT+  ED   LPAGR  I  KW+F +K  EDG+++RYKARLVAQ + Q  G D+ E  APV R+ ++R    +AA  D E+  MDV  AYLN  +EEE++++ P  +   S  +  +R   K+LYGLKQSGR W    D  L  IG  +   D C+Y    +G  +  ++ V+VDDL+I     E + E+K  +   F +KDLG   +++GIE++RDR NGTI+ SQ  YI  VL   G    R V       V    R      T++           + ++GS +YA+ GTRPD+++AV +      +P PE
Sbjct:  898 MDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLR---KTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREG--RMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKR------TDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPE 1208          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 202 bits (515), Expect = 5.990e-55
Identity = 125/321 (38.94%), Postives = 187/321 (58.26%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGR-REKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVP----------PYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDP 310
            ++ E  ++++N TW+  D   LP G K +  K IF+RK+K DG+V +YKARLV Q F Q EG DFF+  APVAR+ST+R + +LAA H+  +  MDV  A+LN  ++EE+++K P  F     +   V  L KSLYGLKQ+ + W    D+ ++  G   +  D CLYS  D  G K +++ +YVDD++I G  +++VDE+K  +S +F MKD+G    +LGI+++R   N  I+ SQ  YI ++L+   F +C  V           P +G  V +    R+         +GS MYA   TRPD+AYAV + +  T +P
Sbjct:  557 IQSEMDSIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENK-VCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHG-KGVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNKGVAVSQLEYSRA---------IGSLMYAMISTRPDIAYAVAKLSRFTSNP 861          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 189 bits (481), Expect = 7.530e-55
Identity = 105/255 (41.18%), Postives = 161/255 (63.14%), Query Frame = 0
Query:    4 EWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVDES-KHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV 256
            E  +L++N TW   D   LP GRKAI  +W+F+ K  + G + R+KARLVA+ F Q  G D+ E  APVA+ +++R V SLAA++  +L  MDV  A+LN  ++E++++  P  +     D P  V  L +SLYGLKQS R W  T+DDF++ +G ++  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ ES KH++S+RF M DLG L   LG+E++ DR +G +T  Q  +++ +L   G  + + V
Sbjct:    7 ECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKDNQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPV 254          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 202 bits (514), Expect = 8.280e-55
Identity = 120/317 (37.85%), Postives = 185/317 (58.36%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRR-EKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPP---YRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPE 313
            M++E  +L E+  WE  +   LP  RKA+  KW+FK K   DGS+ R+KARLVAQ F Q  G D+ E  +PV R   +RTV +L+ +   +L  MDV AA+LN  +E+E+++K P  F    ++   V  L KSLYGLKQS R W + LD+ L  IG  ++ +D C+Y   +DG     +VA++VDD+++AG+  EK+ + K SI++RF++KD+G L  +LG++V ++  +  +   Q +Y   ++K  G + C+ V        K V         N  E +  VGS +Y S+ TRPD+ +AV+  A  + +P  E
Sbjct:  779 MQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNE 1087          
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 195 bits (496), Expect = 8.570e-55
Identity = 120/303 (39.60%), Postives = 180/303 (59.41%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIA-GRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRG--VPPYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAV 300
            M++E  +L ENGTW+  D   LP GRKA+  KWIFKRKL EDG+V RYKARLVAQ F Q  G D+ E  APV R  T R + ++A++    ++  DV  AYLN  +EE +F++ PP +   +RD   V SL KSLYGLKQ+G  W    D  L  +  ++S  D CLY  R+  G   L++  YVDD+VIA    E+ +E   ++++ F++  LG +S  LGI++ R+    ++  SQ +YI+++L+  G ++ +    P   G   Q+  +    N+ +   ++GS +Y +  TRPD+A +V
Sbjct:   13 MDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRNEKGFSL--SQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSV 306          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9HZ03_PARCT9.840e-5737.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
C6JRI2_SORBI1.260e-5536.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7U0_PHYRM1.290e-5538.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VV58_TRAPU3.440e-5539.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A8D9B1F5_9HEMI4.540e-5538.49Copia protein n=1 Tax=Cacopsylla melanoneura TaxID... [more]
A0A284QR88_ARMOS4.610e-5538.46Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A445HPU2_GLYSO5.990e-5538.94Retrovirus-related Pol polyprotein from transposon... [more]
H3H934_PHYRM7.530e-5541.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT8.280e-5537.85Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A182GIT5_AEDAL8.570e-5539.60Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..255
e-value: 1.5E-58
score: 198.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..231
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 22..237
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34068contigH-paniculata_contig34068:859..1894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34068.9102.1mRNA_H-paniculata_contig34068.9102.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34068 353..1903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34068.9102.1 ID=prot_H-paniculata_contig34068.9102.1|Name=mRNA_H-paniculata_contig34068.9102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp
MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKA
RLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAA
YLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLD
DFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVDES
KHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGF
DECRGVPPYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAV
HQAAPRTEDPCPEDLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like