mRNA_H-paniculata_contig34068.9102.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.340e-80 Identity = 165/406 (40.64%), Postives = 228/406 (56.16%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIA-GRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQES--SRGRSGNSTEN----RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQST 1191
+ A E E+ +L +N TWE LP GRKAI KW+FK K +G + RYKARLVA+ F Q G DF E APVA+ +++R + S+AA++ L MDV A+LN +EEE+++K P F ++ V L ++LYGLKQS R W T+D+F+ IG + TD C+Y RDD + V +YVDDL++A + + +K ++S+RF M DLG L LG+EV RD +G ++ Q ++ VL G +C+ V P G ++ ++ G + T R VG+ MY GTRPD+A AV + DPCP KR+ YL P GI F +G L G+ DADWA D+E R+ST GYVF LNGG I+W S+ R V ST
Sbjct: 10 KEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAM--IFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITW-----RSKKQRTVALSST 403
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 263 bits (672), Expect = 5.290e-77 Identity = 149/383 (38.90%), Postives = 226/383 (59.01%), Query Frame = 1
Query: 7 AMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRR-EKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPP---YRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCS 1143
AM++E +L E+ WE + LP RKA+ KW+FK K DGS+ R+KARLVAQ F Q G D+ E +PV R ++RTV +L+ + +L MDV AA+LN +E+E+++K P F ++ L KSLYGLKQS R W + LD+ L IG ++ +D C+Y +DG +VA++VDD+++AG+ EK+ + K SI++RF++KD+G L +LG++V ++ + + Q +Y ++K G + C+ V K V N E++ VGS +Y S+ TRPD+ +AV+ A + +P E + KRIF YL ++G+ + +N GF DADWA D+ DRKST GY F++NG +SW S
Sbjct: 164 AMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANP-DCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRS 537
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM) HSP 1 Score: 267 bits (682), Expect = 2.600e-75 Identity = 158/424 (37.26%), Postives = 239/424 (56.37%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVDES-KHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPPYRGKRVQESSRGRSGNSTEN-------------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQSTLLQEKRERIRYI 1227
+ A + E +L++N TW D LP GRKAI +W+F+ K + G V R+KARLVA+ F Q G D+ E APVA+ +++R V SLAA++ +L MDV A+LN ++E++++ P + D P V L +SLYGLKQS R W T+DDF++ +G ++ +D C+Y RD G+ + VA+YVDDLV+A +++ ES KH++S+RF M DLG L LG+E++ D +G +T Q +++ +L G + + V K Q+ + N E R VG+ MY TRPD+A AV + + DPCP KR+ YL P G+ F S+ + +G+ G+ DADWA D+E R+ST GY F +NGG ISW S + + + + L E + + ++
Sbjct: 672 KEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPV-----KTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF-SREDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWL 1082
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3H1B2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1B2_PHYRM) HSP 1 Score: 252 bits (643), Expect = 1.400e-74 Identity = 151/391 (38.62%), Postives = 224/391 (57.29%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVD-ESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQESSRGRSGNSTEN------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCS 1143
+ A + E +L++N TW D LP GRKAI +W+F+ K + G + R+KARLVA+ F Q G D+ E APVA+ +++R V SLAA++ +L MDV A+LN ++E++++ P + D P V L +SLYGLKQS R W T+DDF++ +G ++ +D C+Y RD G + VA+YVDDLV+A +K+ ++K ++S RF M D+G L LG+E+ +D G ++ Q + +++L+ D+ V P G ++ ++ E R VG MY GTRPD+A AV + DPCP KR+F Y+ GI F + + GL+G+ DADWA D+E R+ST GY F +NGG ISW S
Sbjct: 40 KEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GHDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIEFQASCHD-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRS 422
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 262 bits (669), Expect = 2.230e-73 Identity = 150/383 (39.16%), Postives = 225/383 (58.75%), Query Frame = 1
Query: 7 AMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRR-EKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGVPP---YRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCS 1143
AM++E +L E+ WE + LP RKA+ KW+FK K DGS+ R+KARLVAQ F Q G D+ E +PV R +RTV +L+ + +L MDV AA+LN +E+E+++K P F ++ V L KSLYGLKQS R W + LD+ L IG ++ +D C+Y +DG +VA++VDD+++AG+ EK+ + K SI++RF++KD+G L +LG++V ++ + + Q +Y ++K G + C+ V K V N E + VGS +Y S+ TRPD+ +AV+ A + +P E + KRIF YL ++G+ + +N GF DADWA D+ DRKST GY F++NG +SW S
Sbjct: 778 AMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANP-DCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRS 1151
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 262 bits (670), Expect = 2.340e-73 Identity = 160/405 (39.51%), Postives = 225/405 (55.56%), Query Frame = 1
Query: 7 AMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIA-GRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQES------SRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQST 1191
A + E+ +L +N TWE LP GRKAI KW+FK K +G + RYKARLVA+ F Q G DF E APVA+ +++R + SLAA++ L MDV A+LN ++EE+++K P + P L ++LYGLKQS R W T+D+F+ IG + D C+Y R+D + V +YVDDL++A ++ + +K ++S+RF M DLG L LG+EV+RD +G ++ Q +++ VL G +C+ V P G ++ +S + R VG+ MY GTRPD+A +V + DPCP KR+ YL P GI F S+G L G+ DADWA D+E R+ST GYV LNGG ISW S+ R V ST
Sbjct: 882 ACDSEFESLRKNETWELVP---LPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGY--IDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSAT--MFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISW-----RSKKQRTVALSST 1273
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 260 bits (664), Expect = 1.340e-72 Identity = 156/407 (38.33%), Postives = 235/407 (57.74%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSR---DDGGEKDLLVAVYVDDLV-IAGRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQE-SSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQSTLL 1197
+ A + E+ AL+ENGTWE P P + + +W+FK K K DGSV ++KARLVAQ + Q EG D+ E +PV R +++R++ +LA D+E+ MDV A+L + +E+++K P + S++ P V L KSLYGLKQS R W +TLD FL G ++ DSCLY +G ++++++VDD++ + ++E K +I +F+++DLG +S +LG+ ++RDR + T+T SQ Y+ VLK +EC+ V P GK+ E S R N E + ++G Y +T TRPD+A AV + P E KRI Y+ +FGITF +K L G+ DADWA D E R+ST GY+F+++G ISWCS + S + + L
Sbjct: 849 KKATDSEFNALMENGTWELVPP---PDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYR--SKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMAL 1250
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 247 bits (631), Expect = 1.920e-72 Identity = 154/391 (39.39%), Postives = 221/391 (56.52%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIA-GRREKVDESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRG--VPPYRGKRVQESSRGRSGNSTENRGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQS 1164
+AAM++E +L ENGTW+ D LP GRKA+ KWIFKRKL EDG+V RYKARLVAQ F Q G D+ E APV R T R + ++A++ ++ DV AYLN +EE +F++ PP + +RD V SL KSLYGLKQ+G W D L + ++S D CLY R+ G L++ YVDD+VIA E+ +E ++++ F++ LG +S LGI++ R+ ++ SQ +YI+++L+ G ++ + P G Q+ + N+ + ++GS +Y + TRPD+A +V P D + KRI YL D + G L E +VDADWA DV+ RKS GY+F GG I W GS Q+
Sbjct: 10 KAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRNEKGFSL--SQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHELVLGQGERNL--EVYVDADWANDVKSRKSNSGYLFLFGGGPICW---GSRKQT 386
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3GQK5_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQK5_PHYRM) HSP 1 Score: 253 bits (647), Expect = 2.190e-71 Identity = 155/407 (38.08%), Postives = 230/407 (56.51%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVD-ESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQESSRGRSGNSTEN------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQST 1191
+ A + E +L++N TW D LP GRKAI +W+F+ K + G + R+KARLVA+ F Q G D+ E APVA+ +++R V SLAA++ +L MDV A+LN ++E++++ P + D P V L +SLYGLKQS R W T+DDF++ +G ++ +D C+Y RD G+ + VA+YVDDLV+A +K+ ++K ++S RF M D+G L LG+E+ +D G ++ Q + +++L+ D+ V P G ++ ++ E R VG MY GTRPD+A AV + DPCP KR+F Y+ GI F + + GL+G+ DADWA D+E R+ST GY F +NGG ISW S+ R V ST
Sbjct: 435 KEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDEIFAPVAKFTSIRIVLSLAAKYSLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDIIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMMDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIEFQASCHD-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISW-----RSKKQRTVALSST 828
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM) HSP 1 Score: 253 bits (645), Expect = 4.430e-71 Identity = 155/407 (38.08%), Postives = 229/407 (56.27%), Query Frame = 1
Query: 1 RAAMEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKARLVAQDFFQAEGEDFFEATAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFSPFSRDIP-FVRSLGKSLYGLKQSGRNWINTLDDFLVGIGLERSTTDSCLYSSRDDGGEKDLLVAVYVDDLVIAGRREKVD-ESKHSISQRFRMKDLGSLSRVLGIEVRRDRPNGTITTSQGSYIREVLKISGFDECRGV--PPYRGKRVQESSRGRSGNSTEN------RGMVGSFMYASTGTRPDMAYAVHQAAPRTEDPCPEDLST*KRIFCYLSTVPDFGITFGSKSNGLGLEGFVDADWAEDVEDRKSTPGYVFKLNGGGISWCSIGSNSQSHRPVQRQST 1191
+ A + E +L++N TW D LP GRKAI +W+F+ K + G + R+KARLVA+ F Q G D+ E APVA+ +++R V SLAA++ +L MDV A+LN ++E++++ P + D P V L +SLYGLKQS R W T+DDF++ +G ++ +D C+Y RD G+ + VA+YVDDLV+A +K+ ++K ++S RF M D+G L LG+E+ +D G ++ Q + +++L+ D+ V P G ++ ++ E R VG MY GTRPD+A AV + DPCP KR+F Y+ GI + N GL+G+ DADWA D+E R+ST GY F +NGG ISW S+ R V ST
Sbjct: 434 KEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GQDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIESQASCND-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISW-----RSKKQRTVALSST 827 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34068.9102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34068.9102.1 >prot_H-paniculata_contig34068.9102.1 ID=prot_H-paniculata_contig34068.9102.1|Name=mRNA_H-paniculata_contig34068.9102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp MEEEWGALVENGTWESEDPRRLPAGRKAIRKKWIFKRKLKEDGSVARYKAback to top mRNA from alignment at H-paniculata_contig34068:353..1903- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34068.9102.1 ID=mRNA_H-paniculata_contig34068.9102.1|Name=mRNA_H-paniculata_contig34068.9102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1551bp|location=Sequence derived from alignment at H-paniculata_contig34068:353..1903- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34068:353..1903- >mRNA_H-paniculata_contig34068.9102.1 ID=mRNA_H-paniculata_contig34068.9102.1|Name=mRNA_H-paniculata_contig34068.9102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1908bp|location=Sequence derived from alignment at H-paniculata_contig34068:353..1903- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |