prot_H-paniculata_contig34056.9100.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34056.9100.1
Unique Nameprot_H-paniculata_contig34056.9100.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.090e-20
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    8 KAAVKPLITKLMRMQW-TGWKNPFSTVLTRHNAPPRYFDIIVRPMNLTYVRDNVNRNKYSTV 68
            K+ VKPLI++L+ M+W +GW NPF+TV  + NAPPRYF+ I RPMNLT++RDN+N+NKY+TV
Sbjct:  175 KSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTV 236          
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Match: A0A8K1CEI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL)

HSP 1 Score: 50.8 bits (120), Expect = 1.100e-5
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0
Query:    7 IKAAVKPLITKLMRMQWTGW------KNPFSTVLTRHNAP----PRYFDIIVRPMNLTYVRDNVNRNKYSTV 68
            ++  + PLIT+L  + W+GW       NPF   +T+ N      P YFD +  PM+LT +++ V + +YS +
Sbjct:  169 LQKVLAPLITELRSLTWSGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRI 240          
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Match: A0A5D6YD80_9STRA (Bromo domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.510e-5
Identity = 24/72 (33.33%), Postives = 39/72 (54.17%), Query Frame = 0
Query:    7 IKAAVKPLITKLMRMQWTGW------KNPFSTVLTRHNAP----PRYFDIIVRPMNLTYVRDNVNRNKYSTV 68
            ++  + PL+T+L  + W GW       NPF   +TR N      P YFD +  PM+LT +++ V + +Y+ V
Sbjct:  167 LQTLLAPLVTELRGLTWAGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARV 238          
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Match: A0A1Z5KQ91_FISSO (Bromo domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ91_FISSO)

HSP 1 Score: 50.1 bits (118), Expect = 2.080e-5
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0
Query:   13 PLITKLMRMQWT--GWKNPFSTVLTRHNAP----PRYFDIIVRPMNLTYVRDNVNRNKYSTV 68
            P+  KL  M++   G  NPF  V+ R N      P YFDII +PMNLTY++  V   KY ++
Sbjct:  202 PIFKKLWEMEFAHLGGINPFRVVIDRENCASVGAPDYFDIIEKPMNLTYIQQKVEGRKYESL 263          
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Match: A0A3F2RFR5_9STRA (Bromo domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 3.820e-5
Identity = 24/72 (33.33%), Postives = 38/72 (52.78%), Query Frame = 0
Query:    7 IKAAVKPLITKLMRMQWTGWK------NPFSTVLTRHNAP----PRYFDIIVRPMNLTYVRDNVNRNKYSTV 68
            ++  + PL+T+L  + W GW       NPF    T+ N      P YFD +  PM+LT +++ V R +YS +
Sbjct:  151 LQKLLAPLVTELRGLTWAGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKI 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34056.9100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JP76_9PHAE1.090e-2062.90Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A8K1CEI2_PYTOL1.100e-533.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YD80_9STRA1.510e-533.33Bromo domain-containing protein n=1 Tax=Pythium br... [more]
A0A1Z5KQ91_FISSO2.080e-541.94Bromo domain-containing protein n=1 Tax=Fistulifer... [more]
A0A3F2RFR5_9STRA3.820e-533.33Bromo domain-containing protein n=2 Tax=Phytophtho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 4..68
e-value: 1.5E-7
score: 32.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 12..68
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 22..68
score: 9.421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34056contigH-paniculata_contig34056:495..698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34056.9100.1mRNA_H-paniculata_contig34056.9100.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34056 495..698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34056.9100.1 ID=prot_H-paniculata_contig34056.9100.1|Name=mRNA_H-paniculata_contig34056.9100.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
RSTAISIKAAVKPLITKLMRMQWTGWKNPFSTVLTRHNAPPRYFDIIVRP
MNLTYVRDNVNRNKYSTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain