prot_H-paniculata_contig34049.9097.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34049.9097.1
Unique Nameprot_H-paniculata_contig34049.9097.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 92.4 bits (228), Expect = 1.680e-17
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    1 MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            +A S++P     EA  AA Y LNR+P + H+     E W G  PKL  +R+FGC A+    S +RRKLD +A   +FLGY  ++++YR YNP N+ V LSR++RF E
Sbjct:  158 LAESQLPNLFWAEAVYAAAYLLNRSPCKSHSSTP-EEIWSGKKPKLSHIRIFGCKAFAHVPSDRRRKLDKRATVCIFLGYSLESKAYRLYNPANRRVFLSRDVRFSE 263          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A2Z6N7E5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N7E5_TRISU)

HSP 1 Score: 90.5 bits (223), Expect = 7.640e-17
Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   13 EAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            EA   AVY LNR P++        E W G  P L +L+VFGC AY     Q R+KLDDKA   +F+GY E+ ++Y+ YNPE + V +SR++ FDE
Sbjct:  638 EAVTCAVYLLNRCPVKSIRDKTPQEAWSGQKPILSNLKVFGCIAYAHVPDQLRKKLDDKAEKCIFVGYSEETKAYKVYNPETQKVVISRDVTFDE 732          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A151S498_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S498_CAJCA)

HSP 1 Score: 85.1 bits (209), Expect = 1.650e-15
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   13 EAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            EA   ++Y LN  P +   G   +E WHG  P ++ L+VFGC         +R KLD K+  GVFLGY+ +++ YR YNP +K + +SRN++FDE
Sbjct:    6 EAVNTSIYLLNLLPTKALKGKIPFEAWHGRKPSMEHLKVFGCVL-CSCSRMKRDKLDQKSKVGVFLGYNNNSKGYRIYNPTSKKILVSRNVKFDE 99          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN)

HSP 1 Score: 85.9 bits (211), Expect = 3.060e-15
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            M   ++P     EA   A Y LNR   +       YE W+G  P ++ L+VFGC AYV    Q+R KLD K    VF+GY E+++ Y+ YNP++  + +SR++ FDE
Sbjct: 1364 MNAKELPTCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 1470          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: V9H0W6_ARATH (Lectin receptor kinase (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=V9H0W6_ARATH)

HSP 1 Score: 85.1 bits (209), Expect = 4.330e-15
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    5 KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            ++P     EA   AVY LNR+P +  +G    E W G  P +  LRVFG  A+     ++R KLDDK+   +F+GYD +++ Y+ YNP+ K   +SRN+ FDE
Sbjct:  147 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 249          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: Q9M197_ARATH (Copia-type reverse transcriptase-like protein n=6 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9M197_ARATH)

HSP 1 Score: 85.1 bits (209), Expect = 5.250e-15
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    5 KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            ++P     EA   AVY LNR+P +  +G    E W G  P +  LRVFG  A+     ++R KLDDK+   +F+GYD +++ Y+ YNP+ K   +SRN+ FDE
Sbjct:  650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN)

HSP 1 Score: 85.1 bits (209), Expect = 5.340e-15
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            M   ++P     EA   A Y LNR   +       YE W+G  P ++ L+VFGC AYV    Q+R KLD K    VF+GY E+++ Y+ YNP++  + +SR++ FDE
Sbjct:  612 MNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 718          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E)

HSP 1 Score: 84.0 bits (206), Expect = 1.230e-14
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    5 KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            ++P     EA   AVY LNR+P +  +G    E W G  P +  LRVFG  A+     ++R KLDDK+   +F+GYD +++ Y+ YNP+ K   +SRN+ FDE
Sbjct:  649 RLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDE 751          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 82.4 bits (202), Expect = 3.820e-14
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 0
Query:    1 MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDEGFH 110
            +A +K+P     EA   AVY  NR+P +   G   +E W G  PK+D LR+FGCT Y      +R+KLD KA   + LGY  + + YR Y+ +   V  SR++ F+E  H
Sbjct:   66 LADAKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNH 175          
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A699M2G2_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699M2G2_TANCI)

HSP 1 Score: 77.8 bits (190), Expect = 5.610e-14
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 107
            M   K+P+    EA + A+Y LNR P R       YE  +   P L++LR+FGCTAY        +KLDD++   ++LG +E +++ R Y+P+ K   +SR++RF E
Sbjct:   63 MKAMKLPLTFWAEAVKHAIYILNRVPTRALVDKTPYEALYNRKPNLENLRIFGCTAYAKITIPHLKKLDDRSIPMIYLGVEEGSKACRLYDPKGKRNHVSRDVRFME 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5FV69_9HEMI1.680e-1744.86Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A2Z6N7E5_TRISU7.640e-1746.32Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A151S498_CAJCA1.650e-1542.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A251SKN6_HELAN3.060e-1539.25Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
V9H0W6_ARATH4.330e-1540.78Lectin receptor kinase (Fragment) n=1 Tax=Arabidop... [more]
Q9M197_ARATH5.250e-1540.78Copia-type reverse transcriptase-like protein n=6 ... [more]
A0A251UIF2_HELAN5.340e-1539.25Integrase catalytic domain-containing protein n=1 ... [more]
UPI000A29CC5E1.230e-1440.78uncharacterized protein LOC110224828 n=1 Tax=Arabi... [more]
A0A498M2F0_LABRO3.820e-1439.09Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A699M2G2_TANCI5.610e-1437.38Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 13..106
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34049contigH-paniculata_contig34049:1086..1953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34049.9097.1mRNA_H-paniculata_contig34049.9097.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34049 379..2367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34049.9097.1 ID=prot_H-paniculata_contig34049.9097.1|Name=mRNA_H-paniculata_contig34049.9097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLR
VFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLS
RNMRFDEGFHRRSHQRSRDPAIPRPRRARSVTNTEDQTPASQMSPILPIY
SLPAASANPFSVLSDDDDDESKSDSKMKDVEPAVEDAPSAGTAAPASQGN
TTKQSGTEAQRPRDRSPIGERARASENREEDPCATARVAKVEGTGNLTGA
VSEGSRNPRQKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like