mRNA_H-paniculata_contig34049.9097.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 181 bits (459), Expect = 1.350e-44 Identity = 103/251 (41.04%), Postives = 147/251 (58.57%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPV-DKSFEGRRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPSKM-----PIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C C RGK +++ I K + + L+ VHTDI GP+ S G+R+ I F++ YSR + L KSEAL K+F+ +E GL + RSD GGE+ AF+ + ENGIK +AAYTPQQ G+AER RS+ MA M P EA + AV+ LNR+P E+W P ++ +RVFGC AY + ++R KLD+K+ VF+G +++++YR YNPE K + +SR++RFDE
Sbjct: 474 CDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E) HSP 1 Score: 177 bits (450), Expect = 1.360e-43 Identity = 99/251 (39.44%), Postives = 143/251 (56.97%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVD-KSFEGRRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C C GK K K + + LE +HTD+ GP+ KS + ++F++ +SR VY L+ KSE K+F+ + KE+GL IK RSD GGEFT + F ++ +NGI+ + +PQQ GVAER R++ EMA S ++P EA AVY LNR+P + +G E W G P + LRVFG A+ ++R KLDDK+ +F+GYD +++ Y+ YNP+ K +SRN+ FDE
Sbjct: 501 CEGCLLGKQFKMSFPKESSTRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDE 751
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: Q9M197_ARATH (Copia-type reverse transcriptase-like protein n=6 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9M197_ARATH) HSP 1 Score: 176 bits (446), Expect = 6.140e-43 Identity = 98/251 (39.04%), Postives = 142/251 (56.57%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVD-KSFEGRRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C C G K K + + LE +HTD+ GP+ KS + ++F++ +SR VY L+ KSE K+F+ + KE+GL IK RSD GGEFT + F ++ +NGI+ + +PQQ GVAER R++ EMA S ++P EA AVY LNR+P + +G E W G P + LRVFG A+ ++R KLDDK+ +F+GYD +++ Y+ YNP+ K +SRN+ FDE
Sbjct: 502 CEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: V9H0W6_ARATH (Lectin receptor kinase (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=V9H0W6_ARATH) HSP 1 Score: 171 bits (434), Expect = 1.940e-42 Identity = 92/226 (40.71%), Postives = 135/226 (59.73%), Query Frame = 1
Query: 76 LEPVHTDIAGPVD-KSFEGRRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
+E +HTD+ GP+ KS + ++F++ +SR VY L+ KSE K+F+ + KE+GL IK RSD GGEFT + F ++ +NGI+ + +PQQ GVAER R++ EMA S ++P EA AVY LNR+P + +G E W G P + LRVFG A+ ++R KLDDK+ +F+GYD +++ Y+ YNP+ K +SRN+ FDE
Sbjct: 24 VELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 249
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A2Z6P2A8_TRISU (Uncharacterized protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P2A8_TRISU) HSP 1 Score: 172 bits (437), Expect = 8.880e-42 Identity = 99/251 (39.44%), Postives = 143/251 (56.97%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDK-SFEGRRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEM-----APSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C+ C RGK ++ I K+ ++++RLE +H+DI GP+ S +R+ + F++ YSR VY L +KS+A K+F+ + KE I R+D GGEF + F++F NGIK +AAYTPQQ G+AER R++ EM A +P A EA A+Y LNR+P E W T P + ++FGC AY QR+KLDDK+ VF G E+ ++YR YNP K + SR+++F E
Sbjct: 459 CADCLRGKQHRESIPKTSNWKSSKRLELIHSDICGPITPVSNSNKRYVLTFIDDYSRKIWVYYLSNKSDAFECFKKFKCMVEKETSETICCLRTDRGGEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCMLAGKSVPKAFWPEAVNWAIYVLNRSPTAAIKDMTPEEVWSSTKPSVKHFKIFGCIAYAHAPDAQRKKLDDKSVKCVFFGISEETKAYRLYNPITKRIIFSRDVKFVE 709
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A5C7H2W6_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7H2W6_9ROSI) HSP 1 Score: 169 bits (429), Expect = 9.830e-42 Identity = 100/251 (39.84%), Postives = 141/251 (56.18%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDKSFEGR-RFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C+ C GK + PI K + +++L+ +H DI GP+ + + R+ I F++ +SR VY L KSEAL K F+ + KE IK R+D GGEFT + F +F ENGIK +AAYTPQQ GVAER R++ + S K+P EA VY LNR+P + E W G P ++ RVFGC A+V +R KL+DK+ V LG E++++YR YNP K + SR++ F+E
Sbjct: 142 CTDCMIGKQHRDPIPKRSTWRASQKLQLIHADICGPISPTSNSKKRYLICFIDDFSRKTWVYFLVEKSEALVTFKHFKKYVEKEMDACIKCLRTDRGGEFTSQDFNEFCKENGIKRQLTAAYTPQQNGVAERKNRTIMNLVRSMLSEKKIPKTFWPEAVNWTVYILNRSPTLVVKNITPEEAWSGIKPSVEHFRVFGCLAHVHVPDAKRTKLEDKSIACVLLGVSEESKAYRLYNPIAKKIITSRDVVFEE 392
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A2Z6P4L8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P4L8_TRISU) HSP 1 Score: 172 bits (437), Expect = 1.070e-41 Identity = 101/251 (40.24%), Postives = 141/251 (56.18%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDKSFEG-RRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPSKMPIANM-----TEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C+ C +GK + I + + +E+LE VH DI GP+ EG +R+ I F++ YSR VY L +KS+A K F+ + KE GL IK R+D GGEFT F+++ NGIK + AYTPQQ GVAER R+V M S + N+ EA A Y LNR P E W+G P + LRVFGC AY +R KL+DK+ V G E++++YR Y+P +K + +SR++ F+E
Sbjct: 467 CTNCLKGKQHRDVISRRSTWRASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKETGLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTVAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWVEAVNWAFYVLNRCPTSSVKEMTPVEAWYGMKPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEE 717
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A2N9HR09_FAGSY (Integrase catalytic domain-containing protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HR09_FAGSY) HSP 1 Score: 171 bits (434), Expect = 2.330e-41 Identity = 98/251 (39.04%), Postives = 138/251 (54.98%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDKSFEGRR-FAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C C GK S++ K + + L+ VH D+ GP+ S G+ + ++F++ +SR +Y L+ KSE K+F+ + K++ +IK RSD GGEFT F++F NGI+ + +PQQ GVAER RS+ MA S KMP EA AVY NR P R G + W P + LRVFG AY+ Q+R KLDDK+ VF+GYD ++ Y+ YNP K V +SR++ FDE
Sbjct: 488 CEGCLFGKQSRKSFPKEASTRANKPLQLVHADVCGPIKPSSLGKNNYFLLFIDDFSRKTWIYFLKQKSEVFGAFKKFKAFVEKQSDQEIKALRSDRGGEFTSNEFKEFCETNGIRRPLTVPRSPQQNGVAERKNRSILNMARSMLKSKKMPKELWAEAVNCAVYLSNRCPTRSVQGKTPQQAWSRKKPTVSHLRVFGSIAYMHVPDQERSKLDDKSEKYVFIGYDPSSKGYKLYNPSTKKVIVSRDVEFDE 738
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A392M335_9FABA (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M335_9FABA) HSP 1 Score: 166 bits (421), Expect = 3.760e-41 Identity = 96/251 (38.25%), Postives = 139/251 (55.38%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDKSFEG-RRFAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPSK-----MPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
CS C GK ++ I K+ ++A +LE +H+DI GP+ + G +R+ + F++ +SR VY L+ KS A K+F + KE G I R+D GGEF F+ + ENGIK +AAYTPQQ G+AER R++ EM S MP EA ++Y LNR+P E W G + ++FGC AY RRKLDDK+ +FLG E++++YR YNP + + +SR++ F E
Sbjct: 199 CSDCLTGKQHRESIPKTSNWKSARKLELIHSDICGPISPASNGNKRYLLTFIDDFSRKAWVYFLKDKSSAFDYFKKFRTMVEKECGEAIVCLRTDRGGEFNSHEFKDYCEENGIKRQLTAAYTPQQNGIAERKNRTIMEMVRSMLAGKDMPKMFWPEAVNWSIYVLNRSPAAALLDVTPEEAWSGIKSSVKHFKIFGCIAYSHVPDAHRRKLDDKSVKCIFLGISEESKAYRLYNPTTQKIVISRDVVFAE 449
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Match: A0A2N9IUL9_FAGSY (Uncharacterized protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUL9_FAGSY) HSP 1 Score: 171 bits (432), Expect = 3.990e-41 Identity = 98/251 (39.04%), Postives = 138/251 (54.98%), Query Frame = 1
Query: 1 CSACERGKASKQPIKKSPEEQTAERLEPVHTDIAGPVDKSFEGRR-FAIIFVNGYSRMRKVYALRHKSEAL*PLKQFEWDIAKENGLQIKRPRSDHGGEFTGEAFRQFSAENGIKEDFSAAYTPQQYGVAERSWRSVFEMAPS-----KMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRVFGCTAYVMFQSQQRRKLDDKAWFGVFLGYDEDNRSYRTYNPENKSVQLSRNMRFDE 735
C C GK S++ K + + L+ VH D+ GP+ S G+ + ++F++ +SR +Y L+ KSE K+F+ + K++ +IK RSD GGEFT F++F NGI+ + +PQQ GVAER RS+ MA S KMP EA AVY NR P R G + W P + LRVFG AY+ Q+R KLDDK+ VF+GYD ++ Y+ YNP K V +SR++ FDE
Sbjct: 510 CEGCLFGKQSRKSFPKEASTRANKPLQLVHADVCGPIKPSSLGKNNYFLLFIDDFSRKTWIYFLKQKSEVFGAFKKFKAFVEKQSDQEIKALRSDRGGEFTSNEFKEFCETNGIRRPLTVPRSPQQNGVAERKNRSILNMARSMLKSKKMPKELWAEAVDCAVYLSNRCPTRSVQGKTPQQAWSRKKPTVSHLRVFGSIAYMHVPDQERSKLDDKSEKYVFIGYDPSSKGYKLYNPSTKKVIVSRDVEFDE 760 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34049.9097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34049.9097.1 >prot_H-paniculata_contig34049.9097.1 ID=prot_H-paniculata_contig34049.9097.1|Name=mRNA_H-paniculata_contig34049.9097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MAPSKMPIANMTEAARAAVYYLNRAPMRLHNGGALYEKWHGTIPKLDDLRback to top mRNA from alignment at H-paniculata_contig34049:379..2367- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34049.9097.1 ID=mRNA_H-paniculata_contig34049.9097.1|Name=mRNA_H-paniculata_contig34049.9097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1989bp|location=Sequence derived from alignment at H-paniculata_contig34049:379..2367- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34049:379..2367- >mRNA_H-paniculata_contig34049.9097.1 ID=mRNA_H-paniculata_contig34049.9097.1|Name=mRNA_H-paniculata_contig34049.9097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig34049:379..2367- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |