mRNA_H-paniculata_contig34040.9096.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: D7FT29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT29_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.180e-63 Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVGMTWDQLVSWEAQG 330
AFYFSASWCGPCRKYTPQLA LY AK QHKAFEVVFVSLDGDE S RYHAGMPW A+PYDHPFREDFA++KGVNS+PRL+VTGR GQE+ASNAVGMTW+QLV+WEA G
Sbjct: 264 AFYFSASWCGPCRKYTPQLAALYTRAKAQHKAFEVVFVSLDGDEESMDRYHAGMPWPAVPYDHPFREDFASSKGVNSVPRLVVTGRRGQEIASNAVGMTWEQLVTWEAHG 373
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A835YMB1_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB1_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.060e-30 Identity = 59/106 (55.66%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVGMTWDQLVSW 318
A Y SA WCGPCR+YTPQLAQLY AA++ EVVFVSLD E F+ Y A MPW A+PY P R+ A+A VNS+PRL+V G L+ NAVG+ QL W
Sbjct: 225 AIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLW 330
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A6S9IW74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IW74_HETAK) HSP 1 Score: 115 bits (289), Expect = 5.130e-29 Identity = 59/111 (53.15%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVGMTW-DQLVSWEAQG 330
A YFSA WCGPCRK+TPQLA Y K + FEVVFVS DGD S Y + MPWLA+P+D RE + V+ IPRL+V G G +A NAVGM +QLV+ A G
Sbjct: 195 AIYFSAHWCGPCRKFTPQLATFYNQMKAARRPFEVVFVSCDGDAGSMMSYFSEMPWLAVPFDDDKREQIQSDYQVSGIPRLMVVGPGGAIVAENAVGMPLSEQLVTHWASG 305
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: L1IDF0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDF0_GUITC) HSP 1 Score: 115 bits (288), Expect = 6.950e-29 Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVG--MTWDQLVSWEA 324
A Y SASWCGPCR++TPQL+Q Y K+ K FEVVF+S D D SFT Y MPWLA+P+D RE+ A V IP+L++ G +G L NAVG + +L SW A
Sbjct: 215 ALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFTNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIA 324
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A7S0E8P9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8P9_9CRYP) HSP 1 Score: 114 bits (284), Expect = 1.770e-28 Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVG--MTWDQLVSWEA 324
A Y SASWCGPCR++TPQL+Q Y K+ K FEVVF+S D D SF+ Y MPWLA+P+D RE+ A V IP+L++ G +G L NAVG + +L SW A
Sbjct: 192 ALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFSNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIA 301
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A7S4UKE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UKE2_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.220e-27 Identity = 55/107 (51.40%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 7 YFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHP-----FREDFAAAKGVNSIPRLIVTGRDGQELASNAVGMTWDQLV 312
YFSA WCGPCR++TPQLA Y A KK EVVFVSLD DESSF Y+ MPWLA+P+D RED VN IPRL+V G + NAVG + ++
Sbjct: 244 YFSAHWCGPCRQFTPQLANYYNALKKSSNNVEVVFVSLDHDESSFNSYYKSMPWLAVPFDEDDHGNNVREDLQGRFSVNGIPRLVVLNAQGSVVEENAVGKDLNSIL 350
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A7S1EBY5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EBY5_HEMAN) HSP 1 Score: 103 bits (258), Expect = 9.460e-26 Identity = 54/110 (49.09%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVGMTW--DQLVSWEA 324
AFY SASWC PC+++TPQLA Y A+ + FEVVFVS D D++S Y MPW AIPY P RE A V IP+L V GRDG+ + +AV + + L WEA
Sbjct: 70 AFYCSASWCPPCKQFTPQLAAFYNRARAAGRPFEVVFVSCDRDQTSMDSYLGHMPWPAIPYGSPAREAALATLKVQGIPQLTVFGRDGKVVEQSAVQSVFAPNSLDRWEA 179
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A7S1B2A6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B2A6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.280e-24 Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 7 YFSASWCGPCRKYTPQLAQLYLAAKKQ-HKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRL-IVTGRDGQELASNAVGMTWDQLVSWEA 324
Y SA WCGPCR++TP+LA+ Y AAK H + EVVFVS D D + F Y MPWL+IPYD RE+ V IP L ++ GR+G+ L +N VG D + W +
Sbjct: 27 YVSAHWCGPCRQFTPRLAEFYRAAKGAGHVSLEVVFVSADHDAAGFEAYRRSMPWLSIPYDEDSRENIMGLLKVRGIPMLTLIDGRNGRILDNNIVGKPLD-ITLWRS 133
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A2P6TX90_CHLSO (Nucleoredoxin 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TX90_CHLSO) HSP 1 Score: 99.8 bits (247), Expect = 4.170e-24 Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 7 YFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPY-DHPFREDFAAAKGVNSIPRLIVTGRDGQELASNA 285
YFSA WCGPCR +TP LAQ+Y A K +H F V+FVS D + F Y+ MPWLA+P+ D ++ ++ V IPRL++ G DG +AS+A
Sbjct: 41 YFSAHWCGPCRAFTPTLAQVYEAVKAKHDDFVVLFVSADRNPQQFEEYYKSMPWLAVPFQDRALQQQLSSRFSVMGIPRLVIVGPDGAVIASDA 134
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Match: A0A7S3LFW5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LFW5_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.510e-23 Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 1 AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYHAGMPWLAIPYDHPFREDFAAAKGVNSIPRLIVTGRDGQELASNAVG--MTWDQLVSWEA 324
A YFSASWC PCR++TP L Q Y + + FEV+FVS D DE+SF Y MPWLAI Y P R+ A+ VN IP L V G +G +++NAV + + W++
Sbjct: 251 ALYFSASWCPPCRQFTPMLIQFYNSLVASGQPFEVIFVSADRDEASFKEYFKKMPWLAIKYSSPRRQGIQASYQVNGIPNLKVFGPNGNLISANAVQEPLNYSTFQRWQS 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34040.9096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34040.9096.1 >prot_H-paniculata_contig34040.9096.1 ID=prot_H-paniculata_contig34040.9096.1|Name=mRNA_H-paniculata_contig34040.9096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp AFYFSASWCGPCRKYTPQLAQLYLAAKKQHKAFEVVFVSLDGDESSFTRYback to top mRNA from alignment at H-paniculata_contig34040:748..2208+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34040.9096.1 ID=mRNA_H-paniculata_contig34040.9096.1|Name=mRNA_H-paniculata_contig34040.9096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1461bp|location=Sequence derived from alignment at H-paniculata_contig34040:748..2208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34040:748..2208+ >mRNA_H-paniculata_contig34040.9096.1 ID=mRNA_H-paniculata_contig34040.9096.1|Name=mRNA_H-paniculata_contig34040.9096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig34040:748..2208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |