mRNA_H-paniculata_contig34007.9087.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: D7FIR4_ECTSI (Nucleolar GTP-binding protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 6.020e-53 Identity = 94/99 (94.95%), Postives = 94/99 (94.95%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC VLYFIDISEQCGYTIKEQV SLFESIKPLFANKQLLVIANKTDVAPF I
Sbjct: 202 TKSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQV-SLFESIKPLFANKQLLVIANKTDVAPFADI 299
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S1GIK8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIK8_CYCTE) HSP 1 Score: 160 bits (406), Expect = 7.480e-48 Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 2
Query: 98 SLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
SL+VGH DYRYLRWQV+DTPGILDHPLEERNTIEMQA+TALAHL C VLYFIDISEQCGYTI +Q SLF SI+PLFANKQL+V+ NK D P+D +
Sbjct: 2 SLFVGHCDYRYLRWQVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLYFIDISEQCGYTIDQQC-SLFHSIRPLFANKQLIVVVNKIDQQPWDTL 97
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A836CDN0_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN0_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.690e-47 Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SLYVGHMDYRYLRWQVVDTPGILDH LEERNTIEMQAVTALAHLQC VL+ IDISEQCGY I EQ+ LFESIKPLFANKQL+++ANKTDV PFD++
Sbjct: 202 TKSLYVGHMDYRYLRWQVVDTPGILDHALEERNTIEMQAVTALAHLQCCVLFMIDISEQCGYPIAEQL-RLFESIKPLFANKQLIIVANKTDVLPFDQV 299
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S2UXL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXL7_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.090e-47 Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = 2
Query: 113 HMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
HMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC VL+FIDISEQCGYTI++QV SLFESI+PLFANKQL+++A K DV P + +
Sbjct: 1 HMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQCTVLFFIDISEQCGYTIEQQV-SLFESIRPLFANKQLMIVATKIDVMPLEDL 91
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S0K9Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9Z4_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.280e-46 Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SL+VGH DYRYLRWQV+DTPGILDHPLEERNTIEMQA+TALAHL C VL+FIDISEQCGYTI++QV SLF+SI+PLF NKQLL++ NK D P++ +
Sbjct: 54 TKSLFVGHTDYRYLRWQVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLFFIDISEQCGYTIEQQV-SLFKSIQPLFVNKQLLIVVNKIDQQPWNTL 151
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S2BZF7_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZF7_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.780e-46 Identity = 81/99 (81.82%), Postives = 90/99 (90.91%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SL+VGHMDYRYLRWQVVDTPGILDHPL+ERNTIEMQA+TALAHLQC VLYF+DISEQCG+TI +QV +LFE+IKPLFANKQLL+I NK DV FD I
Sbjct: 204 TKSLFVGHMDYRYLRWQVVDTPGILDHPLDERNTIEMQAITALAHLQCCVLYFLDISEQCGFTIAQQV-ALFENIKPLFANKQLLLIVNKIDVVAFDAI 301
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S2KQ92_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KQ92_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.690e-44 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SL+VGH DYRYLRWQV+DTPGILDHPLEERNTIEMQA+TALAHL C VL+F+DISEQCGYTI++QV SLF+SIKPLF NKQLL++ NK D P+D +
Sbjct: 202 TKSLFVGHTDYRYLRWQVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLFFVDISEQCGYTIEQQV-SLFKSIKPLFVNKQLLIVVNKIDQQPWDTL 299
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A7S1UNH0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNH0_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.870e-44 Identity = 73/99 (73.74%), Postives = 85/99 (85.86%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SL+VGH DYRYLRWQV+DTPGILDHPLEERNTIEMQA+TALAHL C VLYF+DISEQCGY I++Q SLF SIKPLFANKQL+++ NK D ++ +
Sbjct: 45 TKSLFVGHCDYRYLRWQVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLYFVDISEQCGYPIEQQC-SLFRSIKPLFANKQLIIVVNKVDQQSWESL 142
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: G8FN64_ANOAR (OBG-type G domain-containing protein (Fragment) n=9 Tax=gambiae species complex TaxID=44542 RepID=G8FN64_ANOAR) HSP 1 Score: 152 bits (383), Expect = 5.110e-44 Identity = 68/97 (70.10%), Postives = 86/97 (88.66%), Query Frame = 2
Query: 98 SLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
SLYVGHMDY+YLRWQV+DTPGILDHPLEERN IEMQA+TA+AHL+ ++Y +D+SEQCG++I+EQ LF+SIKPLFANK L+++ NKTDV FD++
Sbjct: 1 SLYVGHMDYKYLRWQVIDTPGILDHPLEERNVIEMQAITAMAHLRACIMYVMDVSEQCGHSIEEQA-KLFDSIKPLFANKPLVLVLNKTDVLKFDEL 96
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Match: A0A1B6H4L5_9HEMI (OBG-type G domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6H4L5_9HEMI) HSP 1 Score: 155 bits (392), Expect = 5.550e-44 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2
Query: 92 TCSLYVGHMDYRYLRWQVVDTPGILDHPLEERNTIEMQAVTALAHLQC*VLYFIDISEQCGYTIKEQVVSLFESIKPLFANKQLLVIANKTDVAPFDKI 388
T SLYVGH DY+YLRWQV+DTPGILDHPLEERN IEMQAVTALAHL+ VLYF+D+SEQCG++++EQV SL+ SIKPLFANK L+V+ NKTD+ D++
Sbjct: 39 TKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAVLYFLDVSEQCGHSLEEQV-SLYNSIKPLFANKPLMVVCNKTDIVKVDEL 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34007.9087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34007.9087.1 >prot_H-paniculata_contig34007.9087.1 ID=prot_H-paniculata_contig34007.9087.1|Name=mRNA_H-paniculata_contig34007.9087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp MQVTRAEVDVQPYAFTTKVAEVDVQPLRGTHGLPLPSMAGGGHSGHIGSPback to top mRNA from alignment at H-paniculata_contig34007:644..2368- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34007.9087.1 ID=mRNA_H-paniculata_contig34007.9087.1|Name=mRNA_H-paniculata_contig34007.9087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1725bp|location=Sequence derived from alignment at H-paniculata_contig34007:644..2368- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34007:644..2368- >mRNA_H-paniculata_contig34007.9087.1 ID=mRNA_H-paniculata_contig34007.9087.1|Name=mRNA_H-paniculata_contig34007.9087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig34007:644..2368- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |