prot_H-paniculata_contig3400.9085.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3400.9085.1
Unique Nameprot_H-paniculata_contig3400.9085.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
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BLAST of mRNA_H-paniculata_contig3400.9085.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.890e-11
Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = 0 
Query:   13 VPSPAPCFMKKRLTIEATDPEITLPAGHKREGWVALRAKHLRATNSYEERSMLADGSGQAQELCQVFSIKVDDIELRSS 91
            +P P P   KK L I+A D E+ LPAGH    WV   AK L ATNSY  R M  D      E CQV+SI +D + +RSS
Sbjct: 1734 LPPPPPALNKKSLRIKAFDAEVRLPAGHAGASWVTFDAKTLTATNSYGTRRM-GDVPSAKPETCQVWSINLDGLGIRSS 1811
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BLAST of mRNA_H-paniculata_contig3400.9085.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.940e-6
Identity = 36/87 (41.38%), Postives = 42/87 (48.28%), Query Frame = 0 
Query:   22 KKRLTIEATDPEITLPAGHKREGWVALRAKHLRATN-----------------SYEERSMLADGSGQAQELCQVFSIKVDDIELRSS 91
            KK L I+A D E+ LPAGH    WV   AK L ATN                 SY  R M  D S    E CQV+SI +D + +RSS
Sbjct: 1045 KKSLRIKALDAEVRLPAGHAGSSWVTFDAKTLTATNRVAHHAPNDARLAGRSNSYGTRRM-GDISSAKPETCQVWSIALDGVGIRSS 1130
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3400.9085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF5_ECTSI1.890e-1148.10FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYL2_9PHAE1.940e-641.38FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3400contigH-paniculata_contig3400:15080..15551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3400.9085.1mRNA_H-paniculata_contig3400.9085.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3400 15078..15551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3400.9085.1 ID=prot_H-paniculata_contig3400.9085.1|Name=mRNA_H-paniculata_contig3400.9085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
SIDSSVGASTAAVPSPAPCFMKKRLTIEATDPEITLPAGHKREGWVALRA
KHLRATNSYEERSMLADGSGQAQELCQVFSIKVDDIELRSSCT
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