prot_H-paniculata_contig3400.9084.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3400.9084.1
Unique Nameprot_H-paniculata_contig3400.9084.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length522
Homology
BLAST of mRNA_H-paniculata_contig3400.9084.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 5.460e-55
Identity = 193/585 (32.99%), Postives = 260/585 (44.44%), Query Frame = 0
Query:   29 AGSNLL-EDGATTGLVDVEVRWPVAPRVTRQQSSPDDDCRSNFVIDGTVPGLKLTLLDQDCSLLWKVVSDNITAPAAE-------RSGV-VSPTPS-------------------------PESGTRRTGQ------GRLGRR--QLALFPYETKPAVATTFDIRFSLPDIAIDAATMQKTNPQNVPTATLPPPPLSP------------LRKVGSVHSSLVTWRMRRFSNFRSSNELIVENPHLTEIVG---IAGEASVVRELVGPGP----------PNLPGQPSDFRREIFEG--NFAQEDIRNEQPTPKRSQVDEVHGDSQLFSREPGVGGGSISPPQE---QQRSPPRQ------------FRWCKRAWPDGGRSNSFSVQGGGVLFSKPGWGAWRSWINGGGSDGSGSADGGIRTMP-----APQSRWQGLVDYDEEDNTDTGRP--------VVPGVEQTGCRRRDKGETGADSDVPILGEVAGGDDSGD--GQDEATRVLELGSALNVVLTGTTIILEPWNYGDKRQPEGIGGAGGDS--ERRSGNAVVMRAALSLTMTTALFLEGHWAKELHAAGS 512
            AGS LL EDG + G V VE  WP+ PRV   +S   D   SN+V+ G  PGL L L + D S+LW+V+++NI  P  E        SG+ V P  +                         P+      G+       R GRR  QLA+FPYE    +ATTFD+ F LPD+A+ A   + T P +         P +             + +VG V S+L+TWRM RFS+FRSSNE+++  P LTE      ++      R+L+ PG           P +  Q      +I  G    A  D      T        V  D Q         G  ++PPQE      SPP              FRW KR+WPDGGR+NS +V G  VL SK GWG WR W     +  +GS D     +      A Q R Q +     E+ T TG P          P ++ T    +        S++     VA G    D     +   + EL  A +V L+ T +ILEPWNY       G+ G GGD+  E   G AVV+R  +S+ MT+A FL+GHWA +L A+G+
Sbjct: 1837 AGSKLLREDGVSLGEVTVEAWWPMVPRVGGAES---DGVTSNYVVVGRAPGLDLGLHEDDFSVLWQVLAENICGPVPEVVDSLFASSGLAVGPWSAKVDDGEHGSSTNEATDLVNTAWEGKPDKADNARGEHTSAAVSRTGRRRRQLAVFPYEHPSDIATTFDVTFHLPDVALVAHACRDTVPDSRVFGESHAAPNAADVHGGVQTEAGGVVEVGKVRSALLTWRMLRFSDFRSSNEVVMAEPLLTESTRGEELSANDGGNRKLLSPGQIVPLSLCASAPLVGAQVPGATGDIGAGAATAATSDDTGNNIT--------VRTDGQRGRATSDKVGDGVAPPQEGDSDTASPPGSGAPSPGARSGACFRWKKRSWPDGGRTNSLAVSGASVLLSKVGWGRWRVWA----AAATGSGDXXXXXLSPKDESAKQKRQQVVAG---EETTGTGTPGWTSFGEREAPPIDATASAGKVSNSATQGSNLEPAN-VAVGIARADPLAASDTGLIAELAFAFDVNLSETCLILEPWNYDSGCDRSGVCGMGGDNGWEGGDGAAVVVRVDMSMRMTSAFFLDGHWAAKLAASGT 2402          
BLAST of mRNA_H-paniculata_contig3400.9084.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 2.510e-48
Identity = 194/583 (33.28%), Postives = 247/583 (42.37%), Query Frame = 0
Query:   29 AGSNLL-EDGATTGLVDVEVRWPVAPRVTRQQSSPDDDCRSNFVIDGTVPGLKLTLLDQDCSLLWK---VVSDNITAPAAERS---------------------------------------GVVSPTPSPESGTRRTGQGRLGRR--QLALFPYETKPAVATTFDIRFSLPDIAIDA-ATMQKTNPQNVPTATLPPPPLSPLR-----------KVGSVHSSLVTWRMRRFSNFRSSNELIVENPHLTEIV-GIAGEASVV--RELVGPG---PPNL-----------PGQPSDFRREIFEGNFAQEDIRNEQPTPKRSQVDEVHGDSQLFSREPGVGGGSISPPQEQQR-----------SPPRQ----FRWCKRAWPDGGRSNSFSVQGGGVLFSKPGWGAWRSWINGGGSDGSGSADGGIRTMPAPQSRWQGLVDYDEEDNTDTGRPVVPGVEQTGCRRRDK-GETGADSDVPILGE------VAGGDDSGD--GQDEATRVLELGSALNVVLTGTTIILEPWNYGDKRQPEGIGGAGGDS--ERRSGNAVVMRAALSLTMTTALFLEGHWAKELHAAG 511
            AGS LL +DG + G V V+  WPV PRV   +S   D   SN+V+ G  PGL L L + D S+LW+   V+++NI+ P  E +                                       G      +   G      GR GRR  QLA+FPYE    +ATTFDI F LPD+A+ A A         V   +      + +R           +VG V S+L+TWRM RFS+FRSSNE+ +  P LTE   G    AS V  R+L+ PG   P +L           PG   D       G  A     +E    K S    V  D Q         G  ++P QE              SP  +    FRW KR+WP GGR+NS +V G  VL SK GW  WR W                                 +E  TDTG P V    +      D     G  S+    G       VA G  S D     +A  + EL SA +V L+ T +ILEPWN    R   G+ G GGD+  E R G AVV+R  +S+ MTTA FL+GHWA +L A G
Sbjct: 1156 AGSKLLRDDGVSLGEVTVDAWWPVVPRVGGAES---DGVTSNYVVVGRAPGLDLGLHEDDFSVLWQGCEVLAENISGPVPEAADSLFASSGLAVGPWRAKADDNELGISTNEATDLVDTAGEGKSDTANNARGGHTSAAVGRTGRRRRQLAVFPYEHPSDIATTFDITFHLPDVALVAHACRDAVLDSRVFDESHAASNAADVRGGVQTEAGGVVEVGKVRSALLTWRMLRFSDFRSSNEVAMVEPLLTESTRGEELSASDVGDRKLLSPGQIVPLSLCASAPLVGVQVPGAAGDT------GAAAATAATSEDTGNKIS----VRTDGQRGRATSDKVGDGVAPLQEDDSDTVSPLGSRAPSPGARSGACFRWKKRSWPGGGRTNSLAVSGASVLLSKVGWDRWRVWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQE-TTDTGPPGVTSFGEREAPPNDATASAGKLSNSATQGSNLEPANVAVGITSADPLAASDAGMIAELASAFDVNLSETCLILEPWNCDSGRDRSGVCGRGGDNDWEGRDGAAVVVRVDMSMRMTTAFFLDGHWAAKLAANG 1724          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3400.9084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF5_ECTSI5.460e-5532.99FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYL2_9PHAE2.510e-4833.28FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3400contigH-paniculata_contig3400:9565..15028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3400.9084.1mRNA_H-paniculata_contig3400.9084.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3400 9565..15028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3400.9084.1 ID=prot_H-paniculata_contig3400.9084.1|Name=mRNA_H-paniculata_contig3400.9084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=522bp
MDTKAGLGIDPLTGLGTDPGTSPRIDFEAGSNLLEDGATTGLVDVEVRWP
VAPRVTRQQSSPDDDCRSNFVIDGTVPGLKLTLLDQDCSLLWKVVSDNIT
APAAERSGVVSPTPSPESGTRRTGQGRLGRRQLALFPYETKPAVATTFDI
RFSLPDIAIDAATMQKTNPQNVPTATLPPPPLSPLRKVGSVHSSLVTWRM
RRFSNFRSSNELIVENPHLTEIVGIAGEASVVRELVGPGPPNLPGQPSDF
RREIFEGNFAQEDIRNEQPTPKRSQVDEVHGDSQLFSREPGVGGGSISPP
QEQQRSPPRQFRWCKRAWPDGGRSNSFSVQGGGVLFSKPGWGAWRSWING
GGSDGSGSADGGIRTMPAPQSRWQGLVDYDEEDNTDTGRPVVPGVEQTGC
RRRDKGETGADSDVPILGEVAGGDDSGDGQDEATRVLELGSALNVVLTGT
TIILEPWNYGDKRQPEGIGGAGGDSERRSGNAVVMRAALSLTMTTALFLE
GHWAKELHAAGSMPMWVAFSL*
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