prot_H-paniculata_contig3400.9082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3400.9082.1
Unique Nameprot_H-paniculata_contig3400.9082.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length811
Homology
BLAST of mRNA_H-paniculata_contig3400.9082.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 9.660e-67
Identity = 169/392 (43.11%), Postives = 212/392 (54.08%), Query Frame = 0
Query:  240 SAEPQRRSSAVAVEYQLT----SSPQALITTVSVELG-TVRGNWNPRTIAAVWGVRAAL-RSALETNRAAPAADDPEVEAKDLIGESR--GDVEAAGS-------TAAEIAHARSTEIRVGVRHGLEITFNKEREGRQLLIVSATSLDLSVDASSKDNGIDTATV-WEGSVQGLEARDPRLSNVLYSCLIG-------PATRGDAPVRLDFRYAKKRGGGS-------ESLTPEPC---------------WESGDLTISFSESRVVYMQPLWLELIDYLWMGILNPVVLSGSGVTLREIRGG------------RSTGEIRVTLVKPVVVLPGGLMDPGHIALRPSAVRFGTWTGGVNDRDTSPRIEDCSVTGPTARHMILEAPETDIAWG 574
            S  P R +  V  E  +     SS +    +V+VELG  V  NWNP T+ A+WGVR+AL RSA    R     D    E  D  G  R  G    AG        T A      STEI+V  R GLE+ FNK++EGRQL+ VSA SL L+V+ASS     D +TV W+G +  L ARDPR SN+LYS L+G        A + ++PV L FRY+K++   S       + + P                  WES  L++SFSE +VVY QPLWLE+ID+LW G+L   V  GS V+ +E   G            RS  +I+VTL  P VVLPG L DP H+ALRP   RF TWTGG +D    PR+E+CS  GP ARHM +EA ETDI  G
Sbjct: 2114 SGSPSRDTLGVGAESPVAAEEASSGEHCRVSVAVELGGPVTANWNPCTLVALWGVRSALLRSAAGVGRDPDLDDVTPAEEADPGGGDRDPGKATDAGQKMDSRRGTGASPTPTCSTEIQVAARKGLEVMFNKKKEGRQLIGVSAASLALTVEASSGGRATDKSTVVWDGRLDDLTARDPRASNLLYSTLVGRPSPPRPTAQQPESPVSLTFRYSKEKEDESAEGPFVADPIPPAALPQGATAPAEGRVAGPWESSSLSLSFSELQVVYFQPLWLEVIDFLWEGVLGAAVWGGSAVSEKEAEQGAPAATGRGDPGLRSLSQIQVTLSAPTVVLPGSLTDPRHLALRPKKFRFNTWTGGADDSSAPPRLEECSPGGPVARHMAVEAGETDIGLG 2505          
BLAST of mRNA_H-paniculata_contig3400.9082.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 4.960e-57
Identity = 132/300 (44.00%), Postives = 162/300 (54.00%), Query Frame = 0
Query:  339 STEIRVGVRHGLEITFNKEREGRQLLIVSATSLDLSVDASSKDNGIDTATV-WEGSVQGLEARDPRLSNVLYSCLIG-------PATRGDAPVRLDFRYAKKRGGGS-----------------------ESLTPEPCWESGDLTISFSESRVVYMQPLWLELIDYLWMGILNPVVLSGSGVTLREIRGG---------------------------------RSTGEIRVTLVKPVVVLPGGLMDPGHIALRPSAVRFGTWTGGVNDRDTSPRIEDCSVTGPTARHMILEAPETDIAWG 574
            STEI V  R GLE+ FNKE+EGRQL+ +SA SL L+V+ASS     D +TV W+G +  L ARDPR SN+LYS L+G        A + ++PV L FRY+K++G  S                       E     P WES  L++SFSE +VVY QPLWLE+ID+LW G+L   V  GS V   E   G                                 RS  +I+VTL  P VVLPG L DP H+ALRP   RF TWTGG +D    PR+E+CS  GP ARHM +EA ETDI  G
Sbjct: 2907 STEIEVAARRGLEVMFNKEKEGRQLIALSAASLALTVEASSGGCATDKSTVVWDGRLDDLTARDPRASNLLYSTLVGRPSPPRPTAQQPESPVSLTFRYSKEKGDESGEGPYVAYRIPPAALLQGATAPAEGRVAGP-WESSSLSLSFSELQVVYFQPLWLEVIDFLWEGVLGAAVWGGSAVPEEEAEQGAPAATDGSTPADRRTPGAREQERAAADGGDPGLRSLSQIQVTLSAPTVVLPGSLTDPRHLALRPKTFRFSTWTGGADDSSAPPRLEECSPGGPVARHMAVEAGETDIGLG 3205          
BLAST of mRNA_H-paniculata_contig3400.9082.1 vs. uniprot
Match: A0A2D4C487_PYTIN (PDZ domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C487_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 8.450e-7
Identity = 68/283 (24.03%), Postives = 122/283 (43.11%), Query Frame = 0
Query:  265 TTVSVELGTVRGNWNPRTIAAVWGVRAALRSALETNRAAPAADDPEVEAKDLIGESRGDVEAAGSTAAEIAHARSTEIRVGVRHGLEITFNKEREGRQLLIVSATSLDLSVDASSKDNGIDTATVWEGSVQGLEARDPRLS-NVLYSCLIG--------PATRGDAPVR----LDFRYAKKRGGGSESLTPEPCWESGDLTISFSESRVVYMQPLWLELIDYLWMGILNPVVLSG-SGVTLREIRGGRSTGEIRVTLVKPVVVLPGGLMDPGHIALRPSAVRF 533
            T + +    +   WNP +IA ++ + +A   +L+ +     A+ P   + +   E +   E + +T   ++ +R   I  G      +TFNK++  RQLL +SA +   +      D+ +      EG +    A D  L  +  ++ ++G        P+ +G+   R    L F+Y+ +    + S           L ++F   R VY     +EL+DYL+ GIL  +V    +  T   +    +T E R+T  KP ++LP  L  P   AL    +R 
Sbjct:  232 TLIDIRCNVLDVQWNPSSIALLYQILSAYTISLQAHNIXQQANVPFGPSAESEAEXQCSTEVSVTT---VSASRPQVIAKGSLVQFSVTFNKDQIDRQLLQLSAQAATXNFVQMEVDHVLSNRL--EGRLGNSVATDLSLEKHSAFTPMVGLDNAHLELPSRQGNPTTRNEPLLHFKYSWEANASARS----------SLELNFEPVRFVYYHQQLMELVDYLFEGILGAMVAQTLATATQLLLTQDEATVEFRITAKKPTLLLPISLASPNFFALTADTLRL 499          
BLAST of mRNA_H-paniculata_contig3400.9082.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.160e-6
Identity = 64/219 (29.22%), Postives = 93/219 (42.47%), Query Frame = 0
Query:  350 LEITFNKEREGRQLLIVSATSLDLSVD----ASSK--DNGIDTATVWEGSV----QGLEARDPRLSNVLYSCLIGPATRGDAPVRLDFRYAKKRGGGSESLTPEPCWESGDLTISFSESRVVYMQPLWLELIDYLWMGILNPVV----LSGSGV-TLREI---RGGRSTGE--------------IRVTLVKPVVVLPGGLMDPGHIALRPSAVRFGTW 536
            L ++ NKE E R LL + A    LSVD    A+ K  + G   A   + +V    Q L   DP  +N LY+ L  P +  DA               + +L          L +     + VY+QPLWLE++DY++ G+L   +    ++  GV TL +    RGG    +              +   L  PVVVLP     P H++ R   +RF TW
Sbjct: 2312 LRVSLNKEWEERPLLGLRAGPTVLSVDVRGGAAIKRCNGGAAAAAAADVAVSVRLQALRVVDPCSANKLYAELAAPVS--DAGSSSXXXXXXXXPLPTSTLDYVSAAAGSSLRVRLPPMQWVYIQPLWLEVVDYIFEGVLAGAIWGTPMAPDGVSTLSDWVRRRGGAVDADGXXXXXXXXXXXMAVEAVLEAPVVVLPHAYASPAHLSARLDELRFSTW 2528          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3400.9082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JYL2_9PHAE9.660e-6743.11FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FMF5_ECTSI4.960e-5744.00FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A2D4C487_PYTIN8.450e-724.03PDZ domain-containing protein n=1 Tax=Pythium insi... [more]
A0A836C849_9STRA1.160e-629.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3400contigH-paniculata_contig3400:2323..8222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3400.9082.1mRNA_H-paniculata_contig3400.9082.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3400 2321..8222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3400.9082.1 ID=prot_H-paniculata_contig3400.9082.1|Name=mRNA_H-paniculata_contig3400.9082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=811bp
EDCSVGVGTGGGGDGESVRLAESVSQNKPDNTTLNREEAPRVIRAVVATE
TVVSVVSTGLSAQPAALDFRGSGAGITVRIEDDSGMHFIMPQPPPKREKG
AVDAADETGNNADVEAAGVHLPLSVPVAPPQLVVEVGMGEWEFGYARGSL
AAAVANKCGKVDSMQTANAPTNESETVAAEKGASAGMMDDHTNIALSMSI
STLTVIDLMQRVPCHGAFRELLAISAPVSIRREFDLSHRSAEPQRRSSAV
AVEYQLTSSPQALITTVSVELGTVRGNWNPRTIAAVWGVRAALRSALETN
RAAPAADDPEVEAKDLIGESRGDVEAAGSTAAEIAHARSTEIRVGVRHGL
EITFNKEREGRQLLIVSATSLDLSVDASSKDNGIDTATVWEGSVQGLEAR
DPRLSNVLYSCLIGPATRGDAPVRLDFRYAKKRGGGSESLTPEPCWESGD
LTISFSESRVVYMQPLWLELIDYLWMGILNPVVLSGSGVTLREIRGGRST
GEIRVTLVKPVVVLPGGLMDPGHIALRPSAVRFGTWTGGVNDRDTSPRIE
DCSVTGPTARHMILEAPETDIAWGSVPLAQAKSTVGIRSFTSPAAAVIEA
SPAVRRPLLLSPPQLVSSSVETGVGRSRSRFGDYSEDPSVEPSNIAPDQD
GNCADGAGATWYHSLLLEGPADIKAAISIVPMLANVRDNSSSAADSASSS
FSSDGGGGSCHGLVSEAVALIPSDDDDDEWNEVERSRRQKRRQQKQNKSA
GTRVGLGGSTPMVDDVSDDPASAIAAPTTSTVAPTVAQADSGDSSSDNPK
DGAARKQPRVM
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