mRNA_H-paniculata_contig33947.9064.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig33947.9064.1
Unique NamemRNA_H-paniculata_contig33947.9064.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.540e-43
Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETV-DGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAE 294
            Q CPDG PK+LDIVDCTGSGDVDTS ++KG +V T  DG+ ++ GLSGR LRLNP+WTNPSGEWRVGIKRAY LFPK LV RVK ERRK+WDKKHLAAE
Sbjct:   61 QVCPDGSPKVLDIVDCTGSGDVDTSTVLKGGSVTTAADGVREIKGLSGRTLRLNPKWTNPSGEWRVGIKRAYGLFPKLLVTRVKAERRKDWDKKHLAAE 159          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A7S2HF30_9STRA (Subtilisin (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HF30_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.930e-32
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQA 303
            Q  PDG+ KI+DIVDCTGSGDV T+        E  DGI ++T LSGR+LRLN  W NPSGEWR+G+KRAYE +PK LV RVK ER+K W  K   AE+Q+
Sbjct:   23 QVTPDGKKKIIDIVDCTGSGDVSTTTKTAHTTGE--DGIREITALSGRVLRLNGAWDNPSGEWRLGLKRAYEFYPKPLVTRVKNERKKAWLSKQHTAELQS 121          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A2P6TIJ6_CHLSO (Tripeptidyl-peptidase II n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIJ6_CHLSO)

HSP 1 Score: 123 bits (309), Expect = 1.690e-30
Identity = 63/109 (57.80%), Postives = 75/109 (68.81%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRFA 327
            Q   DGRPK++D+VDCTGSGDVDTS +++ D     DG   +TGL+G  LRLNP WTNPSGEWRVG K AYELFP  L  R++ ER+K W +K   A  QAV    RFA
Sbjct:  157 QTTTDGRPKVIDVVDCTGSGDVDTSKVVRADE----DGC--ITGLNGNKLRLNPAWTNPSGEWRVGAKAAYELFPAGLKSRLQKERKKRWAEKQRTAVAQAVAAQARFA 259          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A1Y1IEG1_KLENI (Tripeptidyl-peptidase II n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEG1_KLENI)

HSP 1 Score: 117 bits (293), Expect = 2.410e-28
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1
Query:   13 DGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            +G+PK++D+VDCTGSGDVDTS ++K DA    DG+ +  G SGR LR+NPEW NPSGEW VG+K  +ELF K L  RVK ERRK WD KH  +  + +   + F
Sbjct:   61 EGKPKVIDVVDCTGSGDVDTSKVVKADA----DGMIE--GGSGRQLRVNPEWKNPSGEWHVGVKHLFELFTKGLTERVKKERRKSWDAKHRQSATEELRRLSAF 158          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A250XIK6_9CHLO (Tripeptidyl-peptidase II n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XIK6_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 2.420e-28
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 1
Query:   16 GRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAV 306
            G+PK+LD++DCTGSGDVD S ++K DA    DG  +  G SGR L+L+ +WTNPSGEWRVGIK  Y+LF + LV RVK+ERRK+WD++   A  QAV
Sbjct:  130 GKPKVLDVIDCTGSGDVDMSSVVKADA----DGFIE--GASGRKLKLHTDWTNPSGEWRVGIKHVYQLFSRGLVDRVKSERRKQWDEQQRVAVAQAV 220          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: UPI001CC598AB (tripeptidyl-peptidase 2 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC598AB)

HSP 1 Score: 115 bits (287), Expect = 1.560e-27
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            Q   DG+PKILD+VDCTGSGD+DTS ++K DA    DG   +TG SG  L +NP W NPSGEW VG K  YELF   L  R+K ER+K+WD+K+  A  +A+   N F
Sbjct:  117 QVTSDGKPKILDVVDCTGSGDIDTSKVVKADA----DGY--ITGASGASLVVNPSWKNPSGEWHVGCKLVYELFTDTLTSRLKGERKKKWDEKNQEAVAEALKLLNEF 218          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A7J7N5D0_9MAGN (Chromo domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7N5D0_9MAGN)

HSP 1 Score: 114 bits (286), Expect = 2.110e-27
Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 1
Query:   13 DGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            DG+PKILDI+DCTGSGDVDTS ++  DA    DG   + G SG +L +NP WTNPSGEWRVG K  YE F   L  R+K ER+K+WD+K+  A  +AV   + F
Sbjct:  122 DGKPKILDILDCTGSGDVDTSKVVNADA----DG--HIRGASGALLAVNPSWTNPSGEWRVGYKLVYEFFTDTLTSRLKKERKKKWDEKNQEAIAEAVKQLSEF 219          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: UPI001C4FE37C (LOW QUALITY PROTEIN: tripeptidyl-peptidase 2-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FE37C)

HSP 1 Score: 114 bits (285), Expect = 2.890e-27
Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            Q   DG+PKILD++DCTGSGD+DTS +++ DA    DG   +TG SG  L +NP W NPSGEW VG K  YELF   L  R+K ER K+WD+K+  A  +AV + N F
Sbjct:  118 QVTSDGKPKILDVIDCTGSGDIDTSKVVRADA----DGY--ITGASGASLVVNPSWKNPSGEWHVGCKLVYELFTDTLTSRLKEEREKKWDEKNHEAIAKAVKHLNEF 219          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A1U8L870_GOSHI (tripeptidyl-peptidase 2-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8L870_GOSHI)

HSP 1 Score: 107 bits (268), Expect = 3.030e-27
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 1
Query:   13 DGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            DG+PKILD++DCTGSGDVDTS ++K D     DG  ++ G SG  L +N  W NPSGEW VG K  YELF   L  R+K ER+++WD+K+     +AVL+ + F
Sbjct:   83 DGKPKILDVIDCTGSGDVDTSKVVKADK----DG--RIQGASGASLVVNSSWKNPSGEWHVGYKLIYELFTDTLTSRIKKERKRKWDEKNQEEIAKAVLHLDEF 180          
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Match: A0A2N9EEH6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EEH6_FAGSY)

HSP 1 Score: 109 bits (272), Expect = 3.490e-27
Identity = 56/108 (51.85%), Postives = 71/108 (65.74%), Query Frame = 1
Query:    1 QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRILRLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQAVLYTNRF 324
            Q   DG+PKILD++DCTGSGDVDTS ++K DA    DG   + G SG  L +N  W NPSGEWRVG K  YELF   L  R+K ER+K+WD+K+     +AV + + F
Sbjct:   71 QVTSDGKPKILDVIDCTGSGDVDTSKVVKADA----DGC--IRGASGASLVVNSSWENPSGEWRVGYKLVYELFTGTLTSRLKRERKKKWDEKNQEEIAKAVKHLDEF 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33947.9064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK5_ECTSI3.540e-4376.77Similar to tripeptidylpeptidase II n=2 Tax=Ectocar... [more]
A0A7S2HF30_9STRA4.930e-3259.41Subtilisin (Fragment) n=1 Tax=Dictyocha speculum T... [more]
A0A2P6TIJ6_CHLSO1.690e-3057.80Tripeptidyl-peptidase II n=2 Tax=Chlorella sorokin... [more]
A0A1Y1IEG1_KLENI2.410e-2854.81Tripeptidyl-peptidase II n=1 Tax=Klebsormidium nit... [more]
A0A250XIK6_9CHLO2.420e-2858.76Tripeptidyl-peptidase II n=1 Tax=Chlamydomonas eus... [more]
UPI001CC598AB1.560e-2753.70tripeptidyl-peptidase 2 n=2 Tax=Proteaceae TaxID=4... [more]
A0A7J7N5D0_9MAGN2.110e-2754.81Chromo domain-containing protein n=1 Tax=Kingdonia... [more]
UPI001C4FE37C2.890e-2752.78LOW QUALITY PROTEIN: tripeptidyl-peptidase 2-like ... [more]
A0A1U8L870_GOSHI3.030e-2750.96tripeptidyl-peptidase 2-like n=1 Tax=Gossypium hir... [more]
A0A2N9EEH6_FAGSY3.490e-2751.85Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33947contigH-paniculata_contig33947:683..1858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score159.8
Seed ortholog evalue7e-37
Seed eggNOG ortholog2880.D8LMK5
Preferred nameTPP2
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008240,GO:0009507,GO:0009536,GO:0009987,GO:0010883,GO:0010884,GO:0016020,GO:0016043,GO:0016567,GO:0016604,GO:0016787,GO:0017171,GO:0019538,GO:0022607,GO:0022626,GO:0031090,GO:0031974,GO:0031981,GO:0032446,GO:0032879,GO:0032991,GO:0033218,GO:0036211,GO:0042277,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0048518,GO:0050789,GO:0051259,GO:0051260,GO:0065003,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1905952,GO:1905954,GO:1990904
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
EC3.4.14.10
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03110
Exons2
Model size327
Cds size327
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930046.5055976-CDS-H-paniculata_contig33947:682..8251622930046.5055976-CDS-H-paniculata_contig33947:682..825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33947 683..825 +
1691481124.719246-CDS-H-paniculata_contig33947:682..8251691481124.719246-CDS-H-paniculata_contig33947:682..825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33947 683..825 +
1622930046.5245433-CDS-H-paniculata_contig33947:1674..18581622930046.5245433-CDS-H-paniculata_contig33947:1674..1858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33947 1675..1858 +
1691481124.7323725-CDS-H-paniculata_contig33947:1674..18581691481124.7323725-CDS-H-paniculata_contig33947:1674..1858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33947 1675..1858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33947.9064.1prot_H-paniculata_contig33947.9064.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig33947 683..1858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig33947.9064.1

>prot_H-paniculata_contig33947.9064.1 ID=prot_H-paniculata_contig33947.9064.1|Name=mRNA_H-paniculata_contig33947.9064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
QECPDGRPKILDIVDCTGSGDVDTSHIIKGDAVETVDGIAQLTGLSGRIL
RLNPEWTNPSGEWRVGIKRAYELFPKQLVMRVKTERRKEWDKKHLAAEVQ
AVLYTNRFA
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mRNA from alignment at H-paniculata_contig33947:683..1858+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig33947.9064.1 ID=mRNA_H-paniculata_contig33947.9064.1|Name=mRNA_H-paniculata_contig33947.9064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig33947:683..1858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGAATGTCCCGACGGCCGGCCAAAGATCCTGGATATCGTGGACTGCAC TGGCTCTGGAGATGTTGACACATCACATATAATCAAGGGGGATGCCGTCG AGACCGTGGATGGAATTGCCCAGCTCACGGGGCTATCTGGCAGGTGCCCG CTGCTACGTCCAGTAGATTGTCGATGACGTTCCCGAAGCTATGGCTGACG AAACCAAACCCAGCTAATTTCGACATTCAGAAATTTACCAGAACGTTCTC AGGTGTAGCTGCCGTCCTGGGCGGTGCTGACGCCTTCACAGCAGTATTGT TCTGCTCGATTTTGCGCCAACCGCGCTCATGTATGCTGTGCCACTGCATA CCATGTCTAGGGGTGGGGACTTGGATCGTAGGATTTGCGATATTAACTTG CGTTGATTTTGCTTGCGTTGGGGCACAACGTATTAATAAGCGTGAACCGT GGCAAAAGATGACGTTCATGTATAGTTTTCGGGAAAGTGGCCACCCCACT TCGTAGAGTGCTTTTTTTTGTTTGTATTTATGTCATTATCCGCAAGTGTA TTTGCCGTTGCCGTTGTCCATGAACATGTTGTCGTTGCCGCTGCCAATCA AAGGATGTGCTGCGGATGCGAAGTCTTTGTGCACATAAACTTGTTGTTTC CATTAATGTGTCTGTTATTGCCCATAGAGATCTTGCCACATGCCCGCATT TTTTTTGTCATGAGATGAACACGGGAGTTGTTTTCTGGGTGTGTCATTAC TGGTCAAATATCTTCGACCAGATCAATCACATGTGTGCAAATCCTCTTAC CTGTACGTCTCTCGTTTATGGTCATTTTCCAGGACCGTTCCATTTAACCT CAAGTCCGAAGTGGACAAGACCTTGTGTGTTTGTGTGTTTATTTGATCGG CATTGCCGCGGACACTTCACCTGAACCTAAAGCGGACAAACCATTTTTTT TTTTTTTTCATGTTTATTGTATCGGTGTTGTGTTGTTGTCAGGATCCTTC GTTTGAACCCAGAGTGGACGAATCCTTCTGGGGAATGGCGAGTGGGCATC AAACGCGCCTACGAGCTGTTCCCAAAGCAGCTGGTGATGAGGGTGAAGAC AGAGCGACGAAAGGAGTGGGACAAAAAGCATTTGGCTGCAGAGGTACAGG CAGTACTCTACACCAATCGTTTTGCA
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Coding sequence (CDS) from alignment at H-paniculata_contig33947:683..1858+

>mRNA_H-paniculata_contig33947.9064.1 ID=mRNA_H-paniculata_contig33947.9064.1|Name=mRNA_H-paniculata_contig33947.9064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig33947:683..1858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGAATGTCCCGACGGCCGGCCAAAGATCCTGGATATCGTGGACTGCAC
TGGCTCTGGAGATGTTGACACATCACATATAATCAAGGGGGATGCCGTCG
AGACCGTGGATGGAATTGCCCAGCTCACGGGGCTATCTGGCAGCAGGAAT
GTCCCGACGGCCGGCCAAAGATCCTGGATATCGTGGACTGCACTGGCTCT
GGAGATGTTGACACATCACATATAATCAAGGGGGATGCCGTCGAGACCGT
GGATGGAATTGCCCAGCTCACGGGGCTATCTGGCAGGATCCTTCGTTTGA
ACCCAGAGTGGACGAATCCTTCTGGGGAATGGCGAGTGGGCATCAAACGC
GCCTACGAGCTGTTCCCAAAGCAGCTGGTGATGAGGGTGAAGACAGAGCG
ACGAAAGGAGTGGGACAAAAAGCATTTGGCTGCAGAGGTACAGGCAGTAC
TCTACACCAATCGTTTTGCAGATCCTTCGTTTGAACCCAGAGTGGACGAA
TCCTTCTGGGGAATGGCGAGTGGGCATCAAACGCGCCTACGAGCTGTTCC
CAAAGCAGCTGGTGATGAGGGTGAAGACAGAGCGACGAAAGGAGTGGGAC
AAAAAGCATTTGGCTGCAGAGGTACAGGCAGTACTCTACACCAATCGTTT
TGCA
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