prot_H-paniculata_contig3392.9060.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3392.9060.1
Unique Nameprot_H-paniculata_contig3392.9060.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length325
Homology
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BLAST of mRNA_H-paniculata_contig3392.9060.1 vs. uniprot
Match: D8LDC0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC0_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 4.320e-61
Identity = 157/336 (46.73%), Postives = 196/336 (58.33%), Query Frame = 0 
Query:    3 QEIYKDPDFRNLGQSAVRTSMASIEAVAFLLAQLTLEGQRSAESDIRLKEELAKQRHENGRLTMQMRNQSASAEQKLREADHKLRLREKELADLQQEAYKEKGRKCLAWEKAYGHLRSQMDRGGARGGGYTPPESPRAGAVRGPAGYSMHDGGHGATAGGQG------LPQQQMSSEAGGGMGGRRDARSDSPRTHLRGGTFLGRSDHTCSSGGXXXXXXXXXXXXXXXXXXPMPRPPTARG-----AGLDHASPLLRPH--QSGFSHSVTPSPTFPGQEKPT--RFVSKRPETLLAARGYFQRDTSPSNRIGGSTRAMGGVGRSSGRSGFFPSTK 323
            +E  K+P+  +  Q+A+RT+  + E + FL +Q+ LE QR AE+   LK E+AK +HE GR+TMQMRNQ+A+A+QK RE +HKLR+R KEL DLQ EAYKEK RKC AWEKAY +LRSQ     +RGGG+TPPESPRAGA+RGP+G    +GG G +   QG                G G+ G        PR   R GT    S H+ + G                   P+PRP T+RG     A  D  SP+LRP   Q   SHSVTPSPTF  Q+  +  RF  KRPET +  RGY+ R+ SP NR  G   A GGVG  S  S FFPS+K
Sbjct:   89 EEALKEPNHHSSSQAALRTAELANETLGFLFSQMLLENQRGAEATSVLKGEVAKLKHEQGRVTMQMRNQNAAADQKHREMEHKLRVRTKELVDLQ-EAYKEKNRKCQAWEKAYANLRSQTT-DPSRGGGFTPPESPRAGAMRGPSG--SFNGGQGGSMQHQGPXXXXXXXXXXXXXXXGLGVAGM-------PRPGDRIGT---NSPHSSNRG---VAGYAAGGGRSSRPSWPIPRPNTSRGGSGNGATGDRVSPMLRPRDGQGHSSHSVTPSPTFSAQQGMSGGRFAPKRPETPMEVRGYYSRNASPGNRSSG---AGGGVGARS--SSFFPSSK 402
[Close]
BLAST of mRNA_H-paniculata_contig3392.9060.1 vs. uniprot
Match: A0A6H5JFE1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE1_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 6.960e-30
Identity = 70/119 (58.82%), Postives = 91/119 (76.47%), Query Frame = 0 
Query:    3 QEIYKDPDFRNLGQSAVRTSMASIEAVAFLLAQLTLEGQRSAESDIRLKEELAKQRHENGRLTMQMRNQSASAEQKLREADHKLRLREKELADLQQEAYKEKGRKCLAWEKAYGHLRSQ 121
            QE  K+P++ +  Q+A+RT+  + E + FL +Q+ LE QR AE+   LK E+AK +HE GR+TMQMRNQ+A+A+QK RE +HKLR+R KEL DLQ EAYKEK RKC AWEKAY +LRSQ
Sbjct:  152 QEALKEPNYHSSSQAALRTAELANETLGFLFSQMLLESQRGAEATSLLKGEVAKLKHEQGRVTMQMRNQNAAADQKQREMEHKLRVRTKELVDLQ-EAYKEKNRKCQAWEKAYANLRSQ 269
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3392.9060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDC0_ECTSI4.320e-6146.73RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFE1_9PHAE6.960e-3058.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3392contigH-paniculata_contig3392:3120..8591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3392.9060.1mRNA_H-paniculata_contig3392.9060.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3392 3120..8591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3392.9060.1 ID=prot_H-paniculata_contig3392.9060.1|Name=mRNA_H-paniculata_contig3392.9060.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
CQQEIYKDPDFRNLGQSAVRTSMASIEAVAFLLAQLTLEGQRSAESDIRL
KEELAKQRHENGRLTMQMRNQSASAEQKLREADHKLRLREKELADLQQEA
YKEKGRKCLAWEKAYGHLRSQMDRGGARGGGYTPPESPRAGAVRGPAGYS
MHDGGHGATAGGQGLPQQQMSSEAGGGMGGRRDARSDSPRTHLRGGTFLG
RSDHTCSSGGGGSGSGGNSDGNSNAGSWPMPRPPTARGAGLDHASPLLRP
HQSGFSHSVTPSPTFPGQEKPTRFVSKRPETLLAARGYFQRDTSPSNRIG
GSTRAMGGVGRSSGRSGFFPSTKY*
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