mRNA_H-paniculata_contig339.9056.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig339.9056.1
Unique NamemRNA_H-paniculata_contig339.9056.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 7.430e-154
Identity = 219/287 (76.31%), Postives = 240/287 (83.62%), Query Frame = 1
Query:    1 RIPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSSKERKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARPDPAHNFDGKIGIWRICVIKTAQRSSKR-------------------RKRG----EEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKRVVVQQDG 792
            RIPKG LDPIC+RYGV  +YP +LWK VK QID  QE+DLS++ER GRPSLLTP+K+AALK VNSQNRS TLRQVSDQLTDLGLE+GKDTVRRWF++LGAAK A RIKPSLSDAQKR R+DFI D+VDE  GEYLDQGNVVH+DESWFYLMREKEKVRVF GE+VPG PRV H+SHLPKIMVIVANARPDPAH+FDGKIGIWRICVI+TAQRSSK+                   R R     EEYEFDCTIDAEWYKDWY+DVLLP IK+KMPW RSKRVVVQQDG
Sbjct:   15 RIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDG 301          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6A3GHY1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GHY1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.560e-30
Identity = 90/271 (33.21%), Postives = 136/271 (50.18%), Query Frame = 1
Query:    4 IPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQE-VDLSSKERKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAK--VARRI-KPSLSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRS-KRVVVQQD 789
            +P+GA+  + + +GV +R   ++W+      D +      S   R GRP      ++  L+ V+ Q RS T  + + Q   L            F EL   K  VA  + KP+L++  K +RI F  D VD  T  + +  +VVHVDE  FYL + K +  + P E  P   R++ K H+PK+MV+VA ARP  DP     FDGK+G W     + A+RSS  R  G       T++   Y++   +++LP I+ K P   S +R+ VQQD
Sbjct:   43 VPRGAVRAVAEAFGVHARTVSRVWRRAVSNFDRNGSYASPSQMHRAGRPRADRARELERLRGVDPQQRSTT--RSAAQACFL-------PPTTLFRELRLGKLCVATSVAKPTLTEENKMKRISFSLDHVDPMTHLFDEMEDVVHVDEKLFYLSKVKRRCVLLPDEPKPVI-RLKSKRHIPKVMVLVAVARPRHDPVTGEFFDGKLGTWAFLKHEPAERSSCNRPAGTMVPCPVTVNKTSYREMLTELVLPSIRAKFPGAASGRRITVQQD 303          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6G0WUD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUD8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.500e-24
Identity = 75/267 (28.09%), Postives = 132/267 (49.44%), Query Frame = 1
Query:    4 IPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSS--KERKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPR-VQHKSHLPKIMVIVANARPDPAHNFDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKR--VVVQQD 789
            + +G ++ +C  + V+SR    +WK   +  +  Q  ++ S  K  +GR  +  P+ +    K    ++  T R ++ +              +W N     + +   +P+LSD Q+  R+ F  + VD     Y    +VVH+DE WF++ + + K  ++  E +   PR VQ+KSH+ K+M +VA ARP    ++DGK+G W        QR+SK R+ GE      ++    Y+++  D++LP IK K  W  ++   + VQQD
Sbjct:   29 VSRGIMEEVCSFFSVTSRTGWCIWKRGNESHEVGQAANVRSNIKGHRGRRRVYAPSDIDEKVKAVELHKRQTYRSLAKETGLSEFLLWSYVKAKWMN-----RRSNWARPALSDQQRACRLAFCKNFVDMNYASY----DVVHLDEKWFFMAKIRRKFLLWHDEAM--VPRHVQNKSHITKVMFLVAVARP--RGDWDGKVGCWPFVTKVQGQRTSKNRRAGELVLTPVSVTGAIYREYLCDLVLPAIKNKWVWPSNEHGTIFVQQD 282          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A8J2WWN0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWN0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.450e-24
Identity = 70/193 (36.27%), Postives = 104/193 (53.89%), Query Frame = 1
Query:  214 LRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEE----VPGAPRVQHKSHLPKIMVIVANARPDPAHNFDGKIGIWRICVIKTAQRSSKRR---KRGEEYEFDCTIDAEWYKDWYV--DVLLPEIKKKMPWQRS 765
            L +V  +L DL     ++++RRW   LGA K  + IKP L    K +R+ +  D++D   G   D  + VHVDE WF+ M +    RVFP       +P   R+ HKS  PK+M +VA ARP P +NFDGKIGIW   +++ A+RS K     K   +     T+DA+ Y+      + ++  I++KM W + 
Sbjct:  157 LGKVVKELPDLD-GTSEESMRRWCKALGAKKHRQYIKPLLRLRHKVQRLKWALDEIDGN-GMLSDHKDTVHVDEKWFFQMDDGAVCRVFPDAHGNYTLPPPRRLYHKSRTPKLMFLVAVARPRPEYNFDGKIGIWHFAIVRKAKRSHKATGTVKGVTDIMETYTVDAKVYRKVITGKEGVMEAIREKMWWYKK 347          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6A4FIZ1_9STRA (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FIZ1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.610e-23
Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  331 LSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRS-KRVVVQQD 789
            L++  K +RI F  D VD  T  + D  +VVHVDE  FYL + K +  + P E  P   R++ K H+PK+MV+VA ARP  DP     FDGK+G W     + A+RSS  R  G       T++   Y++   +++LP I+ K P   S +R+ VQQD
Sbjct:    2 LTEENKMKRISFSLDHVDPMTHLFDDMEDVVHVDEKLFYLSKVKRRCVLLPDEPKPVI-RLKSKRHIPKVMVLVAVARPRHDPVTGEFFDGKLGTWAFLKHEPAERSSCNRPAGTMVPCPVTVNKTSYREMLTELVLPSIRAKFPGAASGRRITVQQD 158          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A3L6VGG5_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VGG5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.910e-23
Identity = 76/239 (31.80%), Postives = 120/239 (50.21%), Query Frame = 1
Query:  115 DLSSKE--RKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQV-------DETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPR-VQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKRVVVQQD 789
            DL+SK+  R G+  + +   + AL +    +R  T+R   D  +  GL  G  T+ R        + + R+KP L+ A    R+ F    V       D+ + E+ D  N+VH+DE WF   +++ KV +  GEE+P  PR  + K  +PK+M++ A  RP  D + N  FDGKIG W       AQR+S+ R  G        + A+ Y  + +D ++P +KKK P+   + +V Q D
Sbjct:    4 DLASKKAGRVGKKRVYSKESIVALVRATPHDRRETMR---DMASSTGLSLG--TLHRGLKSGAITRKSSRLKPLLTAANMADRVRFCLSHVRVPVVPVDDGSLEFDDMTNIVHLDEKWFNADKDRRKVYMTEGEELP--PRSCKSKRFIPKVMLLAAVMRPQWDSSGNCIFDGKIGFWAFTEQVPAQRNSRNRPAGTLVTKCVNVTADVYHRFVMDKVIPAVKKKWPFS-DRNIVFQHD 234          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.420e-22
Identity = 87/277 (31.41%), Postives = 136/277 (49.10%), Query Frame = 1
Query:    4 IPKGALDPICQRYGVSSRYPRKLWK-SVKDQIDADQEVDLSSKER--KGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQ----LTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGE---YLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKRVV-VQQD 789
            +P+GA+  + +  G       ++WK  ++ + D D   +++SK R   GR      + + A  +     R  TLR V+      LT L         R   +E   +  +  +KP L+DA  + R++F    +    G+   + D  ++VHVDE WFYL + K    ++  +EV     VQ KSH+ K+M + A ARP  D A    FDGK+G+W   V + A+RSSK R +G       ++ A+ Y+    D +LP I  KMP  RS R + +QQD
Sbjct:   50 LPRGAIVNLAREIGRDRATIMRVWKRGLETRKDGDGAANVASKIRGNSGRKVQRERSDIEAAIRAVPHARRRTLRSVAASVVIPLTTLH--------RHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIY-DDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVWPFVVDEPAKRSSKNRPKGTIETKPVSVTADVYQAMMFDKVLPAIALKMP--RSHRSIRIQQD 315          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A397DXN1_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXN1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.670e-22
Identity = 79/269 (29.37%), Postives = 128/269 (47.58%), Query Frame = 1
Query:    4 IPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSSKE--RKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQV-------DETTGEYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPR-VQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSK 768
            +  GA       +G+  +   K+W    +   AD   DL+SK+  R G+  + +   + AL +    +R  T+R   D  +  GL  G  T+ R        + + R+KP L+ A    R+ F    V       D+ + E+ D  N+VH+DE WF   +++ K+ V  GEE+P  PR  + K  +PK+M++ A  RP  D + N  FDGKIG W       AQ +S+ R  G        + A+ Y  + +D ++P +KKK  +  +K
Sbjct:   34 LSHGAKSLAAAHFGIHRKAVAKIW----NDFMAD---DLASKKAGRVGKKRVYSKESIVALVRATPHDRRETMR---DMASSTGLSLG--TLHRGLKSGAITRKSSRLKPLLTAANMADRVRFCLSHVRVPVVPVDDGSLEFDDMTNIVHLDEKWFNADKDRRKIYVTEGEELP--PRSCKSKRSIPKVMLLAAVMRPQWDSSGNCIFDGKIGFWAFTEQVPAQTNSRNRPAGTLVTKCVNVTADVYHRFVMDKVIPAVKKKWSFSDTK 288          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6A4E0R9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4E0R9_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.290e-22
Identity = 79/276 (28.62%), Postives = 122/276 (44.20%), Query Frame = 1
Query:    1 RIPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSSKERKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVR-RWFNELGAAKVARRI----KPSLSDAQKRRRIDFICDQVDETTGE----YLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARP----DPAHNFDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKRVVVQQD 789
            ++P+GA+     R+G       KLW+           + +     +GRP   T  ++ A  +    +   TLR         GL       R + F  L    V +R+    KP L+     +R  F    V +  GE    ++D  NVVHVDE WFY+ R +    +  GE  P A   ++K+H  K+M +VA ARP         FDGK+G+W +   K A R+SK R +G        +  + Y+      ++P IK+   W   ++V+VQQD
Sbjct:   30 KLPQGAISEAAARFGCHRNTVHKLWRGRAT-------IAVQQHSNRGRPRAFTEGELKAKIEAAPVDSRTTLR---------GLAASTGIPRTQLFRRLKERSVLKRVTVAPKPLLTPEHMAKRRQFARSLVKKLPGERGYEFVDMQNVVHVDEKWFYVHRNRNTYYLTRGETAPRAV-TKNKNHRTKVMFLVAVARPRYDAQQRMTFDGKVGLWPVVETKLAVRNSKNRPKGTPVTTPVEMTKDVYERMLTQHVIPAIKRV--WPDKEQVIVQQD 286          
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Match: A0A6G0PKH1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0PKH1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.750e-21
Identity = 83/271 (30.63%), Postives = 126/271 (46.49%), Query Frame = 1
Query:    1 RIPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSSKERKGRPSLLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTG----EYLDQGNVVHVDESWFYLMREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARPDPAHN----FDGKIGIWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKMPWQRSKRVVVQQD 789
            R+ +GA+    Q +G+      K+W +V+    A   +    +++  R   L+P +VA       Q     LRQ    L        + T++R   +    +   R+KP+L+DA K RRI +   +VD   G          + VHVDE WF L +   K  +   E++P  P   +K ++ KIM + A ARP   ++    FDGKIGIW I    TAQR S  R +        ++    Y+   VD +LP I+ K+P +R   V VQQD
Sbjct:   30 RLLRGAIAAAMQSFGICRNSIVKIW-AVRINARA---LTAPGRQQPKRGRHLSPEEVAE----RVQAVPLCLRQTQRGLA-AATGISRRTLQRHLADGVLRRAVSRVKPTLTDAHKTRRIQWALARVDMPLGARSFRMHHMYDTVHVDEKWFILYKGTTKYYLTAAEQLP-YPSCPNKRYIGKIMFLAAVARPRYDYHRKVDFDGKIGIWPIVEEITAQRISVNRPKSAPVTKSVSMTRVLYRKLLVDKVLPAIRAKLPVRRDTTVFVQQD 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig339.9056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE7.430e-15476.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GHY1_9STRA2.560e-3033.21Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6G0WUD8_9STRA1.500e-2428.09Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8J2WWN0_9STRA2.450e-2436.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6A4FIZ1_9STRA3.610e-2339.24Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A3L6VGG5_9STRA5.910e-2331.80HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Ap... [more]
A0A6A4ZEB5_9STRA1.420e-2231.41Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A397DXN1_9STRA2.670e-2229.37HTH_Tnp_Tc3_2 domain-containing protein n=3 Tax=Ap... [more]
A0A6A4E0R9_9STRA3.290e-2228.62Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6G0PKH1_9STRA1.750e-2130.63Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig339contigH-paniculata_contig339:39064..39861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score114.4
Seed ortholog evalue8.2e-23
Seed eggNOG ortholog38727.Pavir.J15216.1.p
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493,3IN2T@38820,3M2XW@4447
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930045.5988023-CDS-H-paniculata_contig339:39063..398611622930045.5988023-CDS-H-paniculata_contig339:39063..39861Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig339 39064..39861 +
1691481124.4094644-CDS-H-paniculata_contig339:39063..398611691481124.4094644-CDS-H-paniculata_contig339:39063..39861Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig339 39064..39861 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig339.9056.1prot_H-paniculata_contig339.9056.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig339 39064..39861 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig339.9056.1

>prot_H-paniculata_contig339.9056.1 ID=prot_H-paniculata_contig339.9056.1|Name=mRNA_H-paniculata_contig339.9056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp
RIPKGALDPICQRYGVSSRYPRKLWKSVKDQIDADQEVDLSSKERKGRPS
LLTPTKVAALKKVNSQNRSFTLRQVSDQLTDLGLEYGKDTVRRWFNELGA
AKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNVVHVDESWFYL
MREKEKVRVFPGEEVPGAPRVQHKSHLPKIMVIVANARPDPAHNFDGKIG
IWRICVIKTAQRSSKRRKRGEEYEFDCTIDAEWYKDWYVDVLLPEIKKKM
PWQRSKRVVVQQDGG*
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mRNA from alignment at H-paniculata_contig339:39064..39861+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig339.9056.1 ID=mRNA_H-paniculata_contig339.9056.1|Name=mRNA_H-paniculata_contig339.9056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=798bp|location=Sequence derived from alignment at H-paniculata_contig339:39064..39861+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGATTCCCAAGGGTGCGCTGGACCCGATTTGCCAACGGTACGGTGTTAG TTCCCGGTACCCGCGAAAGTTGTGGAAAAGCGTCAAGGACCAGATCGACG CTGACCAGGAGGTCGACCTCTCCAGCAAGGAAAGGAAAGGGCGGCCGTCG CTTCTCACCCCAACAAAGGTTGCGGCGCTCAAGAAAGTCAACAGCCAGAA TCGGTCATTTACCCTCCGGCAGGTGTCCGATCAGCTGACCGATCTCGGGC TGGAGTACGGTAAGGACACCGTGAGGCGGTGGTTCAACGAGTTAGGGGCG GCAAAGGTGGCTCGACGCATCAAGCCGTCCCTTTCCGACGCCCAGAAGAG GCGCCGAATCGACTTCATCTGCGACCAGGTGGACGAGACGACCGGGGAGT ACCTCGACCAGGGAAACGTCGTCCACGTGGACGAGAGTTGGTTTTACCTC ATGAGGGAGAAAGAGAAAGTTCGAGTGTTCCCAGGCGAGGAAGTCCCGGG GGCCCCCCGCGTTCAGCACAAGAGCCACCTTCCCAAGATCATGGTCATTG TGGCAAACGCTCGCCCGGACCCTGCCCACAACTTCGACGGCAAGATCGGC ATCTGGCGGATTTGTGTCATCAAAACCGCCCAGCGATCGTCCAAGAGGAG GAAGAGGGGCGAAGAGTACGAGTTCGACTGCACCATCGACGCGGAGTGGT ACAAGGACTGGTACGTCGACGTGCTTCTGCCTGAGATCAAGAAGAAGATG CCTTGGCAACGTTCAAAGCGCGTGGTAGTGCAGCAGGATGGCGGTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig339:39064..39861+

>mRNA_H-paniculata_contig339.9056.1 ID=mRNA_H-paniculata_contig339.9056.1|Name=mRNA_H-paniculata_contig339.9056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig339:39064..39861+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGATTCCCAAGGGTGCGCTGGACCCGATTTGCCAACGGTACGGTGTTAG
TTCCCGGTACCCGCGAAAGTTGTGGAAAAGCGTCAAGGACCAGATCGACG
CTGACCAGGAGGTCGACCTCTCCAGCAAGGAAAGGAAAGGGCGGCCGTCG
CTTCTCACCCCAACAAAGGTTGCGGCGCTCAAGAAAGTCAACAGCCAGAA
TCGGTCATTTACCCTCCGGCAGGTGTCCGATCAGCTGACCGATCTCGGGC
TGGAGTACGGTAAGGACACCGTGAGGCGGTGGTTCAACGAGTTAGGGGCG
GCAAAGGTGGCTCGACGCATCAAGCCGTCCCTTTCCGACGCCCAGAAGAG
GCGCCGAATCGACTTCATCTGCGACCAGGTGGACGAGACGACCGGGGAGT
ACCTCGACCAGGGAAACGTCGTCCACGTGGACGAGAGTTGGTTTTACCTC
ATGAGGGAGAAAGAGAAAGTTCGAGTGTTCCCAGGCGAGGAAGTCCCGGG
GGCCCCCCGCGTTCAGCACAAGAGCCACCTTCCCAAGATCATGGTCATTG
TGGCAAACGCTCGCCCGGACCCTGCCCACAACTTCGACGGCAAGATCGGC
ATCTGGCGGATTTGTGTCATCAAAACCGCCCAGCGATCGTCCAAGAGGAG
GAAGAGGGGCGAAGAGTACGAGTTCGACTGCACCATCGACGCGGAGTGGT
ACAAGGACTGGTACGTCGACGTGCTTCTGCCTGAGATCAAGAAGAAGATG
CCTTGGCAACGTTCAAAGCGCGTGGTAGTGCAGCAGGATGGCGGTTAGAG
GATTCCCAAGGGTGCGCTGGACCCGATTTGCCAACGGTACGGTGTTAGTT
CCCGGTACCCGCGAAAGTTGTGGAAAAGCGTCAAGGACCAGATCGACGCT
GACCAGGAGGTCGACCTCTCCAGCAAGGAAAGGAAAGGGCGGCCGTCGCT
TCTCACCCCAACAAAGGTTGCGGCGCTCAAGAAAGTCAACAGCCAGAATC
GGTCATTTACCCTCCGGCAGGTGTCCGATCAGCTGACCGATCTCGGGCTG
GAGTACGGTAAGGACACCGTGAGGCGGTGGTTCAACGAGTTAGGGGCGGC
AAAGGTGGCTCGACGCATCAAGCCGTCCCTTTCCGACGCCCAGAAGAGGC
GCCGAATCGACTTCATCTGCGACCAGGTGGACGAGACGACCGGGGAGTAC
CTCGACCAGGGAAACGTCGTCCACGTGGACGAGAGTTGGTTTTACCTCAT
GAGGGAGAAAGAGAAAGTTCGAGTGTTCCCAGGCGAGGAAGTCCCGGGGG
CCCCCCGCGTTCAGCACAAGAGCCACCTTCCCAAGATCATGGTCATTGTG
GCAAACGCTCGCCCGGACCCTGCCCACAACTTCGACGGCAAGATCGGCAT
CTGGCGGATTTGTGTCATCAAAACCGCCCAGCGATCGTCCAAGAGGAGGA
AGAGGGGCGAAGAGTACGAGTTCGACTGCACCATCGACGCGGAGTGGTAC
AAGGACTGGTACGTCGACGTGCTTCTGCCTGAGATCAAGAAGAAGATGCC
TTGGCAACGTTCAAAGCGCGTGGTAGTGCAGCAGGATGGCGGTTAG
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