mRNA_H-paniculata_contig33871.9048.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 189 bits (481), Expect = 4.150e-59 Identity = 84/100 (84.00%), Postives = 93/100 (93.00%), Query Frame = 1
Query: 1 RCAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYTIYHNEV 300
RCA+C+STFG++LKRRHHCRNCGRLVCSACAE FWPR+MLP TYNVDT+EKKVRVCS+C+GAGE FRKA LSG EE AM AFSTGCVNLRVPYTIYHNE+
Sbjct: 57 RCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL 156
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.670e-54 Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query: 1 RCAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYTIYHNEV 300
RCA+C+STFG++LKRRHHCRNCGRLVCSACAE FWPR+MLP TYNVDT+EKKVRVCSTC+ AGE FRKA LSG EE AM AFSTGCVNLRVPYTIYHNE+
Sbjct: 381 RCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL 480
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.220e-33 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 4 CAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYTIYHN 294
CA+C+S FG L +RRHHCRNCGR VC ACA+ WP +MLP TY+ E+K R+C TC E FR ALL+G + A A+ GCVNLR PY+IY N
Sbjct: 37 CALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTYSAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLN 133
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 124 bits (310), Expect = 8.440e-31 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 4 CAICESTFGFLLKRR-HHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYT 282
CA C+S+F + +RR HHCRNCGRLVC+ CA FWP++MLP +Y +TE++VRVC TC+ G+ FR+ALL G + AM A+ TGCVNLR P++
Sbjct: 591 CAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS 684
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.150e-30 Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 4 CAICESTFGFLL-KRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYT 282
CA C+S F +L +RRHHCRNCGRLVC+ CA FWP++MLP +Y +TE++VRVC TC+ G+ FR+ALL G + AM A TGCVNLR P++
Sbjct: 521 CAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS 614
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 3.640e-22 Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 1 RCAICESTFGFLLK--------------RRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYTIYHNEV 300
RCA+C ST ++ +CRNC R+VC C FW RNM+P Y + ++RVC TC+ A E FR ALL G E+AM A+STGCVNL PYT++H E+
Sbjct: 494 RCALCMSTNVSVVHPPGGNNRGNRXXXXXNKNCRNCWRVVCDDCVGTFWARNMVPPRYASERDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGEL 607
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 4.920e-22 Identity = 51/114 (44.74%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 1 RCAICESTF--------------GFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCVNLRVPYTIYHNEV 300
RCA+C ST G +CRNC R+VC C FW RNM+P Y + ++RVC TC+ A E FR ALL G E+AM A+STGCVNL PYT++H E+
Sbjct: 492 RCALCMSTNVSAVHPPGGNTRRNGNSSSSDKNCRNCWRVVCDDCIGTFWARNMVPPRYASEGDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGEL 605
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A7S1CPH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPH2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.300e-21 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 4 CAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGCV-NLRVPYTIY 288
C IC+ TFG + + +HHCRNCG LVCS C+ A WP+ ML + +N+ EK +R+CS C + E FR+AL+ G A+R F G + +L P+ I+
Sbjct: 131 CKICKGTFGLIGRHKHHCRNCGALVCSKCSPARWPKKMLSAGFNLKN-EKMLRICSVCQMSLESFREALMEGNLTAALRVFRRGYIRDLSTPHLIF 225
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A0M0K3E4_9EUKA (Hepatocyte growth factor-regulated tyrosine kinase substrate n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3E4_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 1.010e-12 Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 4 CAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTT-----EKKVRVCSTCHGAGEQFRKALLSGCEEEAMRAFSTGC-VNLR 270
C C FG L++RRHHCRNCG +C AC WP +P+ + V EK VRVC +C GA + FR +L+G AM + G VNLR
Sbjct: 249 CTRCGQGFG-LVRRRHHCRNCGHAMCDACC-LKWPMRSMPALFTVGDGGIAIGEKHVRVCYSCDGAAQAFRIYMLAGDYGGAMNMLNLGANVNLR 341
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Match: A0A1I8J253_9PLAT (Uncharacterized protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8J253_9PLAT) HSP 1 Score: 61.2 bits (147), Expect = 8.500e-9 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 4 CAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEKKVRVCSTCH 180
C +C +TFG L+ RRHHCRNCG LVCS C++ W +LP+ +++ +RVC TC+
Sbjct: 467 CMLCSATFG-LISRRHHCRNCGFLVCSPCSQHTW---VLPAQ-----SDQPLRVCDTCY 516 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33871.9048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33871.9048.1 >prot_H-paniculata_contig33871.9048.1 ID=prot_H-paniculata_contig33871.9048.1|Name=mRNA_H-paniculata_contig33871.9048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp RCAICESTFGFLLKRRHHCRNCGRLVCSACAEAFWPRNMLPSTYNVDTTEback to top mRNA from alignment at H-paniculata_contig33871:1223..2166+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33871.9048.1 ID=mRNA_H-paniculata_contig33871.9048.1|Name=mRNA_H-paniculata_contig33871.9048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=944bp|location=Sequence derived from alignment at H-paniculata_contig33871:1223..2166+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33871:1223..2166+ >mRNA_H-paniculata_contig33871.9048.1 ID=mRNA_H-paniculata_contig33871.9048.1|Name=mRNA_H-paniculata_contig33871.9048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig33871:1223..2166+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |