mRNA_H-paniculata_contig3385.9044.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: D8LM02_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM02_ECTSI) HSP 1 Score: 345 bits (884), Expect = 2.720e-106 Identity = 254/509 (49.90%), Postives = 282/509 (55.40%), Query Frame = 1
Query: 1 MCTPSPAVVDVFRCIESIKVSQSVVAPAISG--AATTGAIPGQRRTQTDDKALRERYRAVLQRRDGGSTAAERVKTLRRMVLSKGEEG-------TPT----GESLQSGQMKQLVNTNTTGICFFSTLLVNTHVPFHCPSLPPGSPANPPRPQGLPGEMEASPSSRPAVGVQVGTSADAAECGGATSAKGENNTNXXXXPAAFDPSVDPEGLRCSLRGLVWKVLLGTIHTDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQ-----GKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQY 1473
M T SPAVVDVFRCIESI+ +S V SG A G+RR+Q D+ALRERY AVLQR+D S+ +ER+KTLRRMVL++G G TPT G ++GQ + TS T PA DP D + CSLRGLVWKVLLGTIHTD++LYIRLV +GPSSEDVKIREDTFRTF DE FRRRV EDKLSRINNA+V LN P AA XXXXXXXXXXXXXXX E A G + G G + GKG YVQGM VLCAPLLFVMPEVDAFYCFN LLN+HMPRYVAANLDGVHAGCALVDR LS VD LFNYLESKFL+A +YAFPLVMSLHAC+PPLEE VKLWD++FSFGVHLEVLICVAQ+
Sbjct: 1 MGTSSPAVVDVFRCIESIEKRRSEVGTKGSGESGAKDEGRRGKRRSQAADRALRERYYAVLQRKDR-SSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGQERXXXXXXXXXXXXXXXXXXX---------------------------------------XXSATSXXXXXXXXXXXXXXXXXT--VSVPA--DPGEDHQ---CSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHP---------------DGGAPVAATAAADTXXXXXXXXXXXXXXXNDKHGGEEHPPKSEDVPRCSNSSIVDKEGAGAEAGGAAP---ATGGATGEGEERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLICVAQH 444
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A5D6XHK7_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHK7_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.770e-59 Identity = 132/360 (36.67%), Postives = 180/360 (50.00%), Query Frame = 1
Query: 562 AAFDPSVDPEGLRCSLRGLVWKVLLGT-IHTDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLL-QDPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
AA DP G CSLRG +WK+ LG D Y L RG S D IR DTFRTF GD F +RVPE+KL+R+ N F+N +G S+ VG +YVQGM +LCAPLL+VMPE DA+Y F +L+ +H P Y+A L GV +GC LVD+ L +D LF++L+S+ ++A++YA PLV+SL AC PPL E++++WD +F+ GVH V++ VA V LR+ LL +D + L+ R PPL +E+LV+ A L+ LP +L+ EIA+HPF
Sbjct: 55 AAAASDADPCGTTCSLRGRIWKLFLGVDAAVDREQYAALAARGASPFDGDIRNDTFRTFRGDPAFAQRVPEEKLARLLNVFIN--------------------------------------------------------------------------------ELGTGGAHDASQ---VGEGHPEHIRYVQGMNILCAPLLYVMPEADAYYTFRQLVMKHCPHYMAPRLQGVESGCLLVDKCLQTLDVDLFHHLKSRGITARIYALPLVLSLFACAPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREQLLHKDMDLMKILSLRFAPPLQSELLVSVALQLLHRLPDELIYEIARHPF 331
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A0P1AU96_PLAHL (Bub2 protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AU96_PLAHL) HSP 1 Score: 215 bits (548), Expect = 6.250e-59 Identity = 129/347 (37.18%), Postives = 177/347 (51.01%), Query Frame = 1
Query: 601 CSLRGLVWKVLLGTIH-TDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ-DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
CSLRG VWK LG + D Y LVGRG S D IR DTFRTF GD F +RVPE+KL R+ N F+N P+ EE + C + P +YVQGM VLCAPLL+V+PE DA++ F +L+ H P Y+A L GV GCALVD+ L +D L+ +L S+ ++AQ+YA PL++SL AC+PPL E++++WD +F+ GVH V++ VA V LR+ LL+ D + L+ R +PPL +++L++ A L+ LP DL+ EIA+HPF
Sbjct: 49 CSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFINELGSSPSEEENSKDGKNG---------------------------------------------------------RCGNLP---------------------SIRYVQGMNVLCAPLLYVLPEPDAYHMFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPDLYRHLASRGITAQIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVILAVAHTVLLREQLLKLDMDLMKVLSLRCVPPLQSDLLISVALQLLHRLPEDLVYEIARHPF 317
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A6H5JUZ1_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ1_9PHAE) HSP 1 Score: 205 bits (522), Expect = 3.630e-58 Identity = 97/117 (82.91%), Postives = 107/117 (91.45%), Query Frame = 1
Query: 1294 VDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQDPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPFTEE 1644
VD LFNYLESKFL+A +YAFPLVMSLHAC+PPLEE VKLWD++FSFGVHLEVL+CVAQ VSLRDTLLQDPNPY HLN RNLPPLDAE+LV+ AFSLIPHLP ++MDEIAQHPF EE
Sbjct: 2 VDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPFLEE 118
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: W2RIC6_PHYPN (Rab-GAP TBC domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RIC6_PHYPN) HSP 1 Score: 213 bits (543), Expect = 9.910e-58 Identity = 128/349 (36.68%), Postives = 177/349 (50.72%), Query Frame = 1
Query: 601 CSLRGLVWKVLLGTIH-TDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNL--NSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ-DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
CSLRG VWK LG + D Y LVGRG S D IR DTFRTF GD F +RVPE+KL R+ N F+N +SP +E A + G+ +YVQGM VLCAPLL+V+PE DA++ F +L+ H P Y+A L GV GCALVD+ L +D L+ +L S+ ++A++YA PL++SL AC+PPL E++++WD +F+ GVH V++ VA V LR+ LL+ D + L+ R PPL +++L++ A L+ LP DL+ EIA+HPF
Sbjct: 63 CSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFINELGSSPGEEKQEDGDNARNGNLPSIRWVA-----------------------------------------------------------FAFWQNNVFFFFNKVGRSRYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPDLYQHLSSRGITARIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREQLLKMDMDLMKVLSLRCAPPLQSDLLISVALQLLHRLPEDLLYEIARHPF 352
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A484E312_BRELC (Rab-GAP TBC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E312_BRELC) HSP 1 Score: 210 bits (535), Expect = 1.950e-57 Identity = 134/360 (37.22%), Postives = 183/360 (50.83%), Query Frame = 1
Query: 580 VDPEGLRCS---LRGLVWKVLLGTIH-TDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVN-LNSPP--PTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ-DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
+D EG R S LRG VWK LG + D Y LVG+G S D +IR DTFRTF GD F +RVPE+KL R+ N F+N L S P TNEE C + P +YVQGM VLCAPLL+V+PE +A++ F +L+ H P Y+A L GV GCALVD+ L +D L+ +L S+ + AQ+YA PL++SL AC+PPL E++++WD +F+ GVH V++ VA V LR+ LL+ D + L+ R +PPL +++L++ A L+ LP DL+ EIA+HPF
Sbjct: 46 LDVEGARTSRNSLRGRVWKAFLGVENDVDMTKYSALVGKGASHYDGEIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFINELGSTPLGETNEEEGELA------------------------------------------------------------RCGNLP---------------------SIRYVQGMNVLCAPLLYVLPEPEAYHMFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPELYRHLTSRGICAQIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREHLLKLDMDLMKVLSLRCVPPLQSDLLISVALQLLHRLPEDLLYEIARHPF 324
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A6A3MEJ8_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MEJ8_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.160e-57 Identity = 130/354 (36.72%), Postives = 177/354 (50.00%), Query Frame = 1
Query: 601 CSLRGLVWKVLLGT-IHTDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVN-LNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ-DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPFTEEGQA 1653
C+LRG VWK LG D Y LVGRG S D IR DTFRTF GD F +RVPE+KL R+ N F+N L S P +E+ D +G +YVQGM VLCAPLL+V+PE DA++ F +L+ H P Y+A L GV GCALVD+ L +D L+ +L S+ ++A++YA PL++SL AC+PPL E++++WD +F+ GVH V++ VA V LRD LL+ D + L+ R PPL +++L+A A L+ LP DL+ +IA+HPF A
Sbjct: 55 CTLRGRVWKAFLGVESDVDMTKYSALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFINELGSNPDRDEKKE------------------------------------------------------------------DGELGGNLPSI---------------RYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLETLDPDLYRHLSSRGITARIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLRDQLLKLDMDLMKVLSLRCAPPLQSDLLIAVALQLLHRLPEDLLYKIARHPFANPDAA 327
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A3M6VHR9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHR9_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.320e-55 Identity = 132/380 (34.74%), Postives = 180/380 (47.37%), Query Frame = 1
Query: 559 PAAFDPSVDPEGLRCSLRGLVWKVLLGTIH-TDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ--------------------DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
P D + D CSLRG VWK LG + D Y LVGRG S D IR DTFRTF GD F +RVPE+KL R+ N F+N P +E+ S+ V V + YVQGM VLCAPLL+V+PE DA++ F +L+ H P Y+A L GV GCALVD+ L +D L+ +L + ++A++YA PL++SL AC+PPL E++++WD +F+ GVH V++ VA V LR+ LLQ D + L+ R +PPL +++LV+ A L+ LP DL+ EIA+HPF
Sbjct: 38 PRDEDSTPDANSSLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDPEFAQRVPEEKLVRLLNVFINELGSDPGDEKQIEGKHAHGGNLPLIR------------------------------------------------------------FENKSKNKSVEVVKMIFLSYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPELYQHLLKRGITARIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREQLLQLYSANTDTKHLCFCYFDTKRDMDLMKVLSLRCVPPLQSDLLVSVALQLLHRLPEDLLYEIARHPF 357
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A1V9Z4N1_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4N1_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.580e-51 Identity = 121/348 (34.77%), Postives = 164/348 (47.13%), Query Frame = 1
Query: 604 SLRGLVWKVLLGTIHTDA---VLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQGKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPRYVAANLDGVHAGCALVDRALSAVDQTLFNYLESKFLSAQLYAFPLVMSLHACIPPLEEVVKLWDSMFSFGVHLEVLICVAQYVSLRDTLLQ-DPNPYHHLNYRNLPPLDAEMLVATAFSLIPHLPRDLMDEIAQHPF 1635
+LRG VWK+LLG + D Y R + GPS D IR DTFRTF GD F RRVPED L R+ NAF++ C+D G R Y QG+ +LCAP L+V+PE DA+ F+ L+ +H PRYVA L GVH C LVDR L +D L+ +L ++ ++A++YA+P+++S ACIPPL E+++LWD + + GVH VL+ A + LR LL D + + LN R PPL+A L+ A L+ LP +L EIA+HPF
Sbjct: 67 TLRGRVWKMLLG-VEDDVDRKQSYRRFIAMGPSKNDADIRNDTFRTFRGDPSFARRVPEDTLVRVLNAFLH-------------------------------------------------------------------EYLSTQGTSCID---GRDEADQPYR-------------YFQGLNILCAPFLYVLPEDDAYAAFSALVTQHCPRYVAPQLAGVHVACGLVDRVLQTLDYKLYKHLMARGITAKIYAYPIILSFFACIPPLPELLRLWDLLLAMGVHCIVLLSAAHVILLRSELLTTDAHLMNKLNLRESPPLNARRLIYLALQLLQRLPEELYFEIARHPF 330
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Match: A0A6H5JMC0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC0_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.690e-51 Identity = 165/423 (39.01%), Postives = 189/423 (44.68%), Query Frame = 1
Query: 1 MCTPSPAVVDVFRCIESIKVSQSVVAPAISG--AATTGAIPGQRRTQTDDKALRERYRAVLQRRDGGSTAAERVKTLRRMVLSKGEEG-------TPTGESLQSGQMKQLVNTNTTGICFFSTLLVNTHVPFHCPSLPPGSPANPPRPQGLPGEMEASPSSRPAVGVQVGTSADAAECGGATSAKGENNTNXXXXPAAFDPSVDPEGLRCSLRGLVWKVLLGTIHTDAVLYIRLVGRGPSSEDVKIREDTFRTFAGDEVFRRRVPEDKLSRINNAFVNLNSPPPTNEETAXXXXXXXXXXXXXAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDAPVGXXXXXXXSRGAVVGVPRQ-----GKGKYVQGMTVLCAPLLFVMPEVDAFYCFNRLLNEHMPR 1227
M T SPAVVDVFRCIESI+ +S V SG +A G+RR+Q D+ALRERY AVLQR+D S+ +ER+KTLRRMVL++G G TPT S + T ++ C X A DP D + CSLRGLVWKVLLGTIHTD++LYIRLV +GPSSEDVKIREDTFRTF DE FRRRV EDKLSRINNA+V LN P AA + A G + G G + GKG YVQGM VLCAPLLFVMPEVDAFYCFN LLN+HMPR
Sbjct: 1 MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGGNSAKDEGRRGKRRSQAADRALRERYYAVLQRKDR-SSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGPEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXSATSXXXXC---XXXXXXXXXXXGTVSAPTDPGEDHQ---CSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHP---------------DGGAPVAATAAADTVRRGSEGQGREGSGSKDKHGGEEQPPKSEDVPRCSNPAIVHKDGAGAEAGGAAP---ASGGATGEREERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPR 390 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3385.9044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3385.9044.1 >prot_H-paniculata_contig3385.9044.1 ID=prot_H-paniculata_contig3385.9044.1|Name=mRNA_H-paniculata_contig3385.9044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=574bp MCTPSPAVVDVFRCIESIKVSQSVVAPAISGAATTGAIPGQRRTQTDDKAback to top mRNA from alignment at H-paniculata_contig3385:8832..16748+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3385.9044.1 ID=mRNA_H-paniculata_contig3385.9044.1|Name=mRNA_H-paniculata_contig3385.9044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7917bp|location=Sequence derived from alignment at H-paniculata_contig3385:8832..16748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3385:8832..16748+ >mRNA_H-paniculata_contig3385.9044.1 ID=mRNA_H-paniculata_contig3385.9044.1|Name=mRNA_H-paniculata_contig3385.9044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3444bp|location=Sequence derived from alignment at H-paniculata_contig3385:8832..16748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |