mRNA_H-paniculata_contig33795.9034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig33795.9034.1
Unique NamemRNA_H-paniculata_contig33795.9034.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: D8LTJ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ9_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.720e-56
Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 1
Query:   22 DWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEKG 345
            DWAT+SL+WLSSQQALADL++FHG++S+ EGL G EKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSP+ AQLDFPQYAEVMRDSLA G D VGGSEECASAVE G
Sbjct:  159 DWATDSLRWLSSQQALADLSSFHGFLSDKEGLTGAEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPMKAQLDFPQYAEVMRDSLASGVDGVGGSEECASAVEAG 266          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S3HIP1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIP1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.290e-30
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1
Query:   22 DWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEKGEK 351
            D++TE L+WL+++QAL D+AAFH +IS+   L    +WVTWGGSYPGMLA  ARL++PHL +A+VSSSSPL A +D P Y  V+ +S+AD   DVGGS+ C  A+  G K
Sbjct:  142 DYSTEHLQWLNTEQALGDIAAFHTFISKKFNLPANARWVTWGGSYPGMLAALARLRFPHLIYASVSSSSPLQAAVDMPGYNNVVAESMADK--DVGGSQACLDAIVAGHK 249          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S1EZH2_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EZH2_NOCSC)

HSP 1 Score: 115 bits (289), Expect = 3.170e-28
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   13 SLQDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEKG 345
            S+ D +TESL++LSS+QALADLA F+ + + +  L    KW+T+GGSYPGMLAGWARLKYP  FH A+SSS+P+ AQ+++  Y +V   SLA     VGGS  CA  +E+G
Sbjct:  130 SVSDLSTESLRFLSSRQALADLAKFNEFATASYNLSSDAKWITFGGSYPGMLAGWARLKYPTHFHGAISSSAPVRAQVNYQGYLDVTAQSLAQRR--VGGSIRCAGIIEQG 238          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A0L0GE81_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GE81_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 3.670e-28
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
Query:   19 QDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAV 336
            + + TE L++LSS+QALADL+AFH +I +   L    KWVTWGGSYPGMLA WARLKYPH FHA+++SS+P+ A+ DF  Y  V+  ++A  E  VGGS+EC + +
Sbjct:  138 KSFETEDLRYLSSKQALADLSAFHTHIVKRFRLSSKNKWVTWGGSYPGMLAAWARLKYPHQFHASIASSAPVRAEYDFQGYYNVVGQAIA--EPLVGGSDECRTII 241          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S2F9A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F9A8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.190e-28
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 1
Query:   34 ESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVM 273
            ++LKWLSSQQALADLA FHG I     L    KWV +GGSYPGM+AG+ RLKYPHL HAAVSSSSP LA+LD  +Y +V+
Sbjct:   21 KNLKWLSSQQALADLATFHGQIMVNYSLTSSNKWVAFGGSYPGMMAGFFRLKYPHLVHAAVSSSSPWLAKLDMNEYQDVV 100          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S0W8A9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W8A9_9CRYP)

HSP 1 Score: 115 bits (289), Expect = 7.340e-28
Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 1
Query:   22 DWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAV 336
            D +T+SL++LS++QAL D+A+FH +IS+T GL    +WV +GGSYPGMLA W+R KYPHLFHAAVSSS+PL A  +  QY +V+  +LAD   DVGGS  C   V
Sbjct:  154 DLSTDSLRFLSAEQALEDIASFHAHISDTYGLPARARWVAFGGSYPGMLAAWSRSKYPHLFHAAVSSSAPLRAVSNMYQYNDVVARALADR--DVGGSPTCLRRV 256          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7R9U637_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U637_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.510e-27
Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1
Query:   10 FSLQDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEK 342
            + ++D +TE+L++LSSQQALAD+A  H  I++  GL    +W+TWGGSYPGM+A WAR KYPHL  A+V+SS+P+ A L+   Y EV+  +LA     +GGS EC + V++
Sbjct:   42 YPVEDLSTENLQYLSSQQALADIANLHMLITKEYGLASQNRWITWGGSYPGMMASWARYKYPHLIFASVASSAPVQAVLENKGYNEVIAKALATTS--IGGSAECLAVVKE 150          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S0EST3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EST3_9CRYP)

HSP 1 Score: 113 bits (282), Expect = 5.010e-27
Identity = 54/108 (50.00%), Postives = 79/108 (73.15%), Query Frame = 1
Query:   19 QDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEK 342
            +D + E++K+LSS+QALAD+A+FH YIS    +   ++W+T+GGSYPGMLA W+  KYPHLFHAAVSSS+P+ A L+   Y +V+    AD  + +GGS EC + +++
Sbjct:   98 RDLSVENMKYLSSRQALADIASFHSYISSAFAISSKQRWITFGGSYPGMLAAWSHAKYPHLFHAAVSSSAPVQAILNMKGYNDVVASDFAD--EMLGGSAECLNTIKE 203          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S2PMK7_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PMK7_9DINO)

HSP 1 Score: 112 bits (281), Expect = 5.590e-27
Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1
Query:   37 SLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAVEKGEKR 354
            +L++ SS+QAL D+A+F  + +E  GL G  KWVTWGGSYPGMLAGWARLK+PHL HAAV+SS+P+ A+LD   Y +V+ ++ A   + VGGS  C  A+ KG ++
Sbjct:   83 ALRYHSSRQALGDIASFIQFANEAYGLHG-NKWVTWGGSYPGMLAGWARLKFPHLVHAAVASSAPVRAELDMRGYNDVVAEAYAVEHERVGGSAACHDAIRKGHQQ 187          
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Match: A0A7S1TSG3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSG3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.940e-27
Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 1
Query:   10 FSLQDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGGSYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGEDDVGGSEECASAV 336
            + ++D +TE+L++LSSQQALAD+A FH + S   GL    +WVTWGGSYPGM+A WAR KYPHL  AAV+SS+P+ A L+   Y  V+ D++A+  + +GGS+ C   V
Sbjct:   69 YPVEDLSTENLRFLSSQQALADIANFHVHASAEFGLTSANRWVTWGGSYPGMMASWARYKYPHLIFAAVASSAPVQAVLNMQGYNNVVADAIAN--ERIGGSKACRDTV 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33795.9034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ9_ECTSI2.720e-5685.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HIP1_9STRA1.290e-3055.45Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1EZH2_NOCSC3.170e-2854.05Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A0L0GE81_9EUKA3.670e-2854.72Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S2F9A8_9STRA4.190e-2866.25Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0W8A9_9CRYP7.340e-2857.14Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7R9U637_9STRA1.510e-2749.55Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0EST3_9CRYP5.010e-2750.00Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S2PMK7_9DINO5.590e-2753.77Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S1TSG3_9STRA6.940e-2751.38Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33795contigH-paniculata_contig33795:344..1378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.7
Seed ortholog evalue4.9e-47
Seed eggNOG ortholog2880.D8LTJ9
Preferred namePRSS16
KEGG koko:K09649
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005773,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009057,GO:0012505,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0031410,GO:0031982,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0097708,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.serine-type peptidase activity
EggNOG OGsKOG2182@1,KOG2182@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons2
Model size366
Cds size366
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930042.2423136-CDS-H-paniculata_contig33795:343..4911622930042.2423136-CDS-H-paniculata_contig33795:343..491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33795 344..491 +
1691481122.8248038-CDS-H-paniculata_contig33795:343..4911691481122.8248038-CDS-H-paniculata_contig33795:343..491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33795 344..491 +
1622930042.2601144-CDS-H-paniculata_contig33795:1160..13781622930042.2601144-CDS-H-paniculata_contig33795:1160..1378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33795 1161..1378 +
1691481122.8352535-CDS-H-paniculata_contig33795:1160..13781691481122.8352535-CDS-H-paniculata_contig33795:1160..1378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33795 1161..1378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33795.9034.1prot_H-paniculata_contig33795.9034.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig33795 344..1378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig33795.9034.1

>prot_H-paniculata_contig33795.9034.1 ID=prot_H-paniculata_contig33795.9034.1|Name=mRNA_H-paniculata_contig33795.9034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MGVFSLQDWATESLKWLSSQQALADLAAFHGYISETEGLGGGEKWVTWGG
SYPGMLAGWARLKYPHLFHAAVSSSSPLLAQLDFPQYAEVMRDSLADGED
DVGGSEECASAVEKGEKRTVVI
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mRNA from alignment at H-paniculata_contig33795:344..1378+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig33795.9034.1 ID=mRNA_H-paniculata_contig33795.9034.1|Name=mRNA_H-paniculata_contig33795.9034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1035bp|location=Sequence derived from alignment at H-paniculata_contig33795:344..1378+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGTCTTTTCTTTGCAGGACTGGGCTACGGAGTCTTTAAAATGGTT GAGTAGCCAGCAGGCTTTGGCTGACTTGGCAGCCTTTCATGGCTACATCT CCGAAACGGAGGGACTAGGCGGCGGGGAAAAGTGGGTGACTTGGGGAGGT GAGAGTTGCCAAGATAAAAAATAGACACTAATGGATGTAGAAGCAGCTGG GTACTGCCACCACCCTGACGATCGCTAACACTTGACTGTCAGGCAGAAGT ATAAGATATCGTGTTTTTTGCCGAGCGTAGCATGGTGTAAAAAACCCGTC GACCCACCAACCTTCCCACGTGCATCTTTCTCTTTTTGTATGTTTTTTTT GTTCGCGTTCATCCAATTAATCGACGCAAAATACAGGGACTATGCAGCAA ATAACTTACATTGTTTACGGGGCAAATTAAGGCGTTTTACCTTCGTCTTA TGTTTCCATTATAGCCGTAGTAAGGAGCCTGGGGGGGAACCGATGGTCCG CGAGCATGTTAGTGTGATCGATCAGGGTGCCTGTACACCGATCCGCAACG TGTACCTCGGGTCATGTTTGTCCGCTAGCTGTTTCTTGTCTATCGGGCAA ACGCTTGGATTCATGACCTCCCACGTCGGAGTAGATCAGATCGATTGTGA GAAAAGTTGTCTTGTACCTGATAGGAACAGAGCTCCGTCCTCCGGAGGAT GCGTGGTCAATGGTCTAACCGCTACGGCATGAAAAACATGAACCTTCCCC CTCCCTTGCTCCACCTACCTCGTTGTCGGATTCATCGACGCGCTATCTAC ACGTGCTACTTTTGCAGGGTCATATCCAGGTATGCTTGCAGGGTGGGCGC GACTCAAGTACCCGCATCTGTTTCACGCTGCAGTGTCCTCTTCCTCGCCT CTCCTGGCTCAGCTCGATTTTCCGCAATACGCCGAGGTCATGCGCGATTC GCTTGCCGACGGGGAGGACGATGTTGGGGGATCGGAGGAGTGCGCTTCGG CTGTCGAAAAAGGTGAGAAAAGAACTGTCGTTATC
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Coding sequence (CDS) from alignment at H-paniculata_contig33795:344..1378+

>mRNA_H-paniculata_contig33795.9034.1 ID=mRNA_H-paniculata_contig33795.9034.1|Name=mRNA_H-paniculata_contig33795.9034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig33795:344..1378+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGTCTTTTCTTTGCAGGACTGGGCTACGGAGTCTTTAAAATGGTT
GAGTAGCCAGCAGGCTTTGGCTGACTTGGCAGCCTTTCATGGCTACATCT
CCGAAACGGAGGGACTAGGCGGCGGGGAAAAGTGGGTGACTTGGGGAGAT
GGGCGTCTTTTCTTTGCAGGACTGGGCTACGGAGTCTTTAAAATGGTTGA
GTAGCCAGCAGGCTTTGGCTGACTTGGCAGCCTTTCATGGCTACATCTCC
GAAACGGAGGGACTAGGCGGCGGGGAAAAGTGGGTGACTTGGGGAGGGTC
ATATCCAGGTATGCTTGCAGGGTGGGCGCGACTCAAGTACCCGCATCTGT
TTCACGCTGCAGTGTCCTCTTCCTCGCCTCTCCTGGCTCAGCTCGATTTT
CCGCAATACGCCGAGGTCATGCGCGATTCGCTTGCCGACGGGGAGGACGA
TGTTGGGGGATCGGAGGAGTGCGCTTCGGCTGTCGAAAAAGGTGAGAAAA
GAACTGTCGTTATCGGTCATATCCAGGTATGCTTGCAGGGTGGGCGCGAC
TCAAGTACCCGCATCTGTTTCACGCTGCAGTGTCCTCTTCCTCGCCTCTC
CTGGCTCAGCTCGATTTTCCGCAATACGCCGAGGTCATGCGCGATTCGCT
TGCCGACGGGGAGGACGATGTTGGGGGATCGGAGGAGTGCGCTTCGGCTG
TCGAAAAAGGTGAGAAAAGAACTGTCGTTATC
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