mRNA_H-paniculata_contig3379.9033.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.100e-106 Identity = 164/351 (46.72%), Postives = 214/351 (60.97%), Query Frame = 2
Query: 317 YEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGLWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCMHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAPTANDPVPAPFPSSDEEPLFFPEPSSDDTCAEEVMGYEECGGT----GQCCMAGYECRELKAGCYSQCQP 1357
+E +E P +++ G + RGM TDP +LAEYG+G WPL+WAYEKGEMA NGNY E + R G+CGDP Q+ G N Y TPN W +L Y+EG ++ + TA HWGH E+ ICNAD++ DP+GI +EC N +PL R +G ++SPIDP++PGRYY DP C G+ P GA G ++ YQLP GLTC C+++M +YTG+ CKH GY+EFE +SWPS CAP K DW+ D CG++ +YP+EF CAD AI P G + P PAP EP +D C + V Y++CGG CC GYEC E+ A CYSQC+P
Sbjct: 11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGAN----FYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGEN-GSYPEEFWACADFAITPDGMAN--------PTPAPT-----------EPLAD--CLDPVGPYDQCGGEDYEGSDCCREGYECTEM-ASCYSQCRP 334
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 298 bits (764), Expect = 7.560e-85 Identity = 136/290 (46.90%), Postives = 182/290 (62.76%), Query Frame = 2
Query: 293 SKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGLWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCMHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAP 1162
S + +D++ LE A+++ GQ + R TDP +LAEYG+G +PL+W Y+KGEMA NGNY EP G+ VR GVCGDP+ G++ E Y TPN W VL E+++G + + V A H+GH E+ IC+ DL DP+ + T+EC N +PL R +G G +SPIDP++PGRYYADPPC + + A G +MT Y LP L C HCV++M +YTGHKC HPGY+EF +SW S CAPNK DW+ I+ CGD+ +EF C+DIAI P P
Sbjct: 2 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQD-GENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAETNWCLPCP 290
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 285 bits (729), Expect = 1.680e-83 Identity = 156/384 (40.62%), Postives = 211/384 (54.95%), Query Frame = 2
Query: 251 HSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGL-WPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPC--MHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAPTANDPVPAPFPSSDEEPLFFPEPSSDDTCAEEVMGYEECGGTG-----------QCCMAGYECRELKAGCYSQCQPT 1360
H Y + P+SRS+ S++F D D + P+ ++++G GT+ RG+E DPD+L +G G +PL + +A NGNY EP + VR GVCGDP Q P G N Y T +S W L Y G ++ F V A HWGH E+ ICNAD+ DP+GI T+EC N +PL R +G D+SPIDP+FPGRYY DP C G+ P A G+ M +Y LP + C+HC+++M ++TG+ C H GY+EF SWPS CAPNKEDWV T E CG YP+EF C+D +I T +P P+ P + CAEE + +CGG G CC++G C K +S+C+PT
Sbjct: 19 HIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNT----YSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLP-DIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQG-GYYPEEFWACSDFSITRDATPPSPTPSVET---------------IPPVNEPTECAEE---WGQCGGAGGGAVDGVWTGPTCCVSGTTC-SYKDEWWSECRPT 371
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 273 bits (697), Expect = 1.650e-78 Identity = 157/395 (39.75%), Postives = 212/395 (53.67%), Query Frame = 2
Query: 215 LMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGL-WPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCM--HGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAPTANDPVPAPFPSSDEEPLFFPEPSSDDTCAEEVMGYEECGGTG-----------QCCMAGYECRELKAGCYSQCQP 1357
L+AA + A H Y + P+SRS+ S++F D D + P ++++G GT+ RG E DPD+LA++G G+ +PL + A NGNY EP + VR GVCGDP Q+ P G N Y T +S W LT ++ G + F V A HWGH E+ ICNAD+ DPNGI T+EC N +PL R +G +SPIDP FPGRYY DP C G+ P A G+ M +Y LP + C+HC+++M ++TG+ C H GYD+F+ SWP CA KE WV T +E CG YP+EF C+D +I G PSS P + CAEE +++CGG G CC+ G C K +S C+P
Sbjct: 9 LLAAALRKA-QGHIYQLYPMSRSFANSESFLDMDDPNFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNT----YSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLP-DIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQE-GYYPEEFWACSDFSITSDGP----------------PSSTXXXXXXPAVTEPTGCAEE---WQQCGGAGGDAVGGVWTGPTCCVPGTTCY-YKDVYWSDCRP 370
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 272 bits (695), Expect = 2.360e-77 Identity = 150/359 (41.78%), Postives = 197/359 (54.87%), Query Frame = 2
Query: 215 LMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGLWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLA-DPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCMHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSG-TGSAPAPTANDPVPAPFPSSDEEPLFFPEPSSDDTCAEEVMGYEECGG 1285
L AATV +A +Y++ P SR S F + E E P +S G + +G+ T+ LLAEYG+G WPL AY KGEM NGN+ E + R G+CGDP+Q S N Y + S WS L +EGG++ + V GH E+ ICN+ DL P +EC NM+PL R +G +SPIDP++PGRYY +PPC + P GA G ++ +YQLP GLTC HCV++M YTG+ CKH GYD+FE SWPS CAP K +W+ TD CG AYP+E C+DI+I G T + +P D P P S P+ P P+ E +G E GG
Sbjct: 10 LAAATVITRAEAGTYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNA----YSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCG-MAGAYPEEHWSCSDISITTDGPTEKSSSPVEPD---TPPPLSTATPVATPSPT-------EALGANEGGG 353
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE) HSP 1 Score: 250 bits (639), Expect = 7.450e-71 Identity = 128/330 (38.79%), Postives = 185/330 (56.06%), Query Frame = 2
Query: 170 MSTATTAMAAIALAALMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEG-LWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCM----HGDQTGL-----FPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAI 1129
M+ A A + + A+ P AV+ H +++ P+SR Y RSK FND D ++E +F+ G + R ++ DPD+LA+YG G +W + A++KGE N NY E + V GVCGDP P G ++ Y TPN+ W ++ Y+ G II + V +HWGH EY +C+ D+ DP+G++T++CLNM+PL+R + +SPIDP +PGR++ +P C DQTG G G I +Y LP + C HCV++M +Y C HPGY EFE WP CAP+KEDW+ C D + F GC+DI +
Sbjct: 43 MTPAPFAPGMMGVVAVFGMLAPAAVEGHGFVIEPISRQYLRSKEFNDGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDP----PQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFE-PEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 256 bits (655), Expect = 9.510e-69 Identity = 131/329 (39.82%), Postives = 185/329 (56.23%), Query Frame = 2
Query: 233 PHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEG-LWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCM----HGDQTGL-----FPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAPTANDPVPAP 1189
P AV+ H + + P+SR Y RSK FN+ D ++E +F+ G + R ++ DPD+LA+YG G +W + A++KGE N NY E + V GVCGDP P G ++ Y TPN+ W ++ Y G II + V +HWGH EY +C+ D+ DP+G++T++CLNM+PL+R + +SPIDP +PGR++ +P C DQTG G G I +Y LP + C HCV++M +Y C HPGY EFE WP CAP+KEDW+ C D + F GC+DI ++ G S+ AP A P P P
Sbjct: 22 PAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDP----PQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFE-PEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEP 344
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 259 bits (663), Expect = 2.900e-68 Identity = 137/336 (40.77%), Postives = 190/336 (56.55%), Query Frame = 2
Query: 203 ALAALMAATVPHAVDAHSYMMN--PVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEG-LWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCMHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAP--TANDPVPAPFP 1195
A AA +AA A AH ++M P+SR Y F + D+ ++ P+ +++ G + R KTDP +L EYG G +PL + G+ A NGNY E + R G+CGDP Q++ G N Y T N GW VL ++ G ++ + + A HWGH E+ +CNAD++ DP+G+ T+EC N +PL R GD SPIDP++PGRYY DP C G+ P GAP+G + +Y LP + C CV++M H GYDEF+ SWPSTCAPNK DW+ + CG+ AYP+EF C+DI++ G+ P P T PVP P
Sbjct: 7 AFAAAVAAATLLANHAHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYF----GDFADNGNYLETDEIAKRHGICGDPEQNADEGSNV----YSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETEQGSPEGAPKGYNIKMRYVLP-DIECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGEE-GAYPEEFWACSDISLTSDGSAPPPTPYTTPTTPVPVAAP 323
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 245 bits (626), Expect = 3.290e-68 Identity = 130/324 (40.12%), Postives = 177/324 (54.63%), Query Frame = 2
Query: 212 ALMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEGL-WPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCMHGDQTGLFPPGAPRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTGSAPAPTANDPV 1180
A +AA AH P+SR R F D +E P+ +++ G + + R + D L YG G +PL + GE A NGNY E + R GVCGDP Q++ G N Y T N W L + G ++ + V A HWGH E+ +CN DD+ DP+G+ T+EC NMHPL R D GD SPIDP++PGRYY DP C + + G + +Y LP + C HC+++M +YTG+ CKH GY+EF +SWPS+CAPNK DW+ D CG + YP+EF C+D ++ G+ A AP DPV
Sbjct: 8 AALAAGFAQVSFAHIMQKYPMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNV----YSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSS--NSIEGYNIKMRYVLP-DIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCG-TRGQYPEEFWACSDFSMTSDGSTPADAPMP-DPV 318
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 247 bits (631), Expect = 3.900e-67 Identity = 135/360 (37.50%), Postives = 196/360 (54.44%), Query Frame = 2
Query: 179 ATTAMAAIALAALMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYEFLELMPYAFSSNGQQGTRWRGMEKTDPDLLAEYGEG-LWPLKWAYEKGEMAVNGNYKEPAGLEVRKGVCGDPRQDSPVGENEDEIHYGTPNSGWSVLTEYEEGGIITFETVSTADHWGHFEYLICNADDLADPNGIITEECLNMHPLNRVDGGGDDSPIDPSFPGRYYADPPCM----HGDQTG--LFPPG----------------------APRGQIMTQKYQLPAGLTCTHCVVRMTWYTGHKCKHPGYDEFERSSWPSTCAPNKEDWVLTDIENCGDSLAAYPQEFVGCADIAIVPSGTG--SAPAPT 1165
A TA+ IA+ M VP AV+ H + + P+SR Y RSK FND ++E +F+ G + R ++ DPD+LA+YG+G +W + A++KGE N NY E + V GVCGDP P G ++ Y TPN+ W ++ Y+ G II + V +HWGH EY +C+ D+ DP+G++T++CLNM+PL+R + +SPIDP +PGR++ +P C DQ+G + G + +G I T +Y LP + C HCV++M +Y C HPGY EF+ WP CAPNKE+W+ C D + F GC+DI +V G +AP PT
Sbjct: 12 AATAVVVIAMIVAMP-YVPTAVEGHGFCIEPISRQYLRSKEFNDGGEFYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDP----PQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFD-PEWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGKTFPTAPEPT 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3379.9033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3379.9033.1 >prot_H-paniculata_contig3379.9033.1 ID=prot_H-paniculata_contig3379.9033.1|Name=mRNA_H-paniculata_contig3379.9033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=399bp MSTATTAMAAIALAALMAATVPHAVDAHSYMMNPVSRSYHRSKAFNDDDYback to top mRNA from alignment at H-paniculata_contig3379:3893..10304+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3379.9033.1 ID=mRNA_H-paniculata_contig3379.9033.1|Name=mRNA_H-paniculata_contig3379.9033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6412bp|location=Sequence derived from alignment at H-paniculata_contig3379:3893..10304+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3379:3893..10304+ >mRNA_H-paniculata_contig3379.9033.1 ID=mRNA_H-paniculata_contig3379.9033.1|Name=mRNA_H-paniculata_contig3379.9033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2394bp|location=Sequence derived from alignment at H-paniculata_contig3379:3893..10304+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |