prot_H-paniculata_contig3378.9031.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3378.9031.1
Unique Nameprot_H-paniculata_contig3378.9031.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig3378.9031.1 vs. uniprot
Match: D8LN52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN52_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 7.840e-93
Identity = 130/244 (53.28%), Postives = 165/244 (67.62%), Query Frame = 0
Query:    1 MRSVGEMPLHEYHQERRVEPNLRPLEYLIPGPIVLVRYLLLVPVWPMIVVYAEAVSFWPFSSAHKGDHSQAFSDDALWMAPNDWLAVGVPDFDVSDNSSGLDFLYWAIVPHLLWTVISATWIAILGCARLVCWYFGHTEDWSAHPWNVYFASQESPFHVWCAHLQRALGLGFTNFISKELLRVSMGFVVLVTIISLAVQRGTCAEQEWAYVFSHLAWWGIMLIGHLARRRNLFESVRRKPLPTI 244
            MR VGE  LH  H+        R  E+L+PGP+ L R+LL VPVWPM++VY+E  SFWPFS A +GDHS   S+D+LW  P DW  V VP    SDN S L ++YWAIVPHLLWT++SA W+ +LG A LVCWYFGH EDWSAH W VYF+SQESPF VW A LQ ALG+GFT + ++E  R+      L  ++    +RG C EQEWA+VF+  AWW  +LIGH AR++N+F+ +     P +
Sbjct:  204 MRRVGEKTLHLCHESATGNGG-RLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEDSLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQESPFSVWSARLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNMFKPLNEAAGPAV 446          
BLAST of mRNA_H-paniculata_contig3378.9031.1 vs. uniprot
Match: A0A6H5JN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN14_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.200e-48
Identity = 77/139 (55.40%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    1 MRSVGEMPLHEYHQERRVEPNLRPLEYLIPGPIVLVRYLLLVPVWPMIVVYAEAVSFWPFSSAHKGDHSQAFSDDALWMAPNDWLAVGVPDFDVSDNSSGLDFLYWAIVPHLLWTVISATWIAILGCARLVCWYFGHTE 139
            MR VGE  LH  H+        R  E+L+PGP+ L R+LL VPVWPM++VY+E  SFWPFS A +GDHS   S ++LW  P DW  V VP    SDN S + ++YWAIVPHLLWT++SA W+ +LG A LVCWYFGH E
Sbjct:  204 MRRVGEKTLHLCHESATGNGG-RLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSGESLWANPWDWFRVAVPSLSRSDNDSPMSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341          
BLAST of mRNA_H-paniculata_contig3378.9031.1 vs. uniprot
Match: A0A6H5JNH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH5_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 8.760e-30
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0
Query:  139 EDWSAHPWNVYFASQESPFHVWCAHLQRALGLGFTNFISKELLRVSMGFVVLVTIISLAVQRGTCAEQEWAYVFSHLAWWGIMLIGHLARRRNLFESV 236
            EDWSAH W VYF+SQESPF VW   LQ ALG+GFT + ++E  R+      L  ++    +RG C EQEWA+VF+  AWW ++LIGH AR++N+F+ +
Sbjct:   10 EDWSAHSWGVYFSSQESPFSVWSWRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIVVLIGHAARKKNIFKPL 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3378.9031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN52_ECTSI7.840e-9353.28Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JN14_9PHAE1.200e-4855.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH5_9PHAE8.760e-3051.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..227
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 180..198
NoneNo IPR availableTMHMMTMhelixcoord: 208..227
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3378contigH-paniculata_contig3378:15513..16244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3378.9031.1mRNA_H-paniculata_contig3378.9031.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3378 15513..16244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3378.9031.1 ID=prot_H-paniculata_contig3378.9031.1|Name=mRNA_H-paniculata_contig3378.9031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MRSVGEMPLHEYHQERRVEPNLRPLEYLIPGPIVLVRYLLLVPVWPMIVV
YAEAVSFWPFSSAHKGDHSQAFSDDALWMAPNDWLAVGVPDFDVSDNSSG
LDFLYWAIVPHLLWTVISATWIAILGCARLVCWYFGHTEDWSAHPWNVYF
ASQESPFHVWCAHLQRALGLGFTNFISKELLRVSMGFVVLVTIISLAVQR
GTCAEQEWAYVFSHLAWWGIMLIGHLARRRNLFESVRRKPLPTI
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