mRNA_H-paniculata_contig3378.9029.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.120e-49 Identity = 88/167 (52.69%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 1 MFICAVSRPDPSHDFDGKIGIWRVCVIKQVKRNSAR-------------------RKRG----QQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
M I A +RPDP+HDFDGKIGIWR+CVI+ +R+S + R R ++YEFD TIDAE Y++WY + LLP +KE M WL + VV QQDGA+ HTGK P LN G GW + LVTQPAQSPDLNI DLG FASLK RVW +ID
Sbjct: 195 MVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSID 361
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 104 bits (259), Expect = 2.280e-23 Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 1 MFICAVSRP----DPSHDFDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDV-TIDAEGYQEWYKETLLPEVKEN--MTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+CAV+RP D + FDGKIGIW V + +RNS R RG ++ +++A YQ+ E +LP ++E + W + + Q+D A H + + E R+ GWNI + TQP SPD N+ DLGFFAS+++ +++R ID
Sbjct: 272 MFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPHHLRSRAA-VREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNID 420
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.490e-23 Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 1 MFICAVSRP--DPSHD--FDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+CAV+RP D +H +DGK+G+W + KR S R RG +T+ Y+ + + ++P ++ G + QQD A H D P L GR GWNI L+ QPAQSPD N+ DLGFF +++S + TID
Sbjct: 209 MFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTID 355
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A6G0WM27_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM27_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.430e-22 Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 1 MFICAVSRPDPSHD------FDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKS 399
MF+ AV+RP HD FDGK+G+W + + KR S R R +++ +E Y + +LP +K M++++ ++ QQD A H+ K + N++G GWN+ L QPA SPD N+ DLGFF S++S
Sbjct: 218 MFLAAVARP--RHDEATNQFFDGKLGMWPFVIQEPAKRTSKNRARDTLISTPISVTSEVYFDMLVSNVLPAIKRKMSFMKNSKIFIQQDNAGPHS-KSVNHRFNQVGSYDGWNVALKNQPANSPDFNVLDLGFFNSIQS 353
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.180e-20 Identity = 54/144 (37.50%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 1 MFICAVSRPDPSHDFDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+CAV RP + FDGKIGIW RNS R G V +D Y+++ ++P +KE + + VV Q D AT H D L ++ DG W + QP SPDLN+ DLGFFAS++S ++ ++D
Sbjct: 44 MFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPSV-SKRVVLQHDNATPHRSIDDAA-LAQVSTDG-WTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVD 184
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A0N7L738_PLAHL (Predicted methyltransferase n=4 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L738_PLAHL) HSP 1 Score: 97.1 bits (240), Expect = 1.190e-20 Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 1 MFICAVSRPDPSHD----FDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+ AV+RP S +DGKIG+W V + +R+S R G T+D + Y++ ++P +K W G+ VV QQD A H D P +++ GGW++ L QPA SPD N DLGFFASL+S + + TI+
Sbjct: 527 MFLAAVARPRWSAKNHCIWDGKIGVWPFAVYEPAERSSKNRAAGTLELKTYTVDRDIYRQALCRMVIPRIK--AVWPSGKRVVLQQDNAKPHVTVDDP-EVHSACSAGGWDMKLTAQPANSPDFNANDLGFFASLQSLQHKMKAKTIE 671
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A024TAS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS5_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.600e-20 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 1 MFICAVSRPDPSHDFDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTW---LEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKS 399
MF+CAV+RP + +DG++G W + R+S R G + V + + Y+ + ++P +K W ++G +V QQD A H D + DGGW I + QPAQSPD+N+ DLGFF S++S
Sbjct: 31 MFLCAVARP--RNGWDGRLGCWEIVERAAAVRSSHNRPAGTEVVKSVVVTKDVYRRILVDKVVPAIKSKWKWPVGVDGGAIVLQQDNARPHIAPDDAEFVT-ASEDGGWTIRIENQPAQSPDMNVLDLGFFNSIQS 163
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: W2Q5E8_PHYPN (Uncharacterized protein n=2 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q5E8_PHYPN) HSP 1 Score: 92.4 bits (228), Expect = 2.430e-20 Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = 1
Query: 1 MFICAVSRP--DPSHD--FDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+CAV+RP D + +DGKIG+W V + +R S R G ++D E Y++ ++ +KE W G+ VV Q D A H D P + G WN+ + QPA PD N DLGFF SL+S +++R TI+
Sbjct: 1 MFLCAVARPRWDATRHRIWDGKIGLWPFAVYEPAERASKNRPAGTLEIKTYSVDREIYRQALCRMVISRIKE--VWPSGKRVVLQHDNAKPHVAADDPEVVAACSL-GNWNMKICPQPANLPDFNANDLGFFNSLQSLQYKKRAKTIE 145
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 93.6 bits (231), Expect = 2.740e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 1 MFICAVSRP---DPSHD-FDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+ AV+RP H +DGKIG+W V + +R+S R G +D + Y+ ++P VK + W G+ V Q D A H D P + DGGW++++ QPA SPD N+ DLGFFAS++S +++ TI+
Sbjct: 57 MFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVK--VVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIE 201
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Match: A0A080YW97_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080YW97_PHYPR) HSP 1 Score: 90.5 bits (223), Expect = 3.940e-20 Identity = 53/148 (35.81%), Postives = 77/148 (52.03%), Query Frame = 1
Query: 1 MFICAVSRP----DPSHDFDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDAEGYQEWYKETLLPEVKENMTWLEGEEVVTQQDGATLHTGKDTPRKLNELGRDGGWNINLVTQPAQSPDLNITDLGFFASLKSRVWRERYGTID 432
MF+ A++RP + + +DGKIG W V + +R S R G T+D + Y+ +++PE+K W G+ V QQD A H D + D GW++ L QPA SPD N+ DLGFFASL++ R+ TI+
Sbjct: 1 MFLVAIARPRWVSEQNTVWDGKIGTWPFVVYEHTQRKSKNRAAGTLELKTYTVDRDIYRACLVHSVIPEIKR--LWPSGKRVHLQQDNARTHVLLDDVAVMAAC-TDKGWDMTLTAQPANSPDYNVLDLGFFASLQTLQHRKNSRTIE 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3378.9029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3378.9029.1 >prot_H-paniculata_contig3378.9029.1 ID=prot_H-paniculata_contig3378.9029.1|Name=mRNA_H-paniculata_contig3378.9029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp MFICAVSRPDPSHDFDGKIGIWRVCVIKQVKRNSARRKRGQQYEFDVTIDback to top mRNA from alignment at H-paniculata_contig3378:8281..8712- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3378.9029.1 ID=mRNA_H-paniculata_contig3378.9029.1|Name=mRNA_H-paniculata_contig3378.9029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=432bp|location=Sequence derived from alignment at H-paniculata_contig3378:8281..8712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3378:8281..8712- >mRNA_H-paniculata_contig3378.9029.1 ID=mRNA_H-paniculata_contig3378.9029.1|Name=mRNA_H-paniculata_contig3378.9029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig3378:8281..8712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |