prot_H-paniculata_contig3378.9028.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3378.9028.1
Unique Nameprot_H-paniculata_contig3378.9028.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length457
Homology
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 4.320e-80
Identity = 141/210 (67.14%), Postives = 164/210 (78.10%), Query Frame = 0
Query:  171 PPFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSL--TPLA-----LTAF----------RSTQASE-EEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLLAGVGNKPLARTP 362
            PPF G+EL +LC+HLNDRNRRAKRLAQ+CQ+MFLRLFFKDHS+VVQGL+LSLRSNGFIAYVPAFD KGPVY+ D+DG VQ+DPALLGLPA  G PPSKAFA LP+CR +PGA +SL  TP A     ++A+          R  +  E EEVLE+R P      G V RLRVLDGV+LR+SCEVLPTQARLPK+RFLLAGVGN P + +P
Sbjct:   58 PPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLPAGAGNPPSKAFATLPACRALPGAGVSLVSTPPAGKSNAVSAYYKAGGGXXXGRDGEGGEDEEVLEVRPPRGGG--GKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGNHPASHSP 265          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 4.110e-54
Identity = 147/353 (41.64%), Postives = 192/353 (54.39%), Query Frame = 0
Query:   24 PPPAGVDAFPALRNPPQDDNGDAMLDALLGMDMP----FEAETVNLGRSTSVSHPSWRDGGALILAARDDGQHDLRDDSGRGPNEPAD---------SLVDALLEMDIDGKAESKSHTASTARTGANVHAAKIGLND-----AAGSNPGPLESPGKSESTASVGPPPFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSL--TPLALTAF---------------RSTQASE-EEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQ 340
            PPP G+++FP L  P   D+GD +LD+LLG+++      +A     G  +         GG +   +                              SL+D+LL ++I           +TAR G      +   +D       G + G   SP   ++  +  PP F G+EL +LC+HLNDRNRRAKRLAQ+CQ+MFLRL+FKDHS+VVQGL+LSLRSNGFIAYVPAFD KGPVY+ D+DG VQ+DPALLGL A  G PPSKAFA L +CR +PGA +SL  TP A  +                R  +  E EEVLE+R P      G V RLRVLD V+L+   ++   Q
Sbjct:  677 PPPPGMESFPELGGP---DDGDDLLDSLLGLEVSRSTTAKAAPAPAGSDSGFGSSGDVSGGTMKTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLDSLLGLEIGP---------TTARHGGEATPGEQDQDDITAHGGGGGDAGEAFSPSARDNVVTASPP-FGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLYFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLSAGAGNPPSKAFATLQACRALPGAGVSLVSTPRAGKSNAVSANCKAGRGGGPGRDGEGEEDEEVLEVRPPPGGG--GKVLRLRVLDSVSLQGDRKICAEQ 1014          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 6.180e-38
Identity = 85/180 (47.22%), Postives = 116/180 (64.44%), Query Frame = 0
Query:  172 PFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLLA 351
            PF   ELA++C HLN R R AK+L+QQCQ++FLRL F +   VV  +++SL++NGF+AY+PAFDTKGPV+L DK G VQM P LL LPA +GG P++ FA +P+CR +P A L L           Q    + L + +  +++V   V  +     V L V+C+V P +ARLP LRF LA
Sbjct:  565 PFGTLELARVCEHLNSRTRGAKQLSQQCQELFLRLHFMNRVRVVDAVVMSLKANGFLAYIPAFDTKGPVFLADKSGVVQMAPQLLRLPADSGGEPAQGFAMIPNCRALPHARLVL-----------QEGTPQELRVEVEKAAAVTFHVPMV-----VQLYVTCDVQPHKARLPDLRFGLA 728          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A448Z1J3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1J3_9STRA)

HSP 1 Score: 131 bits (329), Expect = 6.470e-29
Identity = 70/185 (37.84%), Postives = 109/185 (58.92%), Query Frame = 0
Query:  173 FEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLLAGVGNKP 357
            +   +++K+C  LN +NR AK  + +CQ +FL L+FKDH E+ Q ++ +LRSNGF AY+P FD + P+YL D+DG VQ+DPALLGL  T+G  P+  FA   S R  P  T +L            + E   LE+ L  ++       ++ +LD VT+++ C+   T++R+P+ R  L    ++P
Sbjct:  983 YTNEKVSKICQTLNRQNRMAKLSSFECQGLFLSLYFKDHVEITQAVVTNLRSNGFWAYIPKFDFRAPIYLSDRDGVVQIDPALLGLKKTSGLDPTTGFATSKSTRRFPSGTCTLH----------DSLEHSHLEVSLRETTKTY----KITILDVVTVKIFCDEWDTKSRVPRPRIHLIADSSEP 1153          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.010e-28
Identity = 73/212 (34.43%), Postives = 121/212 (57.08%), Query Frame = 0
Query:  172 PFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEE--EVLEIRLPSSSSVRGSVR-RLRVLDGVTLRVSCEVLPTQARLPKLRFLLAGVGNKP-LARTPGTTGNNLQDKLFSQSQE 379
            P+  +E+ K+C  +N +NR +K  +  CQ +FL L+F+ +++V   +++ LR+NG + YVP +D KGPV+L DKDG+VQ+ P+++GLP+  G PP+  FA +  C+  P  +  +            A +E  + L++ +P+ SS   SV    R+LD + +++SC+     AR+P  R  L   G KP + RT  T    +  KL  Q Q+
Sbjct:  631 PYSTAEVTKICEGINHQNRISKLCSMSCQRLFLSLYFRGNTDVAPAVVIGLRANGLLVYVPKYDMKGPVFLSDKDGNVQIHPSVMGLPSKAGLPPTSGFAIVDGCKRFPDGSCDIC----------NADDEANKYLQVIVPAGSS---SVHCDFRLLDVIEVQLSCDTSDVVARIPPTRLHLISKGKKPKIGRTNET---KVTTKLVEQRQK 826          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A7S1Z5Q1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z5Q1_TRICV)

HSP 1 Score: 120 bits (302), Expect = 4.340e-27
Identity = 69/178 (38.76%), Postives = 98/178 (55.06%), Query Frame = 0
Query:  173 FEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLL 350
            ++  ++AK+C  LN + R AK  +  CQ +FL L+F+D  EV   +++ +R NG + YVP FD KGPV+LCDKDG VQ+DP++LGLPA         F  L  CR  P     L        +     E+  L + +P SS  R  V   R LD V++++SC+   T AR+P  R  L
Sbjct:   82 YKTGQVAKICVRLNYQTRMAKLSSMDCQRLFLSLYFRDQVEVAPAVVVGVRLNGLLVYVPKFDLKGPVFLCDKDGRVQVDPSILGLPAGVXXXXXXXFTALDGCRMFPDGKCIL--------QDGDKEEDRRLTVMVPGSS--RPCV--FRPLDVVSVQLSCDTSDTVARIPPPRLHL 247          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: F0WJX6_9STRA (DIS3-like exonuclease 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJX6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.700e-24
Identity = 67/199 (33.67%), Postives = 112/199 (56.28%), Query Frame = 0
Query:  159 PGKSESTASVGPPPFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQA-RLPKLRFLLAGVGNK 356
            P ++  +  VG P    ++L ++  HLN +++ AKR +QQC+++FL L+F ++  V  G+I SL+ NGF+ Y+P +D +GPVYLCD+D  VQ++P+L G+P    G P+ AFA+    R IP A + +              + E L +   ++S     +   R    V +++ C  + TQ+ R+  L+FLL G+  K
Sbjct:  949 PEETSPSRDVGTPGVPLTDLIQMTHHLNVKHQSAKRASQQCKELFLALYFSENKIVTVGIITSLKENGFLVYLPEYDLRGPVYLCDRDNRVQINPSLCGVPWHDCGEPTGAFARSEYIRYIPHAKICMD------------GDNERLLLSNVNASLDEKPMCEFREFQHVEVQILCNNMDTQSLRIEPLQFLLTGIPGK 1135          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A7S3DYM8_9STRA (DIS3-like exonuclease 1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DYM8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.090e-23
Identity = 70/181 (38.67%), Postives = 96/181 (53.04%), Query Frame = 0
Query:  172 PFEGSELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTI--PGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLL 350
            PF G +++ +C  LN  NR AK+ +  CQ +FL LFFK++    + ++ +LR NGF+AY+P FD + PVYL D DG VQ+DP LLGL  T G  P+  FA    CR      A LSLT          +  + EVL   +P  +        LR LD V + + C     +AR+P  R  L
Sbjct:  400 PFFGHQVSTICDRLNLHNRLAKKCSFDCQGLFLSLFFKENLVSTEAVVSNLRENGFVAYIPRFDLRVPVYLRDSDGFVQIDPVLLGLEKTAGEDPTVGFAWSRCCRRFGPEDAALSLT----------EGEKLEVLTRTIPKLT--------LRPLDVVQVEIYCSEWDQRARIPSPRVHL 562          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A024GTK0_9STRA (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTK0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.370e-23
Identity = 64/198 (32.32%), Postives = 107/198 (54.04%), Query Frame = 0
Query:  177 ELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQASEEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQA-RLPKLRFLLAGVGNKPLARTPGTTGNNLQDKL 373
            +L ++  HLN R+R AKR +QQC+++FL L+F ++  V  G+I SL+ NGF+ Y+P +D +GPVYLCD+D  VQ++P+L G+P      P+  FAK    R IP A + +              +++ L +    +      + +      V +++ C  +  Q+ R+   +FLL G+  K   +TP    ++ QDK 
Sbjct:  307 DLIQMTHHLNVRHRNAKRASQQCKELFLALYFSENKIVTVGIITSLKENGFLVYLPKYDLRGPVYLCDRDNRVQINPSLCGVPWQDSSEPTGTFAKSEHIRHIPHAKICM------------GEDKKRLSLYTADAHPTETPMCQFTEFQHVEVQILCNKIDAQSVRVEPFQFLLIGIPGK---KTP----HHSQDKF 485          
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Match: A0A024FVR7_9STRA (DIS3-like exonuclease 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVR7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.650e-17
Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = 0
Query:  177 ELAKLCSHLNDRNRRAKRLAQQCQDMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQMDPALLGLPATTGGPPSKAFAK 272
            +L ++  HLN R+R AK  +QQC+++ L L+F ++  V  G+I SL+  GF+ Y+P +D +GPVYLCD+D  VQ++P+L G+P      P+  FAK
Sbjct:  261 DLIQMTHHLNVRHRNAKLASQQCKELVLALYFGENKIVTGGIITSLKEKGFLVYLPKYDLRGPVYLCDRDNRVQINPSLCGVPWQDSSEPTGTFAK 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3378.9028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LN42_ECTSI4.320e-8067.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW4_9PHAE4.110e-5441.64DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJZ0_9STRA6.180e-3847.22DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A448Z1J3_9STRA6.470e-2937.84DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4R116_9STRA6.010e-2834.43DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwell... [more]
A0A7S1Z5Q1_TRICV4.340e-2738.76Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
F0WJX6_9STRA4.700e-2433.67DIS3-like exonuclease 1 n=1 Tax=Albugo laibachii N... [more]
A0A7S3DYM8_9STRA6.090e-2338.67DIS3-like exonuclease 1 n=1 Tax=Amphiprora paludos... [more]
A0A024GTK0_9STRA7.370e-2332.32DIS3-like exonuclease 1 (Fragment) n=1 Tax=Albugo ... [more]
A0A024FVR7_9STRA2.650e-1743.75DIS3-like exonuclease 1 n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 167..281
IPR031192DIS3-like exonuclease 1PANTHERPTHR23355:SF30DIS3-LIKE EXONUCLEASE 1coord: 167..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3378contigH-paniculata_contig3378:1230..11280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3378.9028.1mRNA_H-paniculata_contig3378.9028.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3378 1230..11282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3378.9028.1 ID=prot_H-paniculata_contig3378.9028.1|Name=mRNA_H-paniculata_contig3378.9028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=457bp
VSVPAPSSQHNTPSHRTSVAPLPPPPAGVDAFPALRNPPQDDNGDAMLDA
LLGMDMPFEAETVNLGRSTSVSHPSWRDGGALILAARDDGQHDLRDDSGR
GPNEPADSLVDALLEMDIDGKAESKSHTASTARTGANVHAAKIGLNDAAG
SNPGPLESPGKSESTASVGPPPFEGSELAKLCSHLNDRNRRAKRLAQQCQ
DMFLRLFFKDHSEVVQGLILSLRSNGFIAYVPAFDTKGPVYLCDKDGHVQ
MDPALLGLPATTGGPPSKAFAKLPSCRTIPGATLSLTPLALTAFRSTQAS
EEEVLEIRLPSSSSVRGSVRRLRVLDGVTLRVSCEVLPTQARLPKLRFLL
AGVGNKPLARTPGTTGNNLQDKLFSQSQEFNKAGVTEGASESCPNATISG
SSGVGLSGTDEGRHMGLYRMLQGARDTALESSIEVPPVRLALGKQQGNTS
LDKTDGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031192DIS3L