prot_H-paniculata_contig1140.902.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1140.902.1
Unique Nameprot_H-paniculata_contig1140.902.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
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BLAST of mRNA_H-paniculata_contig1140.902.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 6.050e-63
Identity = 196/455 (43.08%), Postives = 231/455 (50.77%), Query Frame = 0 
Query:   47 QALQEACTMMERVSSALAEAVDDSGVNS-PGHRGESILDDPRWASTAQPSNRGRIAVKRDRTVVDRRRR-------RALSADS----LGEAGMTGFKLGNGVDWGASQED--GLLSRGKVRVSAEHLRFSATRLLAVRREECSAADKHLARLREDLRNSEAREAETAARLEESRELSREQTGFVEGVWQERRRLEAELGARREEVERLRASEDGARTAATVLEGRVEDLSSALRKGVSRAKRDASWGAEAEVAAAGEEARVAMEAIRHQLDDLRREVDKTKRDQTRSDQPARNGQSERTXXXXXXXXXXXTRAQRSTGGAHSAVQGATGDPGEGMVGPLQDRLRNGGDETEGQAQIVADARMTSVVLEGEFQRLRAKYEKAKGRIAALEEQVAATRRAGAHARREFQGALEALKLSQELLLRIQRDRELDAGCSPDGQLPSCGNSPRTTPAIVPA 487
            +AL+E+C +MER++SAL+ A  D   +  PG  G S LDDPRWA   +                            RA S DS    +G+A +     G+  + G    D   ++SR +VR  AE LRF A RLL VR+EE  AA   +A LR DLR+SE+REAE  ARLEESRELSREQTGFVEGVW+ER RL           ERLRASED ARTAATVL+G+V DLS+ALR+  +RAKR+A    EA VAA   EAR AMEA+R QLDDLR+E                                                                                            GEFQRLRAKYEKAKGRI ALEE VAA+RR  A ARREF+GALEALKLSQELLLRI R R+ +A   P         +P T PA  PA
Sbjct: 1129 EALRESCGVMERIASALSAAAADRRTSRRPGSDGGSELDDPRWAFGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFSVDSNRSGVGDADLRQDGFGDCAESGGEGHDLRRVVSRAEVREVAERLRFEAARLLGVRKEERKAAGDTVASLRRDLRDSESREAEVTARLEESRELSREQTGFVEGVWKERHRLXXXXXXXXXXXERLRASEDAARTAATVLDGKVADLSAALRQEQARAKREA----EAAVAA---EARDAMEALRQQLDDLRKE--------------------------------------------------------------------------------------------GEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFKGALEALKLSQELLLRIHRQRQNNAVADPTDTA-----TPTTHPAAAPA 1479
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1140.902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI6.050e-6343.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..437
NoneNo IPR availableCOILSCoilCoilcoord: 223..243
NoneNo IPR availableCOILSCoilCoilcoord: 288..315
NoneNo IPR availableCOILSCoilCoilcoord: 174..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1140contigH-paniculata_contig1140:15702..17855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1140.902.1mRNA_H-paniculata_contig1140.902.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1140 15702..17855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1140.902.1 ID=prot_H-paniculata_contig1140.902.1|Name=mRNA_H-paniculata_contig1140.902.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
AIEGSALSGPVGVTRRAGRIEQRSVCSTPLDIDKECGAEARSPWESQALQ
EACTMMERVSSALAEAVDDSGVNSPGHRGESILDDPRWASTAQPSNRGRI
AVKRDRTVVDRRRRRALSADSLGEAGMTGFKLGNGVDWGASQEDGLLSRG
KVRVSAEHLRFSATRLLAVRREECSAADKHLARLREDLRNSEAREAETAA
RLEESRELSREQTGFVEGVWQERRRLEAELGARREEVERLRASEDGARTA
ATVLEGRVEDLSSALRKGVSRAKRDASWGAEAEVAAAGEEARVAMEAIRH
QLDDLRREVDKTKRDQTRSDQPARNGQSERTDRSSQNDQSRRTRAQRSTG
GAHSAVQGATGDPGEGMVGPLQDRLRNGGDETEGQAQIVADARMTSVVLE
GEFQRLRAKYEKAKGRIAALEEQVAATRRAGAHARREFQGALEALKLSQE
LLLRIQRDRELDAGCSPDGQLPSCGNSPRTTPAIVPANAFPAAVAAAE
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