prot_H-paniculata_contig3376.9021.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3376.9021.1
Unique Nameprot_H-paniculata_contig3376.9021.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length209
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3376.9021.1 vs. uniprot
Match: D8LBA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA1_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 8.580e-12
Identity = 48/74 (64.86%), Postives = 53/74 (71.62%), Query Frame = 0 
Query:   16 RLQWERNNRMLMEELEXXXXXXXXXXXXXXXXXERRTKAAMYLGRAAAAVEEGNFRQLLRGAEREAERRQRVAR 89
            R+Q ERN+  LMEELE               XX RRTKAA+YLGRAAAAVEE NF+Q+L GAEREAERRQRVAR
Sbjct:  590 RIQRERNSIALMEELERKRLAREAEMAVLAEXXXRRTKAALYLGRAAAAVEEKNFQQMLGGAEREAERRQRVAR 663
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3376.9021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBA1_ECTSI8.580e-1264.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..123
NoneNo IPR availableCOILSCoilCoilcoord: 2..47
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
NoneNo IPR availableCOILSCoilCoilcoord: 136..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3376contigH-paniculata_contig3376:10599..14748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3376.9021.1mRNA_H-paniculata_contig3376.9021.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3376 10116..14805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3376.9021.1 ID=prot_H-paniculata_contig3376.9021.1|Name=mRNA_H-paniculata_contig3376.9021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MKQHKQKEAMKAEADRLQWERNNRMLMEELENKKLAREAEHLQLADEEER
RTKAAMYLGRAAAAVEEGNFRQLLRGAEREAERRQRVARDAAERYQNVTN
EDRRQIEENTRKKESRKKRLYDQKQTEFALARTRLLEEQREEMHQRQESF
KRAREKAKEVRRKIVNHNPYANTVNHESVERGRRHIVVKAAAAAATTATT
AVTNALCS*
back to top