mRNA_H-paniculata_contig3375.9019.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3375.9019.1
Unique NamemRNA_H-paniculata_contig3375.9019.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: D7FQJ9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQJ9_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.460e-96
Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 1 
Query:    1 MKTAFAASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            MKTAFAA  LAM  +T AFV P AV+ AL  S     +R +SS+    SMEFAGGL GA GPEPNSKNFDP GF+ A+PEN+LF+REAEIKHGR+AML ICGLI PEFVRVPG+IYQDVSVLDAHN MVEKGPMWQLLFWIS+AEI+L PTVI+M +KDREPGDF LDPLN+CK PEK E+Y+LAELK+GRLAMMA SGA+TQMA+ GHG+PF
Sbjct:    1 MKTAFAA--LAMCGTTSAFVTPNAVK-ALAPS-----TRASSSL----SMEFAGGLRGADGPEPNSKNFDPFGFSEARPENLLFFREAEIKHGRIAMLAICGLIAPEFVRVPGEIYQDVSVLDAHNVMVEKGPMWQLLFWISLAEIILFPTVIDMDKKDREPGDFALDPLNLCKTPEKTEKYKLAELKHGRLAMMAVSGALTQMAMFGHGYPF 201
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A835ZCB2_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB2_9STRA)

HSP 1 Score: 258 bits (659), Expect = 3.780e-80
Identity = 122/176 (69.32%), Postives = 145/176 (82.39%), Query Frame = 1 
Query:  112 SRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            +R A    +A SMEFAGGL+GA GPEP +KNFDPLG A   P+ VLFYREAE+KHGR+AML + G++VP FVR+PGDIYQ VSV++AHNAMVEKGPM QLLFW+S+ EI+ +P   NM  KDREPGDF LDPL  CK+PEKK+RYQL+ELKNGRLAM+AFSG +TQ  LTGHGFP+
Sbjct:   30 ARTAVRSSSALSMEFAGGLLGADGPEPTTKNFDPLGLAEKNPDAVLFYREAELKHGRIAMLAVLGMVVPNFVRLPGDIYQGVSVVEAHNAMVEKGPMVQLLFWLSLFEIITAPLTWNMQAKDREPGDFSLDPLGFCKDPEKKKRYQLSELKNGRLAMLAFSGMITQAVLTGHGFPY 205
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A835Z019_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z019_9STRA)

HSP 1 Score: 253 bits (645), Expect = 4.230e-78
Identity = 130/210 (61.90%), Postives = 162/210 (77.14%), Query Frame = 1 
Query:   10 AFAASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            A AA +LA+ A   AFV P++  G+       + +RV +S K+A SMEFAGGLIGA GPEP +KNFDPLG A  +  +VLFYREAE+KH R+AML + G++VP FVR+PGDI+Q V+V+DAHN MVEKGPM  +LFW+S+ E+L +P   NM EKDREPGDF LDPL  CK+PEKK+RYQL+ELKNGRLAM+AFSG +TQ  LTGH FP+
Sbjct:    3 AVAACSLALAAGASAFVAPSSFAGS-------QLARV-TSAKSALSMEFAGGLIGADGPEPTTKNFDPLGLA--EKGDVLFYREAELKHCRLAMLAVVGMVVPNFVRLPGDIFQGVNVVDAHNLMVEKGPMVMVLFWVSLFELLTAPLTWNMAEKDREPGDFMLDPLGFCKDPEKKKRYQLSELKNGRLAMLAFSGMITQAVLTGHDFPY 202
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A7R9U7U0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7U0_9STRA)

HSP 1 Score: 232 bits (591), Expect = 3.820e-70
Identity = 115/190 (60.53%), Postives = 143/190 (75.26%), Query Frame = 1 
Query:   70 AVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            A+   +  +++ +  RVA S  +A  M+FAGGLIG  GPEP SKNFDPLG A   PE + ++REAEIKHGR+ ML   G+IVPEF R+PGDI+Q V+V+DAHN MV KGPM+ LLFWIS+ EI+  PT+  + E  REPGDF  DPL++ KNP+K +RY LAELKNGRLAM+AFSG +TQ ALT HGFPF
Sbjct:    7 ALAALVASASAFQAGRVARSRTSALRMDFAGGLIGGDGPEPFSKNFDPLGLAEKSPELIPYFREAEIKHGRICMLATLGMIVPEFARLPGDIFQKVNVVDAHNEMVSKGPMYMLLFWISLWEIISLPTIKQLDE-GREPGDFAFDPLSLGKNPDKMKRYALAELKNGRLAMLAFSGMITQAALTNHGFPF 195
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A7S1XSJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSJ2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 6.650e-62
Identity = 114/208 (54.81%), Postives = 141/208 (67.79%), Query Frame = 1 
Query:   16 AASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            AA ALA+VAS  AF  P   RG L + N+                EFAGGL+G  GPEPNS+ FDPLG A   P  + ++REAEIKHGR+ ML   G+IVPEF+R+PGDI+Q V  + AH+AMV KGPM+ LL WI V E++  PT+  + E  R PGDF  DPL++ KNPEK +RY LAELKNGRLAM+ FSG +TQ ALT +GFP+
Sbjct:   76 AAMALALVASAAAFQAPQRARG-LKQLNA----------------EFAGGLLGGDGPEPNSRQFDPLGLADKNPNMIKYFREAEIKHGRICMLATLGMIVPEFMRLPGDIFQGVDAIGAHDAMVAKGPMYMLLIWIGVWELVSFPTIAALDE-GRMPGDFAFDPLSLGKNPEKLKRYSLAELKNGRLAMLGFSGMITQAALTHNGFPY 265
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A7S1U797_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U797_9STRA)

HSP 1 Score: 195 bits (496), Expect = 3.290e-56
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 1 
Query:  172 GAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            G  GPEPNS+ FDPLG A   P  + ++REAEIKHGR+ ML   G+IVPEF+R+PGDI+Q V  + AH+AMV KGPM+ LL WI V E++  PT+  + E  R PGDF  DPL++ KNPEK +RY LAELKNGRLAM+ FSG +TQ ALT +GFP+
Sbjct:   31 GGDGPEPNSRQFDPLGLADKNPNMIKYFREAEIKHGRICMLATLGMIVPEFMRLPGDIFQGVDAIGAHDAMVAKGPMYMLLIWIGVWELVSFPTIAALDE-GRMPGDFAFDPLSLGKNPEKLKRYSLAELKNGRLAMLGFSGMITQAALTHNGFPY 185
[Close]
BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A0G4H306_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H306_VITBC)

HSP 1 Score: 184 bits (466), Expect = 1.640e-51
Identity = 102/207 (49.28%), Postives = 137/207 (66.18%), Query Frame = 1 
Query:   19 ASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            A AL +++S+ AFVP      A  RS   +  R  S ++A  +++    ++G  GPEP S+NFDPLG A   P+ + F+REAEIKHGR+AML + G++VP F  +PG   + +SVL AH+  VE G M QLLFW+S+ EI+   TV++M EKDREPGDF +DP    + PE+    +  ELKNGRLAM+AFSG +TQ ALTG  FPF
Sbjct:   11 AVALCLLSSSLAFVPSAP---AALRSRQQQPKR--SVMRAQATLDD---MVGGDGPEPFSRNFDPLGLAEQFPQYLTFFREAEIKHGRIAMLAVLGMVVPSFWTLPGR--EGISVLAAHDKFVENGVMGQLLFWVSLWEIVTFKTVVDMDEKDREPGDFSMDPFGWTRTPERARVLRTQELKNGRLAMLAFSGMITQAALTGKNFPF 207
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BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A6U3XI59_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3XI59_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.100e-47
Identity = 101/220 (45.91%), Postives = 134/220 (60.91%), Query Frame = 1 
Query:    1 MKTAFAASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSMEFAGGLIGAAGPEP---NSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVSV---LDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVCK-NPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            MKTAFA   LA+ AS  AF P                     + K+    EFA GL+G  GPEP    SKNFDP GF+   PE + ++REAE+KHGR AML   G++VPEFVR+PG  +   +V   LDAH+A+++   M Q+L +IS AE +    + NM E DR+PGD+G DP+ +   +PEK++  QL ELKNGRLAM+A  G V   ++TGHGFP+
Sbjct:    1 MKTAFAT--LALAASASAFAPAPV------------------NTKSTQLSEFANGLVGGEGPEPMFSGSKNFDPAGFSERAPEWMNWFREAELKHGRQAMLATVGIVVPEFVRIPGPQFSFEAVPNVLDAHDALIDSS-MKQILLFISFAEAMSMAALSNMNEYDRQPGDWGFDPIGLYPTDPEKRKAIQLKELKNGRLAMVAIGGMVAGASITGHGFPY 199
[Close]
BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A1Z5JGJ4_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGJ4_FISSO)

HSP 1 Score: 167 bits (424), Expect = 1.900e-45
Identity = 92/173 (53.18%), Postives = 112/173 (64.74%), Query Frame = 1 
Query:  151 EFAGGLIGAAGPEP------NSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQDVS---VLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVC-KNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            EFA G +G  GPEP       SKNFDPLGFA   PE + +YREAE+KHGR AML + G +VPEFVRVPG+ +   S   V+ AH+A+ E   M Q+  WIS  E      + NM E DR PGDFG DPLN+  K   K++  QL ELKNGRLAM+A  G V Q A+TG+GFP+
Sbjct:   31 EFAKGYVGGEGPEPMFIGDTGSKNFDPLGFATKTPEWLPWYREAELKHGRAAMLAVAGFVVPEFVRVPGEQFSFESIPKVIQAHDALPES--MIQIFGWISFLEASSFAALANMNEFDRVPGDFGFDPLNLYPKEAAKRKEMQLKELKNGRLAMVAIGGMVAQSAITGNGFPY 201
[Close]
BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Match: A0A7S1UUQ5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUQ5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.370e-44
Identity = 88/172 (51.16%), Postives = 117/172 (68.02%), Query Frame = 1 
Query:  154 FAGGLIGAAGPEP------NSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGICGLIVPEFVRVPGDIYQ-DV--SVLDAHNAMVEKGPMWQLLFWISVAEILLSPTVINMGEKDREPGDFGLDPLNVC-KNPEKKERYQLAELKNGRLAMMAFSGAVTQMALTGHGFPF 639
            FAGG++G  GPEP      +S NFDP+GFA   PE + +YREAE+KH R AML   G++VPEFVR+PG+ +  D   +VL AH+A+ +   M Q+  WIS  E    P + NM   DR PGDFG DPL++  ++PEK++  QL+ELKNGRLAM+A  G V+  A+TGHGFP+
Sbjct:   31 FAGGMVGGEGPEPMPFAKGSSVNFDPVGFAERSPEWLPWYREAELKHCRAAMLATVGMVVPEFVRIPGEQFSFDAIPNVLQAHDALPDS--MIQIFGWISFLEACTFPALANMNSYDRAPGDFGFDPLSLFPEDPEKQKEMQLSELKNGRLAMIAIGGMVSGAAVTGHGFPY 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3375.9019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQJ9_ECTSI1.460e-9673.71Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835ZCB2_9STRA3.780e-8069.32Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A835Z019_9STRA4.230e-7861.90Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7R9U7U0_9STRA3.820e-7060.53Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XSJ2_9STRA6.650e-6254.81Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U797_9STRA3.290e-5659.62Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4H306_VITBC1.640e-5149.28Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A6U3XI59_9STRA3.100e-4745.91Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JGJ4_FISSO1.900e-4553.18Light-harvesting complex I chlorophyll a/b binding... [more]
A0A7S1UUQ5_9STRA1.370e-4451.16Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3375contigH-paniculata_contig3375:11276..17657 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.4
Seed ortholog evalue1.7e-79
Seed eggNOG ortholog2880.D7FQJ9
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S5AH@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-01_008960.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1573
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3375.9019.1prot_H-paniculata_contig3375.9019.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3375 11276..16732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930040.851914-CDS-H-paniculata_contig3375:11275..115481622930040.851914-CDS-H-paniculata_contig3375:11275..11548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 11276..11548 +
1691481122.227969-CDS-H-paniculata_contig3375:11275..115481691481122.227969-CDS-H-paniculata_contig3375:11275..11548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 11276..11548 +
1622930040.875356-CDS-H-paniculata_contig3375:13310..134211622930040.875356-CDS-H-paniculata_contig3375:13310..13421Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 13311..13421 +
1691481122.2388873-CDS-H-paniculata_contig3375:13310..134211691481122.2388873-CDS-H-paniculata_contig3375:13310..13421Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 13311..13421 +
1622930040.8916588-CDS-H-paniculata_contig3375:13646..137841622930040.8916588-CDS-H-paniculata_contig3375:13646..13784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 13647..13784 +
1691481122.2481065-CDS-H-paniculata_contig3375:13646..137841691481122.2481065-CDS-H-paniculata_contig3375:13646..13784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 13647..13784 +
1622930040.905941-CDS-H-paniculata_contig3375:16606..167321622930040.905941-CDS-H-paniculata_contig3375:16606..16732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 16607..16732 +
1691481122.2608197-CDS-H-paniculata_contig3375:16606..167321691481122.2608197-CDS-H-paniculata_contig3375:16606..16732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3375 16607..16732 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930040.9204276-UTR-H-paniculata_contig3375:16732..176571622930040.9204276-UTR-H-paniculata_contig3375:16732..17657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3375 16733..17657 +
1691481122.2737017-UTR-H-paniculata_contig3375:16732..176571691481122.2737017-UTR-H-paniculata_contig3375:16732..17657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3375 16733..17657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3375.9019.1

>prot_H-paniculata_contig3375.9019.1 ID=prot_H-paniculata_contig3375.9019.1|Name=mRNA_H-paniculata_contig3375.9019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MKTAFAASALAMVASTEAFVPPTAVRGALCRSNSLETSRVASSVKAAPSM
EFAGGLIGAAGPEPNSKNFDPLGFAAAKPENVLFYREAEIKHGRMAMLGI
CGLIVPEFVRVPGDIYQDVSVLDAHNAMVEKGPMWQLLFWISVAEILLSP
TVINMGEKDREPGDFGLDPLNVCKNPEKKERYQLAELKNGRLAMMAFSGA
VTQMALTGHGFPFTG*
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mRNA from alignment at H-paniculata_contig3375:11276..17657+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3375.9019.1 ID=mRNA_H-paniculata_contig3375.9019.1|Name=mRNA_H-paniculata_contig3375.9019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6382bp|location=Sequence derived from alignment at H-paniculata_contig3375:11276..17657+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGACCGCGTTCGCTGCTTCCGCCCTTGCCATGGTGGCCTCCACGGA
GGCTTTCGTACCACCAACAGCCGTGCGTGGGGCGCTTTGTCGTTCGAACT
CCCTTGAGACCTCCAGGGTAGCTTCCTCCGTGAAGGCGGCGCCCTCAATG
GAGTTTGCTGGCGGCCTCATCGGCGCAGCAGGACCGGAGCCCAACTCGAA
GAACTTTGACCCCCTTGGCTTTGCGGCGGCAAAGCCAGAGAACGTGCTTT
TCTACCGTGAGGCAGAGATCAAGGTGTGTACTGCTGGAAACATGCGTTTG
TCTTCTACATCAAACATGGATAATACCCAGTGTTGACTTTGAGCGACGTG
GTGGCTTTTGTTTCGGGTGTTATCCAACCGCCTCGCCACGCGATCTAATA
CCACAGCATTCCTGAAGAGTATATGACATGGCGTACTTGTTTTAAGCTGA
AATCGATCTGGGGAAGGAACACTGGTGAGTAGGGGGGTCCGTTGCTGACT
TCGGACAGTAAACCTTACGCGAACATTTTTTTTGTCGCATGTACTGATAC
ATTTGGATATTTAAGTAGGTTACGGCACACGAACGAAGGTGTCTCGACTG
TGCATGAGGGAACAATACGAAGGTGACCCGGAAAAGATGAGATGGCGGTG
TGTCTTCACCACACCTTTAAAATGATGGTGGTCTTGTGCTAGGTAGAGAT
GCACGGGGGCCTCCCATCTTCTGTTTTCTGCAAGGATTTTGTAGTTGGAC
ATACCGGTCTGTGGGGACAAGATACCGATCTACTCCTCAAAGTTTGAATG
CAATTTACTTGAGGAATGACAACTTCGCCTTGAATATCTCCGCTGATTTT
TATTGTTGATGCTCAATGCCCTACACATGCTTCGTGGTATCCATCTCATA
TCCCGATGTTCATTGTTTTTATTGCATACTAACATTCAGAGGTTGATTTA
TTTTTTTTCTCGATTTTTCAATATCTTGTTGAATCACTGCACACTACATA
ATTTTCTCAAGGTTCTTGCAATGATGGTAGCGAATGCGCAAGGGCAAGGT
AGGGACCATTTCTAAAGTTTGGCGCTAAATTGAAACGTGAGCTTGAAGTG
CTTCCGCACAGTAATACACCAAAAGGTATAAACGCGTTCTGAAACCTTTG
GAAGGCTCGAGTGTGTGACGTGGACTTGTTTCATTGGCCATGAAATTACG
TCATATATATAGACACGCAGTATGCCCCGCTAATTTACCCGAACTGAAAA
GCTGCCAACACCTGCAGGCCACGTTCGCCTTTGAAAGGAATTACGACGAT
CGTGTGATCTCTTGTTCAAGCTTGACTTAGTCGAGAAGCAACACTGTCCA
CCTCCTGTCTAAACTGGTTTGAGGCAATGTGCTGATATTATTAAACTTCC
TAAGCACATCCTCAAACGCTCAAACCCATGGCTACGGTGGGTGAAGGTTT
ATTAGCTTTTCCACATGAATCTCGAGCAAGCTAATTTAAACAGCCTGTCA
TCCATCCATGTACTGGCAAGAGGTAGTCCGGTTACCGTAAAGACTGACCC
AAAGATTTCTTATGCTCCTACCCTTGAAATATGTACGAGGCTGCAATGTA
CAACACAAAGTGAATAGCAGGTAACATGTTTTTTTCAATTGAATTTACAA
CATTTTTCTCTTGTCAACCCTCATTTGTACCGCATCCCACCTTTGTTCTG
ACCCTCTGTTAAGGTAAGAGGCACTTGCTTTGATTCAACCCTTTGATCGT
CGAAGACTTTTTTGTGATTAAAAAATTACGTAACGGTTGATGTCGAGGGC
TGTAGTCATGTGCAGAATCATGTACATCCTGCCTTTCGTGTCTATACCGG
ACTGACTTACGAACAGCCGCGGTCCCTCCAATCCCGTGGGGAGGGCGCAA
GTGAGGGGTTTTGCGGAGACCGGCTGTCAAAGGGTAACCTTTATCAATCA
TTTGGGTCAATAAACAATCCCCTTGTGCTTCCTTTCGCATACCACGCGTC
TTTCCTTGTTCGCTTGCCCTCTCACAAAAAATCAGCACGGGCGCATGGCG
ATGTTGGGCATTTGCGGGCTGATCGTGCCAGAGTTTGTCCGCGTGCCTGG
GGATATTTACCAGGATGTTTCCGTCTTGGACGCACACAACGCCATGGTGA
GGAGCCCAGTCGGCCTGTCCGAACGTCTGAATACTATGAACTGTACCACG
TATGTCCCCGTTGCCCAAGTATGTATCTATTGCTACCCCCCATGATTACT
CGATTATCGAGTAAAGGTCGTTGTCGTTGAGTTTTCACCAAGATTGATGT
ACTTGAGATGGCGTGGTAAAAGCACCGTGTTCGTGGTTATTTTCCGCATC
CGGTATTCGAATTTTATGCAGGTGGAGAAGGGCCCCATGTGGCAGCTTCT
GTTCTGGATCTCGGTCGCGGAAATCCTTCTTTCCCCCACCGTCATCAACA
TGGGCGAAAAGGACCGCGAGCCGGGAGACTTTGGCCTCGACCCCCTTAAC
GTCTGCAAGGTATGGCCCCATTCTTATTAAGGCTGTCTGTTGCATGTAGG
GATGCATGTACTGCTCTTGCGTGGTGTAAATTAACCTTGCCAAGCCCCGT
CGTCAAAAAAATATCGATTCATGAATTGATACAGTTAGTGATCTTGTTTT
GTATAATAGAATACGCCATTGCTTGCCACCAGCGCGAAAGGAGGGCTGGC
TGAATAATTGAAAAGGAACTGTTCAGATAACAAGCACAGGCGATGGGCGA
GTTGGATGGTGAGTTGGTGTGTGGAATTTTTCGTAATCAGATTAGGCTGC
AAGAGTGGTTTCATGGGATGAATCAGTGTATCATGCGCAATACAAGAGAC
TGTTGGAAGGGAACGGGGTTTAGATTTTGGCTCGGACTGAAATTCATTGC
ATTCGGTGCCAGAGGATGTTTGACCTAATCGTGTTTTCGGGGCTGAAAGC
TCAATTATTTTTTCGAGCTTGCTTCGTTGTCAACTCACTCTGGTTTCTGA
AGCGGAACATCACGTAAGCACACACGTAACACAGGGCTCAGGCAGACTGA
TGACAACGTCTGTTGAAGCCGACACATAGCAGTCAGCCTAGGGCAACAGG
TAATTGGATGTATTGTAAGTGTTGCCGGTAACAGCGCGCAGACCATGGGT
ACAACGGCAACCATGGGGCAGAACAGACATCCATGCAAACAGGACAGGCG
CCAATGACAGCTGCAAGACTCGGCGAAGTGGAGGTGTCCAAGAATGTGGT
CACGATTGCAGGATTTACAATTTGGTCCAAAGAATGAAATCATGCCTCAA
AGTGCTGAAAAGTGCGCGATACTGGGAAGAGAACGTTGGACTGTACGTGA
ATTTCCGTACTGACTTGTAACTGTTTGTACAGTGCAACAGTTGGATTGGC
TAAATGCAGTGGTGCACAATTCGACCGGGAAAGGTTATTTTATAACAAGT
TATAATTGCCACTCGTCTTGTGAGCCGCAGAAATTGGGGCTCTTATAATG
CTTGCTATGCCCTGCTACACATCTGCTAAAATGTGGTTGAGTTAGTCAGC
CGTATGTGTCAATGAGCGGCGGTGGTGTTGATCTACATTGTTCGTCTACT
AAAAGTGGATGAGCAGCTGTCAACGTGTCTGGTAAAACCCTCTCGTGACT
GGCGACTAAATCAACACAGTTCATCGGGATGAGCAGTTTGCCCACCCGAT
CATTTAAAACTGTTTGAATTCCCTATCGAGTTCGAGGTGTCGGAATTTTC
CATGTTCAACTTTCCATCCTCCATTCAACCATTGCGGCGGTGTACGTCAC
AACTTTTCACCCCGCGGGCCATCCACTACTGCTAATAAACGTGAAATCGA
ACGGACAGGGGAGAGTACTTGATTCTAGCTGTCAAAGGGGTACAATGTTT
TTTCCTGTTCACGTTTTCGACACGTCATCTCTGGTACAGTTACGTTGATT
CTGAGCATATGGACGGTTCGCTTTGGAAACAAAAATTGAGTCAGAGCACC
TCCCTCCAAACACACGTTATCTGACACTTTCGGCGGAACGGAGCAAGGGC
AGGCGTTTTTAGAGCCGAAAAAACTGTCTTCTACCATTGTGTATCCACGA
AAGTTAAGCTAGATTACCCTTGTTAGGCACCCTGCCGCGAATAACCATTG
TAAAGTTGTGCTCGAACAGGGTGGAAAACAAACACCTGGAGATTGTTTGG
AACAAACGCGCACGATATAATGCGAATAGACTACTATACAGATATTGTAC
ACATTTCCTTGACAATCAATGCTGTCGGGTAGAGTCAAGTAGGCAAATTT
TTCAGTTTTACTACAACAGATCATATCATGTCTGATCAAATGTACTAGAC
TCATCCGCCATGAGAAAACGTGCAAGAACAGAAAATCTACACAAGAATCT
TTTGCGGAACCGATTTGGCATCCACAGAAATTGTAGGCTTGACAAATTGA
CGTTTTGCTGAAATTTCACTTTTCATTGTTGGAGACATGTGTCACAACTA
GGGCAACATCCTTGACCATACCACGCATTGTAATTGCCCCCGTCTCCAAC
AATCAACACTACTCGTCTGTTGCGCCAAGAAAAGATCAGATCGTGAAGAC
ATGCCACCCCCCCCCCCCCCCACCACGATTGATACATGTACACGAAACAC
ACAAAAGCCCAAAATGAAGTGAAAAAACAGGTTTTGCTCCGTTAATATTC
TGTATACCGCGTTTGATTCGTATATGTGTCTGCATTAATAATCTGTACGC
AACGAATCGTCGTAGCATGTTAACCCATGAGCCATCCCTACATCGTATTT
GATTCCGCACTGCCCCCAAACTGCGACACGAATTGAGAAAGGATCCTATT
GCACCAAAACAACTTGAATCATGTATGAGATATGCTACATTTGTGGTAGT
TGGGTGATCGAACGTGCGTGATGGATTTTATCTTGTTTTTCGTGCGCACT
CAGTTACTGCCTACCAACATGATGAGGGTGTCAGCCATCCGACCCTTCCC
TCTCCTGGAGAGAGACCCCCCCCCCCCCCCCCCCCCCCCCTATTTGCGGC
GGCTTCACTGCGGGATTCCCAGTTCTTGGCAGCACTTCATGTCATACGTT
GCTTTGGTATTATACAAATAGTAATATCCACCGTGTAAAGTCAAGTGTAG
GGGCATTTTGATATCAGCACAGTACCGAGTAACGATGCTATTCTGGCGAT
ATATCATAAAAGTACGGAGCATATCATGGAACGAATCGATTGTGCCGGAC
GCAGTACCGTCACTTGCTGACATTATCCACCATCCCGCATTTCATCGCTC
GTTGCGTTTTTCTTCGTCGTTTCGCTAAAAGAACCCCGAGAAGAAGGAAC
GGTACCAACTTGCGGAGCTGAAGAACGGCCGTTTGGCGATGATGGCATTC
AGCGGTGCCGTTACGCAAATGGCCCTGACCGGCCACGGTTTCCCTTTCAC
GGGATAAAACAACTTTGTGGACATAGCTGCCGTTTTTGTCCCAGTATAAC
CGTCAGCTGCCAGAGGAGATCACTGGGTAGATGGAGGCCCGGAGTGACCG
GCTGTGCCACGTCCGACGCCCCCCCCCCCCCCTCCTTCCCCATGCTAGTA
GTCCTGGTGTTGTCCTGGGTCGGATCAGATTTACGTAGCACAACGTCTGT
TGGAGTAGCCCTACGTTCTCAGATTATAGTCTTGGTTTCTCCACTATGTT
GCTTTCCCTTCATGGGTTAATTTTGGTTACTCGCGGAACCGCTTTCTATA
ATGTTTGTTTCCTTTCAGAAAAGGACGGGGTGGCGGTAGAAATGAGTTTA
TTTACGGCTGGTGAGCGTTTAAGTACGTGACGTTATCGCTAGCCCAAGGC
GGGACGTACATTTTAAGGCATATTCCCTTCTAAGGAAAGTCGGCGGAAGT
TTAAAGGGATTGTAATAGCAAATTTTCATGATTTGAAATTATCCCTCCTG
TCGATATTTCCAAATAACTCCCTTCGCGTTTGTCTCCGTCTCGGCTACCG
CAGCTACCGATCTCCCCAATTGGGTGTCAGTTGTGCTTGTAGGTCACTCT
TTTGATTTTGAGTTAGTTGTCAAGAAACTGGTTTGGAAGATTACATTGTT
GGCTTCTTTTTGGGGGAGGAGGGAGGGCAGGCAAGCTTCAAGCGGCTGTA
AATGCTTCAACCAAGGTCAAATCAATTTAAAAGGGTTCCCAATTTGACAT
TTGATACTCAGAGTTCACTTTTGGTGCATGATGCTCAGCTAAAATTCAAT
AGCGAAAAAAAATGTGTTTAGCTTCGTGACAGCTTGAAAAATTCTTCCAA
TATTTCGTGCTGACAAGAGACCTCAATTCAATTGTTTCTCAAGTCGTGAA
GGTTTTTAATGTATAACGGATGACATACGTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig3375:11276..17657+

>mRNA_H-paniculata_contig3375.9019.1 ID=mRNA_H-paniculata_contig3375.9019.1|Name=mRNA_H-paniculata_contig3375.9019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig3375:11276..17657+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGACCGCGTTCGCTGCTTCCGCCCTTGCCATGGTGGCCTCCACGGA
GGCTTTCGTACCACCAACAGCCGTGCGTGGGGCGCTTTGTCGTTCGAACT
CCCTTGAGACCTCCAGGGTAGCTTCCTCCGTGAAGGCGGCGCCCTCAATG
GAGTTTGCTGGCGGCCTCATCGGCGCAGCAGGACCGGAGCCCAACTCGAA
GAACTTTGACCCCCTTGGCTTTGCGGCGGCAAAGCCAGAGAACGTGCTTT
TCTACCGTGAGGCAGAGATCAAGATGAAGACCGCGTTCGCTGCTTCCGCC
CTTGCCATGGTGGCCTCCACGGAGGCTTTCGTACCACCAACAGCCGTGCG
TGGGGCGCTTTGTCGTTCGAACTCCCTTGAGACCTCCAGGGTAGCTTCCT
CCGTGAAGGCGGCGCCCTCAATGGAGTTTGCTGGCGGCCTCATCGGCGCA
GCAGGACCGGAGCCCAACTCGAAGAACTTTGACCCCCTTGGCTTTGCGGC
GGCAAAGCCAGAGAACGTGCTTTTCTACCGTGAGGCAGAGATCAAGCACG
GGCGCATGGCGATGTTGGGCATTTGCGGGCTGATCGTGCCAGAGTTTGTC
CGCGTGCCTGGGGATATTTACCAGGATGTTTCCGTCTTGGACGCACACAA
CGCCATGCACGGGCGCATGGCGATGTTGGGCATTTGCGGGCTGATCGTGC
CAGAGTTTGTCCGCGTGCCTGGGGATATTTACCAGGATGTTTCCGTCTTG
GACGCACACAACGCCATGGTGGAGAAGGGCCCCATGTGGCAGCTTCTGTT
CTGGATCTCGGTCGCGGAAATCCTTCTTTCCCCCACCGTCATCAACATGG
GCGAAAAGGACCGCGAGCCGGGAGACTTTGGCCTCGACCCCCTTAACGTC
TGCAAGGTGGAGAAGGGCCCCATGTGGCAGCTTCTGTTCTGGATCTCGGT
CGCGGAAATCCTTCTTTCCCCCACCGTCATCAACATGGGCGAAAAGGACC
GCGAGCCGGGAGACTTTGGCCTCGACCCCCTTAACGTCTGCAAGAACCCC
GAGAAGAAGGAACGGTACCAACTTGCGGAGCTGAAGAACGGCCGTTTGGC
GATGATGGCATTCAGCGGTGCCGTTACGCAAATGGCCCTGACCGGCCACG
GTTTCCCTTTCACGGGATAAAACCCCGAGAAGAAGGAACGGTACCAACTT
GCGGAGCTGAAGAACGGCCGTTTGGCGATGATGGCATTCAGCGGTGCCGT
TACGCAAATGGCCCTGACCGGCCACGGTTTCCCTTTCACGGGATAA
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