prot_H-paniculata_contig3372.9012.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3372.9012.1
Unique Nameprot_H-paniculata_contig3372.9012.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig3372.9012.1 vs. uniprot
Match: D7FUT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT7_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.410e-8
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:    2 LLLSSICELALLSKGCFFVVAAVNNWRTVSLFSTMPGRLYLEALLALEELLPSLAILMLTEKRKG 66
            L+L+++C LA+ SKG   V AA+NN  T +LF    GR  LEAL+ALEEL+PS+AI  LT + KG
Sbjct:  207 LVLTAVCGLAMCSKGALLVAAALNNSDTSALFPPSLGRYRLEALMALEELVPSIAIAYLTARGKG 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3372.9012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUT7_ECTSI1.410e-853.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3372contigH-paniculata_contig3372:4444..6272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3372.9012.1mRNA_H-paniculata_contig3372.9012.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3372 4444..6272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3372.9012.1 ID=prot_H-paniculata_contig3372.9012.1|Name=mRNA_H-paniculata_contig3372.9012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MLLLSSICELALLSKGCFFVVAAVNNWRTVSLFSTMPGRLYLEALLALEE
LLPSLAILMLTEKRKGSSPPRQPPLLLSHPSQMGSDSDFAPYMNSPSLLS
SGAFLPTPDL
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