prot_H-paniculata_contig33690.9006.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33690.9006.1
Unique Nameprot_H-paniculata_contig33690.9006.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
[Close]
BLAST of mRNA_H-paniculata_contig33690.9006.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.150e-11
Identity = 56/175 (32.00%), Postives = 77/175 (44.00%), Query Frame = 0 
Query:    2 CHRQVGLLVHKHGKPYNAGVHFAFRQANTVEERRQLEAERANGGPDWQRYRKLSPDILK---GLFPTQGPPPAPPLQTADGMVVGAAASLGD-----AAGDGDSGDDGKPKLHNDAESPP------------------------------LYVAVQGWSHHRPNDSTIGFRPRGA 138
            CHRQVGL++ + GK    G  FA R A T+E+ R +E ERA GG  W R+   + D L    G +P              G++VGA+   G      A G+   GD+G   L   A +PP                              L+VA+QGW+ H  +D  + F+PRGA
Sbjct:  540 CHRQVGLVMQR-GKSLRVGCRFALRVAETLEDERAIEKERAEGGVQWSRFEMPADDELDLDLGAYP--------------GLLVGASRPRGQEEQRSATGEAGGGDNGV-FLPGIAAAPPAAAGAEKAXXXXGDGXXXXXXXGSECDASSLFVALQGWAKHDVDDPEVRFQPRGA 698
[Close]
BLAST of mRNA_H-paniculata_contig33690.9006.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.570e-10
Identity = 48/159 (30.19%), Postives = 69/159 (43.40%), Query Frame = 0 
Query:    2 CHRQVGLLVHKHGKPYNAGVHFAFRQANTVEERRQLEAERANGGPDWQRYRKLSPDILK---GLFPTQGPPPAPPLQTADGMVVGAAASLG-------------------DAAGDGDSGDDGKPKLHNDAESPPLYVAVQGWSHHRPNDSTIGFRPRGA 138
            CHRQVGL++ + GK    G  FA R A T+E+ R +E ERA GG  W R+   + D L    G +P       P  Q       G A                       +A      G+       ++ ++  L+VA+QGW+ H  +D  + F+PRGA
Sbjct:  463 CHRQVGLVLQR-GKSLRVGCRFALRVAETLEDERAIEKERAEGGVQWSRFEMPADDELDLDLGAYPGLLVGAKPRGQEEQRSATGEAGXXXXXXXXXXXXXXXXXXXGTEEAVSSSGDGNXXXXXXGSECDASSLFVALQGWTKHDVDDPEVRFQPRGA 620
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33690.9006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV42_ECTSI2.150e-1132.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LHH7_9PHAE2.570e-1030.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33690contigH-paniculata_contig33690:278..1300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33690.9006.1mRNA_H-paniculata_contig33690.9006.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33690 278..1313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33690.9006.1 ID=prot_H-paniculata_contig33690.9006.1|Name=mRNA_H-paniculata_contig33690.9006.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MCHRQVGLLVHKHGKPYNAGVHFAFRQANTVEERRQLEAERANGGPDWQR
YRKLSPDILKGLFPTQGPPPAPPLQTADGMVVGAAASLGDAAGDGDSGDD
GKPKLHNDAESPPLYVAVQGWSHHRPNDSTIGFRPRGANG
back to top