prot_H-paniculata_contig33569.8986.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33569.8986.1
Unique Nameprot_H-paniculata_contig33569.8986.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
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BLAST of mRNA_H-paniculata_contig33569.8986.1 vs. uniprot
Match: A0A6H5K0N2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0N2_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.260e-29
Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 0 
Query:    2 LQLRFKLRGGDKGKTFSQAISDEANAAGVELHGLLHDGIETMGKNECATFVVKTD-------DGHGDDGAQP---RLLEYELSLDDWIEEVDVSEGHDRSLVKRILREGDGSTKPVDVGRV 112
            LQL F+L G D+ + F Q +  +ANAAGVELH LLH GIETMG+NE ATFVV  +       +   D  ++P   R  EY +SLDDW+EEVD+SE  D SL+KR++REGDG T+PV++G V
Sbjct:  145 LQLEFRL-GEDEEEGFPQEVLQQANAAGVELHPLLHCGIETMGRNELATFVVTAEGVVAGAQENAADSSSKPPADRRFEYVISLDDWMEEVDLSERQDNSLMKRVVREGDGVTRPVEIGGV 264
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BLAST of mRNA_H-paniculata_contig33569.8986.1 vs. uniprot
Match: A0A8J9S0N6_9CHLO (Peptidyl-prolyl cis-trans isomerase FKBP62 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0N6_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 3.540e-5
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 0 
Query:   38 DGIETMGKNECATFVVKTDDGHGDDGAQPRL-----LEYELSLDDWIEEVDVSEGHDRSLVKRILREGDGSTKPVDVGRVFIRY 116
            +G++T  K E A    K D  +G+ G+ P++     L +E+ L  W    D++   D  ++K IL EG G TKP D     +RY
Sbjct:   99 EGVKTFKKGEKALLTCKADYAYGEQGSPPKIPPNATLNFEVELLSWKSVKDIA--GDGGVIKTILTEGSGWTKPKDQDEALVRY 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33569.8986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0N2_9PHAE3.260e-2953.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J9S0N6_9CHLO3.540e-533.33Peptidyl-prolyl cis-trans isomerase FKBP62 n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33569contigH-paniculata_contig33569:1613..2375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33569.8986.1mRNA_H-paniculata_contig33569.8986.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33569 1613..2375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33569.8986.1 ID=prot_H-paniculata_contig33569.8986.1|Name=mRNA_H-paniculata_contig33569.8986.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
NLQLRFKLRGGDKGKTFSQAISDEANAAGVELHGLLHDGIETMGKNECAT
FVVKTDDGHGDDGAQPRLLEYELSLDDWIEEVDVSEGHDRSLVKRILREG
DGSTKPVDVGRVFIRY
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