prot_H-paniculata_contig335.8972.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig335.8972.1
Unique Nameprot_H-paniculata_contig335.8972.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig335.8972.1 vs. uniprot
Match: D8LT90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT90_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 2.290e-26
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:    1 MGLLAWVQRHYYHYSISTGTYSFYPAERVMVNAFTMTLFCLIAYYIVRGVWFGVLCVGELVS 62
            MGL++WV+RHYYHY+ISTGTYSFYP ERV+VNAFT TLF L AYY  R  WFG L +G+L+S
Sbjct:    1 MGLVSWVKRHYYHYTISTGTYSFYPVERVLVNAFTFTLFSLTAYYAARSAWFGALFIGDLIS 62
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig335.8972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT90_ECTSI2.290e-2670.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig335contigH-paniculata_contig335:10544..10747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig335.8972.1mRNA_H-paniculata_contig335.8972.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig335 10300..11246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig335.8972.1 ID=prot_H-paniculata_contig335.8972.1|Name=mRNA_H-paniculata_contig335.8972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MGLLAWVQRHYYHYSISTGTYSFYPAERVMVNAFTMTLFCLIAYYIVRGV
WFGVLCVGELVSQAKVA*
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