prot_H-paniculata_contig335.8971.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig335.8971.1
Unique Nameprot_H-paniculata_contig335.8971.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length733
Homology
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BLAST of mRNA_H-paniculata_contig335.8971.1 vs. uniprot
Match: D8LT88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT88_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.010e-9
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 0 
Query:  112 ETRGLERQLAAAMAAAAHAEEEAAICTEDTAKAMENLRDARAAQRHAELWLEKSLAEVDAVHAILEY 178
            E R LE +L AA+ AAA AE+ AA   ED +K    +R++RA QRHAELWLEKSLAEVDAVHA+L Y
Sbjct:   99 EVRVLETRLKAALEAAARAEDSAAASIEDVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAY 165
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BLAST of mRNA_H-paniculata_contig335.8971.1 vs. uniprot
Match: A0A6H5KQ27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ27_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 9.530e-8
Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 
Query:  548 DCYTHFAQLDQDRQKDKIVNLVHEARSKMNMSGKEVKDEAGAGSGPGSWVKRASINDCGRGRGLPGEKGLWVHTYRNLTEEVSSLIQLFEEKLSEFTDDNTQLRNFCAHLEGLLA 662
            D + H+A++ Q++Q+ +I+ LV +AR KM           G G  P S                    G       N + EV+SLI+ F+EKLS   ++NTQLR FC+HLEGLLA
Sbjct:  498 DWFAHYARVGQEKQEAEILRLVRDAREKMVSGXXXXXXXXGCGGKPASXXXXXXXXXXXXXXXXXXGCGT-----SNPSTEVASLIRQFDEKLSRSLEENTQLRVFCSHLEGLLA 607
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig335.8971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT88_ECTSI1.010e-962.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ27_9PHAE9.530e-836.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..133
NoneNo IPR availableCOILSCoilCoilcoord: 47..67
NoneNo IPR availableCOILSCoilCoilcoord: 451..478

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig335contigH-paniculata_contig335:2295..7739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig335.8971.1mRNA_H-paniculata_contig335.8971.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig335 597..9308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig335.8971.1 ID=prot_H-paniculata_contig335.8971.1|Name=mRNA_H-paniculata_contig335.8971.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=733bp
MWNNERTLLNRKLAEADARARETAEGFSSLEEFTALQQALATRDATIEDL
RRVVRAKEAACDRLRFEAACDATKDGDLDRLMVRVACLEKNLAEERDKRK
AAEVELKAIAVETRGLERQLAAAMAAAAHAEEEAAICTEDTAKAMENLRD
ARAAQRHAELWLEKSLAEVDAVHAILEYSDRTALRAAATGGCAVLSPAKT
VELSTQTPNPPSPDFARMGVNSGEGRQQETHTAVGPGAQTPRPPSPAIMR
VGASLDNEGRAVPVGGGHFKSPAGSQISPIRTPDQRDTTMPLLFSASKRL
GSSAVTERGWKEENDCIFMTDYEIEQETGTGGCGSRARFNSSSPPTPTVL
FEDVPIERRRTCEEGQVTMSSSHKKVYLSPNGVADEKTANTELESKVDNK
GNAPFHRLAVPGASNGHTPSEKNGMNVAINGQPGGTDSKAASLLLWHSFF
LRYEMNRREKAEARAAQLEIEVEHAAIEKAATSGGGPVLAGDLGQVANPF
TSKDTVSGSINDARQRESCRGCACGSGGHHSLTLPGATNTSDFGATADCY
THFAQLDQDRQKDKIVNLVHEARSKMNMSGKEVKDEAGAGSGPGSWVKRA
SINDCGRGRGLPGEKGLWVHTYRNLTEEVSSLIQLFEEKLSEFTDDNTQL
RNFCAHLEGLLALRGDDRKIKLSAECGLGIGVSTSSREDGTSTFSWNKGV
NGATNERNYAHPAMSGQQRRGSPFPLPDQEWC*
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