prot_H-paniculata_contig3345.8961.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3345.8961.1
Unique Nameprot_H-paniculata_contig3345.8961.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length855
Homology
BLAST of mRNA_H-paniculata_contig3345.8961.1 vs. uniprot
Match: D7G201_ECTSI (Sel1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G201_ECTSI)

HSP 1 Score: 771 bits (1991), Expect = 7.960e-264
Identity = 514/870 (59.08%), Postives = 624/870 (71.72%), Query Frame = 0
Query:    1 GQNVPSTTSAALNRFKGMNLRSGSTGRAVTPRLVSMVTGATTSHKEGSSSNNDGHIMTGRRSPQTSAPERNSGSGDEMVPPPLLLEVPVCAEAEESLTESTAPQEKLMAAIFDDSNEENSNVEDGDSERGENQGALDQEDQEYAASPRSNWAATLMASTMARAKSTGKLTAIGSSAHMLPHPQDFKAKVDYLIVVCKAAETYASSQTAKLIKVRDGQHMISQLQDVAMDLGRQRDKILAVYDTREVQRSTDRLGQTLKEVYELIGDIEGTGVMFGKKKAFGKRVNALVHDIGTNANALLAATSLAIADRSTVLYKNDMDAGEPPAPQQEELAKKCIEGDKFFFGRGDKLSHSKAYEAYSWAAERGFAEAMYMIAWMYRAGT-HVEADAEQCQLWLERAVDEGYAPAINDLAVILLAEADQLEEAYPEIKTDAIDLALLGSGGSGGSNDEEGCTGV---DENGRGDTNRLFDEHKERMSWSEKTKEEKSGVHANLDEDIEME----SIPPEQANILDQVVGRRKRAMQLLQEAAKMGHTEAMTNLGNMNEAMGYLEEARTWYSLAADPSESANNARAQNYLGTLFYEGRGVAKDLQEAVKWFRRSARQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYMLARDALHTLATAARQAPSGVR-------ACGKGLKFEDPSKGLMQMGKASTKSSSEAWRKTTAQLREAADLFRRAADNGVMDASYQLGRLYQQGLGIPVDPVAAFENFLVAAEGRVVHPTAATCVGDMLYTGIGCLQNYAEAMRFYFRAANAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERGDPLSAFVNAAG 855
            G  + S TSAAL R KGM LRSG++GR + PR V++V+G  +  +     +NDG   T            + G  +     P + +       ++     T   ++ ++ +FDD   E SN E+G +E G +  +    D   AA+PRS WAATLMAST+AR K+TGK   + +   +LPHP++   K++YL++VCKAA+ YAS+Q A+L +VRDGQHMI+QL+DVA DLGRQ +K+LAVYDTREV+ S DRLG+TLK VY+L+GD+EGT +MFG+K+ FGKRV ALVHDIGT ANALLAATSLAIADR  VLY  D   GEPPAPQQ+EL K CIEGDKFFFGRG+  + SKA+EAY+WAAERG AEAMYM+AWMYR G+  V+ADAEQCQ WLERAVD+GYAPA+NDLA  LL +AD+ E A+PE+K D     ++    +  ++   G T     D++  G +                          +    +E E    S+PPE A + +QV+ +RKR+MQLLQ+AAK GHTEAMTNLGNM EAMGY E+AR+WYSLAA PSESANN RAQNYLGTLFYEGRGV KD  EAVKWFR SARQG     XXXXXXXXXXXXXXXXXXXXXXXXXXXX          LAY+LARDALH LA AARQAP G+          G GL+FEDPS+G+M+    S+++SS+AWR++TAQLREAADLFRRAAD+G+ DASYQLGRLYQQGLGIP++PVA+FENFL AA+G VVHPTAA CVGDMLYTG GCL++Y  A+R+Y RAA+AGE       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERGDPLSA  +AAG
Sbjct:   76 GSRLLSATSAALTRVKGMTLRSGTSGRVLNPRSVTLVSGLLSPSRGKKGVDNDGADRTSEEDRSRKDRPFSQGHVENDKSAPWVQD-----PGQDDDGGGTKSNKQKLSVLFDD---EESNAENG-TEEGASIPSTSTNDSN-AATPRSKWAATLMASTLAREKATGKAM-VRNRVDLLPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEKMLAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQRWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVAAADVIADSPTDDADRGLGATRPPTPDDHTSGGSEEXXXXXXXXXXXXXXXXXXXXXXXXDGGRQVEAEEDASSLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKDRDEAVKWFRLSARQGFPQACXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALHALAAAARQAPPGLDQRNLSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPLEPVASFENFLAAADGEVVHPTAAACVGDMLYTGTGCLRDYGAALRYYVRAAHAGEATSANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERGDPLSAIASAAG 934          
BLAST of mRNA_H-paniculata_contig3345.8961.1 vs. uniprot
Match: A0A836CC33_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC33_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 1.130e-117
Identity = 269/692 (38.87%), Postives = 352/692 (50.87%), Query Frame = 0
Query:  148 RSNWAATLMASTMARA-------KSTGKLTAIGSSAHMLPHPQDFKAKVDYLIVVCKAAETYASSQTAKLIKVRDGQHMISQLQDVAMDLGRQRDKILAVYDTREVQRSTDRLGQTLKEVYELIGDIEGTGVMFGKKKAFGKRVNALVHDIGTNANALLAATSLAIADRSTVLYKNDMDAGEPPAPQQEELAKKCIEGDKFFFGRGDKLSHSKAYEAYSWAAERGFAEAMYMIAWMYRAGTHVEADAEQCQLWLERAVDEGYAPAINDLAVILLAEADQLEEAYPEIKTDAIDLALLGSGGSGGSNDEEGCTGVDENGRGDTNRLFDEHKERMSWSEKTKEEKSGVHANLDEDIE--MESIPPEQANILDQVVGRRKRAMQLLQE-------------------------AAKMGHTEAMTNLGNMNEAMGYLEEARTWYSLAADPSES-ANNARAQNYLGTLFYEGRGVAKDLQEAVKWFRRSARQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------LAYMLARDALHTLATAARQAP-----SGVRACGKG-LKFEDPSKGLMQMGKAS---------------------TKSSSEAWRKTTAQLREAADLFRRAADNGVMDASYQLGRLYQQGLGIPVDPVAAF 745
            RS WA TL+ ST + A                      +P  +D   KVD+L+ VCK+ E YA    AKL  VR G  +I  L+D   DL RQRDKILAVYDT EV+RS DRLG TL  V+E++ D+E    MFG+KK FGKRV ALV ++GTNAN+LLAATSLAIADR  +LY  D D G PP  + EEL ++C+EGD++++GR    +  KA+ AY WAAERGF EA YM+AWMY+ G  V ADAE+C  WLERAV+ GYAPA+N+LA++LL EA+ +  A+PE++    +LA   +       D  G                             ++ +    A L         ++ PE A         RKRA  LLQ                          AA++GH +AM +LG++ E  G +  AR WY LAA P +  ANNARAQN+LG +++ GRG A+D +EA +WF+R+A+QG                                                                           LAY+LAR+ALH L   A Q        G    G+G ++FEDP +G M+  +AS                     T S+++  R+ T QL EAA+LFRRAAD G  DASYQLGRLY+QGLG+PVDP+AAF
Sbjct:  288 RSRWAQTLLLSTTSSAFKGXXXXXXXXXXXXXXXXXATMPREEDVGNKVDFLVAVCKSTEVYAKQLEAKLGTVRSGVALIEGLRDTHADLKRQRDKILAVYDTLEVRRSADRLGTTLTHVFEVLSDVERAARMFGRKKGFGKRVQALVQELGTNANSLLAATSLAIADRPQMLYMVDADDGAPPKHKLEELIQRCLEGDRWYYGREGPPNFEKAHAAYLWAAERGFGEAQYMLAWMYKHGHFVTADAERCTHWLERAVERGYAPAMNELALLLLEEAEGISAAWPEVQAAFDELASKAADA-----DAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXARDVRGSAAAALGATQRRLQRTLSPEAAAKFAAAAELRKRAQSLLQRVRLCVRREVRCVRQLCAAAVPAAVSAARLGHADAMASLGSLLEEAGRVRAARRWYELAAAPGDGGANNARAQNFLGRMYHSGRGAARDPREAARWFKRAAKQGLAAACNNLGLCYEAGAGVQKVGAGKRKVCRRFADTSPFCMDAATGAARASAHDTSKAIELYRQGVEGGSASACGNLAYLLAREALHALGCLAGQGTPLRGDGGALQWGRGGMQFEDPQRGAMESPEASAAASQCTLARCVSPLDVPLETTMSAADVRREMTRQLLEAAELFRRAADAGSADASYQLGRLYEQGLGMPVDPMAAF 974          
BLAST of mRNA_H-paniculata_contig3345.8961.1 vs. uniprot
Match: UPI0018CCA9D7 (SEL1-like repeat protein n=2 Tax=Psychrobacter TaxID=497 RepID=UPI0018CCA9D7)

HSP 1 Score: 57.4 bits (137), Expect = 9.550e-5
Identity = 38/125 (30.40%), Postives = 56/125 (44.80%), Query Frame = 0
Query:  484 SGVHANLDEDIEMESIPPEQANILDQVVGRRKRAMQLLQEAAKMGHTEAMTNL--------GNMNEAMGYLEEARTWYSLAADPSESANNARAQNYLGTLFYEGRGVAKDLQEAVKWFRRSARQG 600
            S V    ++ I  +  P  Q    +  +  +KRA+  LQE A+ G+T AM  L        G   +     E    W   AA    S N++RAQ  L  +FY+G GVA+D+     W  ++A  G
Sbjct:  346 SNVLEQFEQHIAKQKKPRAQIVFSESHLAAKKRALLKLQEVARAGNTAAMLRLAIYELLDEGIAADKSAATESGTAWVKQAA----SKNDSRAQRLLSKMFYQGLGVAQDIDNGKYWLEQAAENG 466          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3345.8961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G201_ECTSI7.960e-26459.08Sel1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CC33_9STRA1.130e-11738.87MYND-type domain-containing protein n=1 Tax=Tribon... [more]
UPI0018CCA9D79.550e-530.40SEL1-like repeat protein n=2 Tax=Psychrobacter Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 795..830
e-value: 9.0E-7
score: 38.5
coord: 602..637
e-value: 2.5E-8
score: 43.7
coord: 530..561
e-value: 110.0
score: 4.7
coord: 566..601
e-value: 2.6E-10
score: 50.2
coord: 721..756
e-value: 4.9E-4
score: 29.4
coord: 332..366
e-value: 120.0
score: 4.2
coord: 759..794
e-value: 0.0062
score: 25.8
coord: 367..402
e-value: 6.2E-5
score: 32.4
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 515..529
e-value: 23.0
score: 5.8
coord: 723..753
e-value: 0.0029
score: 18.3
coord: 367..402
e-value: 1.8E-4
score: 22.1
coord: 566..601
e-value: 6.0E-8
score: 33.1
coord: 602..637
e-value: 3.5E-5
score: 24.3
coord: 766..793
e-value: 0.11
score: 13.2
coord: 706..719
e-value: 130.0
score: 3.5
coord: 795..830
e-value: 5.4E-5
score: 23.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 308..433
e-value: 3.8E-13
score: 50.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 677..852
e-value: 2.6E-35
score: 123.8
coord: 504..674
e-value: 2.0E-39
score: 137.3
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 348..649
coord: 548..845
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 343..415
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 704..844
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 511..643

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3345contigH-paniculata_contig3345:8011..15891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3345.8961.1mRNA_H-paniculata_contig3345.8961.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3345 8011..15891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3345.8961.1 ID=prot_H-paniculata_contig3345.8961.1|Name=mRNA_H-paniculata_contig3345.8961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=855bp
GQNVPSTTSAALNRFKGMNLRSGSTGRAVTPRLVSMVTGATTSHKEGSSS
NNDGHIMTGRRSPQTSAPERNSGSGDEMVPPPLLLEVPVCAEAEESLTES
TAPQEKLMAAIFDDSNEENSNVEDGDSERGENQGALDQEDQEYAASPRSN
WAATLMASTMARAKSTGKLTAIGSSAHMLPHPQDFKAKVDYLIVVCKAAE
TYASSQTAKLIKVRDGQHMISQLQDVAMDLGRQRDKILAVYDTREVQRST
DRLGQTLKEVYELIGDIEGTGVMFGKKKAFGKRVNALVHDIGTNANALLA
ATSLAIADRSTVLYKNDMDAGEPPAPQQEELAKKCIEGDKFFFGRGDKLS
HSKAYEAYSWAAERGFAEAMYMIAWMYRAGTHVEADAEQCQLWLERAVDE
GYAPAINDLAVILLAEADQLEEAYPEIKTDAIDLALLGSGGSGGSNDEEG
CTGVDENGRGDTNRLFDEHKERMSWSEKTKEEKSGVHANLDEDIEMESIP
PEQANILDQVVGRRKRAMQLLQEAAKMGHTEAMTNLGNMNEAMGYLEEAR
TWYSLAADPSESANNARAQNYLGTLFYEGRGVAKDLQEAVKWFRRSARQG
NAQACQNLGICHQAGLGVPKDMPKAAQLFRQAVEGGSIPATNNLAYMLAR
DALHTLATAARQAPSGVRACGKGLKFEDPSKGLMQMGKASTKSSSEAWRK
TTAQLREAADLFRRAADNGVMDASYQLGRLYQQGLGIPVDPVAAFENFLV
AAEGRVVHPTAATCVGDMLYTGIGCLQNYAEAMRFYFRAANAGEPAAANS
VGLMHELGRGVARDLSVAAAWYARAAELGSADGAFNAALLLERGDPLSAF
VNAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf