prot_H-paniculata_contig33440.8958.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33440.8958.1
Unique Nameprot_H-paniculata_contig33440.8958.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.760e-10
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            K+F  T+LGE SL+LGME+ R+++  TL +SQ+ Y  SIL+RF MS    T TP   ++ S     D+LLD   T +YQ
Sbjct:  141 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQ 219          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.110e-9
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            K+F  T+LGE SL+LGME+ R+++  TL +SQ+ Y  SIL+RF +S    T TP   ++ S     D+LLD   T +YQ
Sbjct: 1370 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQ 1448          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.690e-9
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            K+F  T+LGE SL+L ME+ R+++  TL +SQ+ Y  SIL+RF MS    T TP   ++ S     D+LLD   T +YQ
Sbjct:  701 KRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQ 779          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.830e-9
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            K+F  T+LGE SL+LGME+ R+++  TL +SQ+ Y  SIL+RF MS    T TP   ++ S      +LLD   T +YQ
Sbjct: 1535 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQ 1613          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.740e-9
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            ++F  T++GEV L+LGME+ R++  GTL +SQ+ Y  SIL+RF MS    T TP   ++ S     D+LL    T  YQ
Sbjct:  678 QRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQ 756          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.230e-8
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    9 KKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSA-ASNGDSLLDGAATEEYQ 87
            K+F  T+LGE SL+LGME+ R+++  TL +SQ+ Y  SIL+RF MS    T TP   ++ S      D+LLD   T +YQ
Sbjct:  527 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNNIQPEDTLLDEKETRKYQ 606          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KER0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.310e-8
Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   10 KFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            KF  T++GEV L+LGME  R +  GTL +SQ+ Y  SIL+RF MS    T TP   ++ S     D+LL    T  YQ
Sbjct:  655 KFKMTDMGEVKLVLGMETKRERNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRPYQ 732          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 7.210e-8
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0
Query:   11 FTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            F  T++GEV L+LGME+ R+   GTL +SQ  Y  SIL+RF MS    T TP   ++ S     D+LL    T  YQ
Sbjct:  234 FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQ 310          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.120e-7
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   11 FTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            F  TN+GEV L+LGM++ ++   GTL +SQ+ Y  SIL+RF MS      TP   ++ S     D+LLD   T  YQ
Sbjct:  819 FKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQ 895          
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.880e-7
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   10 KFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDRFNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQ 87
            +F  T++GEVSLILGM+V  + + GTL +SQ+ Y+ +IL+R  M + +  KTP    + S     D LL  A T+ YQ
Sbjct: 1514 RFEMTDMGEVSLILGMQVTCSYEEGTLTVSQNNYIKTILERVGMENPNPVKTPGYGPELSTDQPADKLLGAADTKLYQ 1591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33440.8958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE2.760e-1045.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.110e-944.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE3.690e-944.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J842_9PHAE3.830e-944.30Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KL37_9PHAE6.740e-943.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KMG0_9PHAE1.230e-845.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KER0_9PHAE2.310e-844.87CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KPN4_9PHAE7.210e-844.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K129_9PHAE1.120e-742.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRS9_9PHAE2.880e-742.31Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33440contigH-paniculata_contig33440:538..951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33440.8958.1mRNA_H-paniculata_contig33440.8958.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33440 83..1416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33440.8958.1 ID=prot_H-paniculata_contig33440.8958.1|Name=mRNA_H-paniculata_contig33440.8958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MDVCYQFMKKFTTTNLGEVSLILGMEVLRNKQTGTLQLSQDKYVLSILDR
FNMSSVDLTKTPSIKTDPSAASNGDSLLDGAATEEYQANGRKSHLPDSVY
KIRHLLQRHPSSTVHECTNPTALGGSKAYSSLFAGLL*
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