prot_H-paniculata_contig3343.8956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3343.8956.1
Unique Nameprot_H-paniculata_contig3343.8956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length477
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3343.8956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 410..458
e-value: 1.9E-6
score: 27.9
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 410..458
score: 9.122
NoneNo IPR availableGENE3D3.30.60.180coord: 404..464
e-value: 2.0E-7
score: 32.7
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 405..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3343contigH-paniculata_contig3343:1525..6321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3343.8956.1mRNA_H-paniculata_contig3343.8956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3343 399..7904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3343.8956.1 ID=prot_H-paniculata_contig3343.8956.1|Name=mRNA_H-paniculata_contig3343.8956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
MCKQRRRNNQVSDRVVNPVELSKMSSSSVKEEQLRAWDAAVEAARRRAYQ
PAPADVLIPWTIANLAATEFCTAAPFPAVNRITLFLRTTLGAMEIARKLN
SDFFVGMKMVMVQEPSGDKDVRNAGFSSSISASLASITGQIELAIEKAPG
DHMYDCNVLLLTNTIPETRSALESLASFFPPGCSSIVAHDVVSREIRTVM
GHMTLMRRTGVERTVSSASNLTTIFELHDVNAPVFESPKGREPHGIGLKV
VARCVVAYRDGSQWSSVGPTVSSIAVRRDYQGFALIQDLFNVVEAWMVDS
WRLDTIFSNRILKATKLMDVIVDRVLDEDELGGPHQELQFTDKIFFFEVM
GFTVNRSLPTGLTAGVLPSRITSSPPESEAIKYYPPTGTKISLPSVNYVS
VSLPNLWRSCDNCRRLSEDTDNGRLLVCGGCPGPNYWAAHYCSHFCQRAD
WNCHKLWCHKTYDEVCSAKAAVEGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND