mRNA_H-paniculata_contig1139.891.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1139.891.1 vs. uniprot
Match: D8LRR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRR3_ECTSI) HSP 1 Score: 135 bits (340), Expect = 8.710e-31 Identity = 56/130 (43.08%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 775 HRVSKRKVLDCHHLQGCELELDDPGCEPHGYTGKLQDDMIVCLCECGQTLSGAQWVEHAGGKNTDSQSVSPFKYLRVVGTRENMAGHIQKCDANENLCDTCQSYEAPGAPMTLCWECRTAVHKTAECSVR 1164 HR+ R + CHHLQG LE+ D G L I+CLC CG T+ G W+EH GG++++ P+KY+R+V T+E ++ H CD + NLCD+C +E+PG PMT CW+C T+VH + +C++R Sbjct: 253 HRLRPRDRVHCHHLQGQVLEMYDEEYRGRKKQGILDGQAIICLCGCGITMKGGHWLEHNGGRSSNRHPGYPWKYMRIVETKEMLSNHWPVCDTHPNLCDSCLLWESPGLPMTTCWKCHTSVHASEDCAMR 382 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1139.891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1139.891.1 >prot_H-paniculata_contig1139.891.1 ID=prot_H-paniculata_contig1139.891.1|Name=mRNA_H-paniculata_contig1139.891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp ATFEGFPFPLLEEMVAHASALHKKATTSGMVDSSIDVGRYFARAYGLGLGback to top mRNA from alignment at H-paniculata_contig1139:18624..28031- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1139.891.1 ID=mRNA_H-paniculata_contig1139.891.1|Name=mRNA_H-paniculata_contig1139.891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9408bp|location=Sequence derived from alignment at H-paniculata_contig1139:18624..28031- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1139:18624..28031- >mRNA_H-paniculata_contig1139.891.1 ID=mRNA_H-paniculata_contig1139.891.1|Name=mRNA_H-paniculata_contig1139.891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3366bp|location=Sequence derived from alignment at H-paniculata_contig1139:18624..28031- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |