prot_H-paniculata_contig33188.8902.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig33188.8902.1
Unique Name	prot_H-paniculata_contig33188.8902.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	369

Homology

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 708 bits (1827), Expect = 2.280e-257
Identity = 351/368 (95.38%), Postives = 357/368 (97.01%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            MVA+LERRE EKRDWGTFATWITSTENRLYIGWFGCLM PTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFL+GVA +MGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV+G
Sbjct:    1 MVATLERRE-EKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 703 bits (1815), Expect = 1.540e-255
Identity = 343/368 (93.21%), Postives = 356/368 (96.74%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            MVA+LERRE EKRDWGTFATWITSTENRLYIGWFGCLM PTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEA SIEEWLYNGGPYQL+VFHFL+GVA +MGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLT+LG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVA+SAPS++G
Sbjct:    1 MVATLERRE-EKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEALSIEEWLYNGGPYQLVVFHFLIGVACWMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 671 bits (1732), Expect = 6.870e-243
Identity = 330/368 (89.67%), Postives = 345/368 (93.75%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            M A+LERR++    W  F  WITSTENRLYIGWFGCLMFPTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNII+GAVIPSSNAIGIHFYPIWEAAS++EWLYNGGPYQLIV HFLLGVASYMGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:    1 MTATLERRQSVSL-WERFCGWITSTENRLYIGWFGCLMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIITGAVIPSSNAIGIHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 659 bits (1700), Expect = 5.160e-238
Identity = 322/368 (87.50%), Postives = 342/368 (92.93%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            M A+LERRE+    W  F  WITSTENRLYIGWFGC+MFPTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIGIH YPIWEAASI+EWLYNGGPYQLIV HF +GV +YMGREWELSYR       LGMRPWIFVAFSAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:    1 MTATLERRESVSL-WERFCGWITSTENRLYIGWFGCVMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGIHLYPIWEAASIDEWLYNGGPYQLIVLHFFIGVCTYMGREWELSYR-------LGMRPWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 654 bits (1687), Expect = 7.730e-236
Identity = 318/368 (86.41%), Postives = 341/368 (92.66%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            M A+LERRE+    W  F +WITSTENRLYIGWFG +M PTLLTA SC+II FIAAPPVDIDGIREPVAGSL+YGNNIISGAVIPSSNAIG+HFYPIWEAAS++EWLYNGGPYQLIV HFLLGVASYMGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+TA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVA+SAP+V G
Sbjct:   13 MTATLERRESISL-WERFCSWITSTENRLYIGWFGVVMIPTLLTATSCFIIGFIAAPPVDIDGIREPVAGSLMYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 646 bits (1667), Expect = 5.510e-233
Identity = 316/366 (86.34%), Postives = 337/366 (92.08%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 366
            M A+LERRE     W  F +WITSTENRLYIGWFG LM P LLTA SC+II FIAAPPVDIDGIREPVAGSLLYGNNIISGA++PSSNAIGIHFYPIWEAAS++EWLYNGGPYQLIVFHFLLGVA +MGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTALG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++AP+V
Sbjct:    1 MTATLERREGTSL-WERFCSWITSTENRLYIGWFGVLMIPLLLTATSCFIIGFIAAPPVDIDGIREPVAGSLLYGNNIISGAIVPSSNAIGIHFYPIWEAASLDEWLYNGGPYQLIVFHFLLGVACWMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: Q5SFY7_9PHAE (Photosystem II protein D1 (Fragment) n=10 Tax=Phaeophyceae TaxID=2870 RepID=Q5SFY7_9PHAE)

HSP 1 Score: 637 bits (1644), Expect = 3.810e-230
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 0

Query:   14 DWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVM 339
            DWG FATWITSTENRLYIGWFGCLM PTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAAS+EEWLYNGGPYQLIVFHFLLGVASYMGREWELSYR       LGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSE+ES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLT+LGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVM
Sbjct:    1 DWGHFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYR-------LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVM 319

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A7S3LAS1_9STRA (Photosystem II protein D1 n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAS1_9STRA)

HSP 1 Score: 640 bits (1652), Expect = 8.430e-230
Identity = 314/366 (85.79%), Postives = 335/366 (91.53%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 366
            M  SL ++E EK  W  F+ WITST+NRLYIGWFG LMFPTLL A +C+I AFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+H YP+WEAASI+EWLYNGGPYQLIV HFLLGVASYMGREWELSYR       LGMRPWIF AFSAPVAAA+AVFL YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVA VFG SLFSAMHGSLVTSSLIRET+E ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLG+EVMHERNAHNFPLDLAS +++PVA+ APSV
Sbjct:   57 MPDSLAKKE-EKSTWEKFSNWITSTDNRLYIGWFGTLMFPTLLAATACFITAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGMHLYPMWEAASIDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYR-------LGMRPWIFTAFSAPVAAATAVFLTYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAAVFGASLFSAMHGSLVTSSLIRETTENESTNAGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGIEVMHERNAHNFPLDLASGDMIPVAMEAPSV 414

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: PSBA_EMIHU (Photosystem II protein D1 n=71 Tax=root TaxID=1 RepID=PSBA_EMIHU)

HSP 1 Score: 638 bits (1646), Expect = 8.720e-230
Identity = 311/366 (84.97%), Postives = 334/366 (91.26%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 366
            M  +LERRE+    W  F  WITSTENRLYIGWFGCLMFPTLL+A S YIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAASI+EWLYNGG YQL+V HF +GV +Y+GREWELSYR       LGMRPWI VAFSAPVAAA+AVF+IYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL AWPVVGIW TA+GV+TMAFNLNGFNFNQSVVDS+GRVINTWADI+NR++LGMEVMHERNAHNFPLDLA+ E LPVA+ AP+V
Sbjct:    1 MTTTLERRESASF-WEQFCAWITSTENRLYIGWFGCLMFPTLLSAISAYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGVHFYPIWEAASIDEWLYNGGTYQLVVLHFFIGVCAYIGREWELSYR-------LGMRPWICVAFSAPVAAAAAVFVIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFTAMGVATMAFNLNGFNFNQSVVDSQGRVINTWADILNRSNLGMEVMHERNAHNFPLDLAAGESLPVALVAPAV 358

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BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Match: A0A8J7E2H2_9CYAN (Photosystem II protein D1 n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7E2H2_9CYAN)

HSP 1 Score: 637 bits (1643), Expect = 2.500e-229
Identity = 306/368 (83.15%), Postives = 336/368 (91.30%), Query Frame = 0

Query:    1 MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYRXXXXXXRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVIG 368
            M  +L  RE+E   WG F  WITST NRLY+GWFG LM PTLLTA  C++IAF+AAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQLI+FHFL+GV SY+GR+WELSYR       LGMRPWI VA+SAPV+AASAVFLIYP+GQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL++ET+EVES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASF+NSRALHFFLAAWPVVGIW TALGVSTMAFNLNGFNFNQSV+DS+GRV+NTWADI+NRA+LG EVMHERNAHNFPLDLAS E  PVA++APS+ G
Sbjct:    1 MTTTLTTRESEST-WGRFCEWITSTNNRLYVGWFGVLMIPTLLTATICFLIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFLIGVFSYLGRQWELSYR-------LGMRPWICVAYSAPVSAASAVFLIYPMGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVQETTEVESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFSNSRALHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVLDSQGRVVNTWADILNRANLGFEVMHERNAHNFPLDLASAEAAPVALTAPSING 360

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig33188.8902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBA_ECTSI	2.280e-257	95.38	Photosystem II protein D1 n=1129 Tax=Eukaryota Tax...	[more]
A0A1N7TJI8_9PHAE	1.540e-255	93.21	Photosystem II protein D1 n=412 Tax=Eukaryota TaxI...	[more]
PSBA_PHATC	6.870e-243	89.67	Photosystem II protein D1 n=590 Tax=root TaxID=1 R...	[more]
A0A023JEK8_9STRA	5.160e-238	87.50	Photosystem II protein D1 n=4 Tax=Bacillariophyta ...	[more]
A0A7S2RD40_9STRA	7.730e-236	86.41	Photosystem II protein D1 n=1 Tax=Rhizochromulina ...	[more]
A0A451FLR3_9STRA	5.510e-233	86.34	Photosystem II protein D1 n=179 Tax=Eukaryota TaxI...	[more]
Q5SFY7_9PHAE	3.810e-230	95.71	Photosystem II protein D1 (Fragment) n=10 Tax=Phae...	[more]
A0A7S3LAS1_9STRA	8.430e-230	85.79	Photosystem II protein D1 n=2 Tax=Amphora coffeifo...	[more]
PSBA_EMIHU	8.720e-230	84.97	Photosystem II protein D1 n=71 Tax=root TaxID=1 Re...	[more]
A0A8J7E2H2_9CYAN	2.500e-229	83.15	Photosystem II protein D1 n=1 Tax=Lusitaniella cor...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 29..327 e-value: 8.7E-88 score: 293.9
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..360
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 199..225
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 150..304 e-value: 1.6E-24 score: 88.4
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 15..351
IPR005867	Photosystem II protein D1	TIGRFAM	TIGR01151	TIGR01151	coord: 1..368 e-value: 3.1E-228 score: 754.4
IPR005867	Photosystem II protein D1	HAMAP	MF_01379	PSII_PsbA_D1	coord: 1..355 score: 56.721
None	No IPR available	PANTHER	PTHR33149:SF11		coord: 1..360
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 173..206
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 130..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 77..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..129
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 279..303
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 274..278
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 150..172
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..76
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 207..232
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 304..368
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 233..252
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 253..273
None	No IPR available	TMHMM	TMhelix		coord: 31..53
None	No IPR available	TMHMM	TMhelix		coord: 110..129
None	No IPR available	TMHMM	TMhelix		coord: 205..227
None	No IPR available	TMHMM	TMhelix		coord: 150..172
None	No IPR available	TMHMM	TMhelix		coord: 278..300

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig33188	contig	H-paniculata_contig33188:565..1671 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig33188.8902.1	mRNA_H-paniculata_contig33188.8902.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig33188 565..1671 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig33188.8902.1 ID=prot_H-paniculata_contig33188.8902.1|Name=mRNA_H-paniculata_contig33188.8902.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MVASLERRETEKRDWGTFATWITSTENRLYIGWFGCLMFPTLLTAASCYI
IAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEA
ASIEEWLYNGGPYQLIVFHFLLGVASYMGREWELSYREWELSYRLGMRPW
IFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNI
LMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESINYGYKFGQE
EETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVST
MAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLD
LASNEILPVAISAPSVIG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000484	Photo_RC_L/M
IPR036854	Photo_II_D1/D2_sf
IPR005867	PSII_D1