mRNA_H-paniculata_contig3306.8874.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig3306.8874.1
Unique Name	mRNA_H-paniculata_contig3306.8874.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 2.070e-174
Identity = 397/636 (62.42%), Postives = 439/636 (69.03%), Query Frame = 1

Query:    1 RTIEATRATLRNGGSQDHDYIALYSAGRVCAHKLPDHIRNRYMHLAILPRHVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVTSNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYADSIRAYRSYAKWATSTVPPPSVGRRSPSCRRVLRDHTVPRLPCAWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAAETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPKTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGVLTRENGESYENNWKWERI--TPPPPEAQAEKEAREGTGAEGSTPAMGGGEGAVVNGMINGGGDGGKKR--------------ELYRWRHTEAVQLLERALAVHRETLGDDHAVTEESMQALTAAGGSPTMLLIAPASAAPPLA--------------VMGAVRASQRPFPISAGDPLPGGV-------VDPPPPSLECLASLDTERVLTEEEXXXXXXXXXXXXXVEWEQAQAQKL 1797
            RT++++R+ L+NG SQD DY++LYSAG+VC  KLPDHIRNRY+HLAILP+HVPAPEQMLESLWDTESDEVFDEVL+KL SHALLQPV I+GDQGR+GHVTSNT MD+IL +AA ETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAY DSIRAYRS  KWA+ T P PS  R     RR  R HT P   CAW AWR L+ SRA   S+RSCTVFG RHPAVAAETNVLAVFLVEHGRN EAEACYR SMEIWERTL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQD   AERLHREALAI                       LKTGP +     G     +  S ++ W+WE++  +  PP ++        TG   S          +  G+  GGG                    E YRWRHTEA++LLERALAVHRETLGDDH VTEES+QAL AAGGS T +  +P+S    ++                 A  ++ R  P   G P P          VDPPPPSLECL S D  R      XXXXXXXXX    V+WEQ QAQKL
Sbjct:  810 RTVDSSRSLLQNGASQDPDYVSLYSAGKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYRSSGKWASLTAPLPSGVRPWRWFRRDPRGHTAPSPLCAWPAWRGLQRSRASPRSRRSCTVFGSRHPAVAAETNVLAVFLVEHGRNREAEACYRNSMEIWERTLGPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDSTAAERLHREALAIXXXXXXXXXXXXXXXXXXXXXXXLKTGPTTTHSPVGGGKPSSKTSADDKWQWEKVKASKAPPSSE--------TGLSSS----------LFKGLRLGGGXXXXXXXXXXXXXXXXXXXGESYRWRHTEAIKLLERALAVHRETLGDDHPVTEESLQALAAAGGSSTPVTPSPSSRPSSISREVGLAVXXXXXXXXXXAAVSTPRSGPAGGGQPSPAATTGSRPTSVDPPPPSLECLNSSDHARETAX--XXXXXXXXXHEQRVKWEQDQAQKL 1425

[Close]

BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 8.160e-124
Identity = 361/716 (50.42%), Postives = 396/716 (55.31%), Query Frame = 1

Query:   79 GRVCAHKLPDHIRNRYMHLAILPRHVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVTSNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYADSIRAYRS-----------------------------------YAKWATSTVPP--------------------------------------------------PSVGRRSPSCRRVLRD-------------------------HTVPRLPC--------AWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAAETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPKTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGVLTRENGESYENNWKWERITPPPPEAQAEKEAREGTGAEGSTPAMGGGEGAVVNGMINGGGDGGKKRELYRWRHTEAVQLLERALAVHRETLGDDHAVTEESMQALTAAGGSPTMLLIAPASAAPPLAVMGAVR-----------------ASQRPFPISAGDPLPGGV--------VDPPPPSLECLASLDTERVLTEEEXXXXXXXXXXXXXVEWEQAQAQKL 1797
            G +C  KLPDHIRNRY+HLAILP+HVPAPEQMLESLWDTESDEVFDEVL+KL SHALLQPV I+GDQGR+GHVTSNT MD+IL +AA ETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAY DSIRAYR                                    Y K A + V                                                    P   R      ++LR                          H+     C        A +    L     RR+   +  VFG RHPAVAAETNVLAVFLVEH                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDP  AERLHREALAIREARLGR+HPEVAQTCHNLALLLLKT P +     G        S ++ W+WE++ P   EA    E    +     +   GG                    E YRWRH EA++LLERALAVHRETLGDDH VTEES+QAL AAGGS T +  +P+S   P ++   V                  A+ R  P   G P P           VDPPPPSLECL S D       E+             V+WEQ QAQKL
Sbjct: 1311 GTLCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAMDYYKEALARVEARTEHDRAKPQTQSFSAQVLKGIARCLVAEGQLEEAEERFQKAMSMENTRNPGASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVASLAGLAAQQGKPALSEELYRRSLGVALRVFGSRHPAVAAETNVLAVFLVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPTAAERLHREALAIREARLGRNHPEVAQTCHNLALLLLKTEPTATHSPVGGGKPSPKTSADDKWQWEKVKPS--EALPSSETGPSSSLLKGSRMGGGXXXXXXXXXXXXXXXXXXXXESYRWRHKEAIKLLERALAVHRETLGDDHPVTEESLQALAAAGGSSTPVTPSPSSR--PSSISREVSLAVDATXXXXXXXXXXXATPRSGPAGGGQPSPAXXTTGSRPTSVDPPPPSLECLNSSDHALETAREQQRQQQREYEQR--VKWEQDQAQKL 2020

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRB0_ECTSI	2.070e-174	62.42	NB-ARC and TPR repeat-containig protein n=1 Tax=Ec...	[more]
A0A6H5LG27_9PHAE	8.160e-124	50.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3306	contig	H-paniculata_contig3306:311..10177 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	552.4
Seed ortholog evalue	2.7e-154
Seed eggNOG ortholog	2880.D8LRB0
KEGG ko	ko:K10407,ko:K19360
KEGG Pathway	ko05132,map05132
Hectar predicted targeting category	other localisation
EggNOG free text desc.	determination of stomach left/right asymmetry
EggNOG OGs	COG0457@1,KOG1840@2759
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019,ko03036,ko04812
Exons	11
Model size	1797
Cds size	1797
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3306.8874.1	prot_H-paniculata_contig3306.8874.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig3306 311..10177 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig3306:311..10177+
coding sequence from alignment at H-paniculata_contig3306:311..10177+

protein sequence of mRNA_H-paniculata_contig3306.8874.1

>prot_H-paniculata_contig3306.8874.1 ID=prot_H-paniculata_contig3306.8874.1|Name=mRNA_H-paniculata_contig3306.8874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
RTIEATRATLRNGGSQDHDYIALYSAGRVCAHKLPDHIRNRYMHLAILPR
HVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVT
SNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMG
RCGLVSCWAEVEKRFGFTALEAYADSIRAYRSYAKWATSTVPPPSVGRRS
PSCRRVLRDHTVPRLPCAWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAA
ETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLGPYSPELASGLNNLAIL
LFMEDRPGEAAATFQRSLDIRQRVLPPDSLETAQGLNNLALLYTSQGQDP
KTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGV
LTRENGESYENNWKWERITPPPPEAQAEKEAREGTGAEGSTPAMGGGEGA
VVNGMINGGGDGGKKRELYRWRHTEAVQLLERALAVHRETLGDDHAVTEE
SMQALTAAGGSPTMLLIAPASAAPPLAVMGAVRASQRPFPISAGDPLPGG
VVDPPPPSLECLASLDTERVLTEEEQEQQQLEIEQQKRVEWEQAQAQKL

mRNA from alignment at H-paniculata_contig3306:311..10177+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig3306.8874.1 ID=mRNA_H-paniculata_contig3306.8874.1|Name=mRNA_H-paniculata_contig3306.8874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9867bp|location=Sequence derived from alignment at H-paniculata_contig3306:311..10177+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGACTATCGAGGCGACTCGTGCAACGTTACGAAACGGGGGCTCTCAAGA
CCACGACTACATCGCGCTATACAGCGCGGGAAGGGTGCGTTATTGTTGTG
GTCATGATCCATTTCTGGTGATGGTGGTAGTTGTTTGTTTGGGAACAAGT
CGTGGAACTCCTTTGAATATGAACTGGTAGAGTACCTGAGGATTGATTTT
GGAGGAACTGTATAAACTGAACGCAATATTGCTGTGCAGGGGGGGGGGGG
GTATCATTGATCTATGGATGAGCATGACCTGCAAGTAAATGGTGGTTACA
GATATTGCTGTTGAATCATTTTTTGTGTTTTTTCGCGGTAAAGTATATAT
TTCCCTGTATTTTCAGTATTTTTCTTTGTTTTTTTTTTCGGTCTTGTTAC
CAACTACCATGGCCAGGTGTGCGCGCACAAACTCCCGGACCATATCCGCA
ATCGGTATATGCATTTGGCCATCCTGCCCCGACATGTGAGTGGTGTTGGT
GACCCCAGCGGGTCTGAAAATATATATGTCGCTAACTAAGTAGAGGCACG
GCTGTGCTGGTGCAGTTCGCGCCTTGCTTCCTTGGCTTCCTCGATAGACG
CGCAAAGATTTGATTTGAAGAGATTACCTGGGCACAGAGTAGGAAAAAAA
AATCCGAATTAAGGACAACGACGATATTGCACCATTTTTTAAGTACTTGT
TATCCAAGCATGCTGCTGTAGTGGCTCGGTTTAGTACCCCTTCGGGTGCC
GAAGATTGTATCGAGCCAAAAGTTAGAACATATGAAAAAATAGAGATACT
TTGGTAAAATGCTCAAGTATGGAAGCATCGGTTAAGGTTTTTGCCTCAGC
CTTCCAGGGGTTAAAATGTATATATATATGTGTGTGTTACGTATGAAAAT
AGATACCTTGTTTTATCTTGCGTACTGCTGAACACAACTTGTGTGTGTGT
GTGTGTGTTGATTTTCGTGGTGCAGGTGCCTGCACCGGAGCAAATGCTGG
AGTCGCTGTGGGACACCGAGAGTGACGAAGTGTTCGATGAGGTAGGCGTT
TCGTGGCAATCTTGGAGTAGCGTATATAGTAGGTGATCGATCCTGTATGA
AGGTACATACCGAGAAAAGTGTAATTCATTCACTGTTAGTACCATATGCA
CTACTCCAATACGGGATCCTTTTGTTAAATTCCATTGTAAGTAGATTTCG
AGGTACTGTACGCATTACTCAAATGCGGGGTCCATATCCTAAATCCTAAT
GCCAGGAAAAGAGGCAATGAAAGACCGTACACCGTCAAACAGACCCCTTC
CCCCCCTTTTTTTAATGACATATCACAAACAAATATAAAGAAAGACCCGT
CCTCGTCACCCAAGGCGTTTTGTATGTACTCGATGGGAGCAATTGCTCAC
AGCGGGCGGTCCTAGTCATTCTATTTTTTTTTGTATTGGTGTTCGATATG
CTCGTGACCTTGCAACGCTGCACTAGTAATCAGATAGGAAATTTTGCGAC
GTTTTTTTTTTTTTAAATACGTATTCGAAGCTTAATGTTTAGCTCGCTTT
TTTTTCCGTGTTTTTTCTTGTTATGAGATGTTGATTGCGGGACGTGACAG
TCATTGTCTACTGTGACGGTTCCATCCGCAATCCCCGGGGTTATGTAATG
TAGCCTCAATCGGAGCTGAGAGCGGCAACCACGCAGCATGTTGCCGCCCC
ATCAGCTGTCAGACTTGGATCAACCCAGGGCTGACCCTGACAGTGTAGCA
ATATCCAGCTTATACAAGAGACCAGACCATTGCCAAGGACTACTTCGACC
ACCCCAGCCGTACCGTTCTGAGAGTACTATATAGCTTAGTCAGTAGCAGG
ACACAACAACCTACGTGTGTGAGATAGTCCTAAACTGCACTGCCGTTATC
ACCACATTTCTTCCTCCGCAGGTTCTGGATAAACTTTGCTCCCACGCGTT
GCTTCAGCCCGTTGCCATCATGGGCGACCAAGGCCGCAACGGACACGTGA
CGTCTAACACGCTGATGGACTTCATTTTAGAATCGGTAAGTCATGCACAC
ATGAAGACAATCGACTACTGTTGTGCAGTGTAGTGTATGCTTGCAAGAAA
ACATGAGCACATGAGACTGTGTATTAACGAAGTTAAAACACAAATGGAGA
TCGAAATCGAAATCGAAATCAAATTTGATATTCAAACAAATGCCCTTTGC
TGTATTAATGATACGCAGGTTGTCAGACAAGCGGCGTTACAAAAAATACA
AAATACACCTTATAACGCGGCGCGAAGGCTCGAACACAGGGCTCCTATAG
CTCGTAACCCCTTTTTTAAGATAGCGATTAAGACTACAATACAACGTCCG
CCTCTCAGGGGAAACGATGCACCCTCCTCCGAGCAGCATCGTCAGGTATT
CATCGAAGCGCCGGAGAGGGGAGCGTGCACCCGTGCATTTGGCCGGTGGT
TGCTAGCTTTATTCCTCTACAAGTGTGATGTGCCTCAAATTGCGATTTAC
ATAAAGTCTAGAGCCATTTTCCTACATCGAAATGCGAAACAGAATTTACT
GGGGTGCTCGAAGAGGCAGACCAATTACAAGAGGCTAGAGATTTTTTTTT
TTTTTCACCTCGTCATAATACATGGCCTTACTATTATCATCACCATTTTC
ATTGATATTAACCACTTTATCCCGATCACGCAGACCCGCGGTCAGATGAC
AGAAGTTCCCCGTGACAACACTTGGAATCTACTTGCTTGTGTCTTGTATC
TGACTGCGGGACGGATCAACAGGACTGACTTTGGTCAAAGAAAACAATTC
TTGTTGGCAGTGCATGTCCGTTCGTTTGATGGCGGTCACACTATAGCCTA
AATCAACTACACAATAACATATATATATTTCAACATTGATATATTTATTT
ATTTTTGTCGGGGGGGGGTTTCACGTGTTGTTTTAGTATTAGTATTATTG
TATTTAGTCATGATTTTTTGTATTGCTTCTCCTTTTGTTTTTCCAAGGCC
GCTGCGGAGACAGTCGAGCACGCGGCCGCCCGCATGTCGTTGTACTTGGG
GAGACTGAAGGTGCTCAAGAGCGGCCTGGGGCGCAAGGCGGGCGGCAAGT
ACCTCGCCATGGGACGATGTGGGCTAGTATCATGCTGGGCCGAGGTGGAG
AAGCGCTTCGGGTTCACGGCGCTTGAGGCTTATGCCGACAGTATTCGGGC
TTATAGGTGTGGTCTATCTTTCATGTACCGTAGAACTCGGAGGTAGGCGT
CAAGAGCACCAGGGTGCGAAAGATTTTTAGCGCGGATATCTCGAAAAGTA
CGGTTGGTGCTACTGGAAACGAATAGTGTGATTGCTCTTGAAAAGGACAT
CTGTTGATTGGTGCGTTCTATCGATCGCGTGCGGTCGGCGTTCTCGATAA
TCGCGCTTGAAAAACGCTCGCACCCCGGTGCAATACCTCCGGGCTTTACG
GTAGTTCTTGTTCACGTATCTGTCGTGGTTGTTGGTGCCTTGTGGGTAGG
TGAGTGGGTTAGGTTTGTATGTGGGATTGGAGTTGCGCCTCTAGAAATTT
AATATTTCCGATTGAGTTTATTATCGATTAGCGTTGTTGTCCCTTTGAGT
CGTCAACTGTGCATTTACCCATCCATATACAACCCCCAGTTTTTATGAAG
ACGAGGTTATGAAAAATTTTCTCCGTTGGAATAAAGTCCCGTCTTGTCTT
GTATGAGGTATGTAATACTAGGAAAGAAACATACAGTATTTTTAATAATC
GCCCCTTGTACTGTTGTCTATATATATATATTTATATTTTTGGTAATATG
TTAGTTACTTTATTAGCCTGTAGCGCTGCAAAACTCAGACATGGGTAAGG
TAACCCGTGAACTGAGCATGACTGGAAGTCTAGTCAGAGGTCTTTTGGTG
GGTGCAACCCCCACGCTGCCTATTTGGTTCGGCCAAACCGGGGTGGCGCC
TACCTCGCAGAGGAATAAATAGCTCTATTCTGTTAAAAGGAAATGTAGAC
ATACTTCGGTAAAAATACTCAAGTATGGAAAGCACCGGATAAAGGTTTTT
GCCTCAGCCTTCCGGGGGTTAAAGAAACAAACTCAGACATGATTTTTTTT
GCGGCGTTTTTTTACGCTATTTTCAATATATTGTAAATTTTGCTGTCTGG
TAACAGGGAAAAGGCGGTGGCATCGGGGCAGGGGTCGAGCCTTAAGCTGG
CAGCGGCAGTGAAGCTGCTGGCCGACTACCTGTTCTTAACGGATGAGAAG
GTGTCGGCGCTGGAGTACTATAAGGAGGCGTTGGCGAGAGTGGAGGCAAG
GACGGAGCACGACCGCGCCAAGCCGCAGACACAATCGTTCACGGCACAGG
CAAGACTTGAAAATATGAATCTTTAAGTAATAAAAAAAAAAGAGGGGGGA
GCGATGCGATAGATGTACGCCATGAATAGTAGAGACAGGCCAGGGTTGTG
CTAGTGTCGTGCATACGTAACTAACTCAGGAATCCTGGTGATAATTAGTA
TAATTATAACGCATTAACGTCTTCCACGCAGAAATGAATACCTTGGCATG
CTGATCTTGTCATCATTTCTCTTTCTTTTTCTCTCATCTACGGTATGTCA
TTAGTACAGTGTAAAGAAAGGCGTGGAGATAAACGGCCTTCCTTCTTGCT
CACTTTTTTTTTTTTTTTTTTTGGACGAGTTTTGTATTGAGTTGTTGGAT
GCCCGCGTATTTTTCGCTCTAAAAACTGTCAGCTACACGTTTTCATGTGG
CATTCGTAGTTTTTGGTTTGTTTATTGTCTCTTTCAAACCTTGGAGTGCC
GAATCCGTTTTTTTTGTTTTTTTTCTGACATCATACTAGGAAATCATAAA
CAAAAAAAGAAAACTCAGATCTCCCCCCCCCCCCCTTTAATGATTTAATT
TTGCTGATAATGATATATAACTGTGGATTGACGTCAGTTGCATAACCCCC
CACACACACACACACACACACACACACTTAAAAAACTATATGAACGAGAA
AGAACAGTTGTAAGTACTGGTTCATATTTTTACGGATGATATAATTGGTA
CATTACTGCAAATAACGTAACACTCAACTCATCTCCTCCCCAAAACACAC
ACACACACACAGGTGCTGAAGGGTATCGCTAGGTGCCTGGTAGCCGAAGG
CCAACTCGAGGAGGCCGAGCAGCGCTTCCAAAAAGCGATGAGCATGGAGA
ACGCGCGCAACCCAGGGGCGTCCAAGGCGATGCTGGAGTATTGTCAGATC
TTACGCCAAATGGGCCACTTCGACCGTGCCTCCGCCGTCGGTGGGCAGGC
GCTCGCCCTCGTGCAGACGGGTCCTACGGGACCACACAGTGCCGAGGCTG
CCGTGTGCGTGGCGAGCTTGGCGGCGCTTGCGGCTCAGCAGGGCAAGGCG
AACCTCTCAGAGGAGTTGTACAGGTAAAGAGACAGAGGGGGTGAACACAT
GAACACATTGACTTTTGAATAAATTCAACGGATATTTGGGTTTGTTGCTC
GGTAGATGAACAGGATCCATTTTGACCCTGTCATGATCAAATACCAGATA
GGATACGCAAAACAGGTGTCAACCACCAATTGGCAACGTAGGAAAGAACA
ATTGGTCATTATCCATCAGAAGTCGCTCTGAAAGGAACAAAGCTCCGTCC
TCCCGAGGACTAGCCAGTATCATACGTGATGATTGGTCTAGTAACTACAA
CATGCAAAATATGAGTACCCCCGCCCTGGTGCAAAATGTGTTGTAAACTT
GGCCGATAAAAGGCGGTCTTTGGCCGTAGCTTTGCGAGTTTTCGGGCCAA
GGCATCCCGCGGTGGCGGCCGAAACGAACGTTCTGGCAGTGTTCCTCGTG
GAGCACGGGCGCAATCACGAGGCGGAGGCATGCTACCGACAGAGCATGGA
AATCTGGGAGAGGACTCTCGGGCCCTATTCGCCTGAGTTAGCGTCTGGCT
TGAACAACCTGGCCATCTTGCTCTTTATGGAGGACCGACCGGGGTAAGAA
ATATGTTTTTGATTGTTTTGTGTAAATATATATATATATATATATATATA
TTGGTGTGTGTCATTACTCAACATGATAACGTGTGAGTAGCTCGTCGTTT
TTTCGGGACAGCTCTCCAAGTCTGTGCTCGAGTAATTCCTGAAACAGCTA
CCTTGATACGAGACAGCGAGCGTAGCGCGGGCAGCGAGTGAATGGCTTTT
GAGCACTGGCACGAACAGCGAGGGCGTAGCTGCAGCTCAAGGGTTAGGGT
TCCTCCCCCCCTCCCCTCCCTTGGACACACCAATGGTTGAAATAAACACG
TGATCCCATAAACCGCGGTACTGCACCATAGACTTACGTGTTAAATAGCA
CATCCTTCACAGAGAAGATTCAGCGGCCTTCTCTGACCCACTAGTATGCT
GCTGGCCTGCTGCGCCAAACTACCAACACAAACACAGAGAAGCGGCAGCG
ACGTTCCAGCGCAGCCTCGACATCCGACAGAGAGTCCTCCCGCCGGATAG
CCTGGAGACGGCGCAGGGACTGAACAACTTAGCCTTGCTTTACACGAGCC
AGGGGCAAGACCCAAAGACCGCGGAGCGTCTTCACAGGGAAGCGCTGGCG
ATTCGAGAGGCTAGGTTAGGCCGGAGCCATCCGGAAGTGGCTCAGACTTG
GTGAGGAGTTGGAATTTGTTTTTAACCTTGCCGTGGAAAAGTCGAGGGTT
GGAGAATGACTCGTGTACACTCAGTAGACTTGTTTGGTGCCGTGAAACAG
TCGAGCGGTGGAGAATAGCTCGTGTCCAGTATTCTTTTGGGGGCATGTGG
GGTGTTGGTTTACGTGCTGTAGGACGGGCATGACTACTTTCTCTCTCCCT
GATGTACACACACACACATACACATACACATATATGTTGATATTTCGTTC
GTTGATTTTGGTTGGATTTTTGGGTGATGAGTCGCTTTTCAGCAGTATTG
AGTGAAGTCTCCTGAGCGTGGCAGTTAGTGCGTCCGATTTATGTGATGCT
TTTTTATCGTCATGCTTTATAGTTTGTACCAGCTTGTAATTTTTAGCGCC
ATACAGCCCCTTCCGCCGCTCGATTTGATCTAATATTGCTGATAAGCATG
TACAAAGCTAACTGGGACTTGAAGGTCAGCTCCATAACCGCAAAATGGGT
GTCATACTTGTACTAAATACGGGCAGTGGGTTTGACTAGTGAATGAGGCT
CGAGGCGGGTGAACCGGGGTGTTTAATTTTTTTTTGTCATTAGTTCATGC
GAAAGCCATTCCCTCAAAAATTACGTTTTCGTACAGTGGTGCATACGCGA
GTGATATATACATAAATACGCTCTTGTTATGGATTCTACTATACTCCCTG
TCCCGCCCCCCCCCACCCCATCTACCTAACCCTGCCGTCCGCTACCCACT
GACCTTTCCTGCCCTTCCCCTCCCCCCACGCTCCCGCGAAAAAAAGTCAC
AACCTAGCCCTGCTGCTCCTCAAGACCGGGCCCGGTTCTGAGGGGAGGTC
AGGCGGTGTGTTGACGCGAGAAAACGGCGAGTCGTATGAGAACAACTGGA
AGTGGGAAAGGATCACGCCCCCGCCGCCAGAGGCACAAGCAGAAAAAGAA
GCCAGAGAAGGAACAGGAGCAGAAGGCTCGACACCGGCGATGGGGGGGGG
TGAGGGGGCGGTGGTTAACGGCATGATCAACGGGGGCGGCGATGGTGGCA
AGAAGCGGGAGTTGTACAGATGGCGGCACACGGAGGCCGTGCAATTGCTG
GAGCGGGCGCTGGCTGTGCATCGCGAGGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGCGAT
TCGCGTTGTTTGGGAGGAATTTGGTTTGGTTGAGGGAGGATCAGCAATCA
TCACCTGCTGCTGTGATATCTAGCGTACAGTGTTGCCGATGAGACACGAG
GGGTAAAAGGGAAATATAATTAGTTGAGAAGGGGGGGGTTAGACGTGCTT
TTTTTTTTTAGGGTTTCTTCAAATGAGCGGGTAAGAGTCAAGAGACGGAT
ATTACAGTATATATGTCATACGAAACTCGAGCGTGTCACTTTTTCTTCTT
TTTTTCCCCTCCTGTTGTGGTTACACAAGGCATTGCAAAAAACACCTTGT
GGGAGAGGGCAGAGAAGGTGGGGTGTGTGCTTGTTTTGGATCTAGGTGTC
TCTGTCGGGTGTTTTTCCCCTTTCATTGCGTCTACGCGATGGTTATGCAG
GAGGAGGGTGGAGGGGCGGCGTGAACGGATTTTGTGGGCAATTTGCTGCT
TGACAGAAGTAGCACCAGTATTGAGCGACACACGAAAATATGACACGTCT
GCCTGTTACACGACGACTGCCACACTTGCACTAAGTGACCCATTACCCGG
CGACTCTTCTCGACTATTTTCCCCCTCCCCTCCCCTCCCCTTCGCCCGCC
CGCCCGCCCGACCGACCGACCGACCGACCGATCGGCTTTTTTCCCTCGAT
GACGTCCTTGCTCTCTGTCTTGCTCCTCTTGTAATATTTCCCCAACATAT
TTGATCGTTGCCGTTGTTACCTGCTTCGTTTAACTGAACCCCCCCGCCCC
CCCTCTAATATATCTATACCACACGCAATATATAACAGACCTTGGGGGAT
GACCATGCCGTAACAGAGGAGTCGATGCAAGCCCTGACCGCGGCTGGCGG
CAGCCCAACAATGCTGTTGATAGCTCCAGCTTCGGCGGCGCCCCCTTTGG
CGGTGATGGGGGCAGTGAGAGCGTCACAAAGGCCTTTTCCGATCTCCGCA
GGCGATCCTCTACCCGGGGGTGTGGTGGATCCGCCGCCGCCGAGCCTGGA
GTGTCTGGCTAGCTTGGACACAGAGCGGGTCCTGACAGAGGAGGAGCAAG
AACAGCAGGTAGTGGTGCAGTACTGATAATGTGTGTGTGTTTTTTTTTTG
TTTTTTTTTTACTAAATAGTTTTTTTCCTCTTTTGTTTGTTGATCTTTTT
TGTTTGAAAACACCAAACTGAGTGTGGTCCTGTCTTGTCTTTTTTTGCTT
GCTTTGATCGATAATCGAGCAGATTTTGACTGTGGTGTTGATGTTGATGT
TGACGTTGATGTAAATGCTGACAGCCCGTCGAGACAGATTTAAATGCATA
TCGCGTTGTGCATCGTTTTATTTTTTCCCCGTGGATAGTTAGTTCTGCTA
TCTCACGCGGAATATGGGATATATGGGTCATGCACATCCATTTATTTACA
AAATGTACAAGAGCCGCAAAAGTTGAGATCTGGCTCGTGCATTTTTTTGT
AATCTAACGAAGATCGTGGTGTTATTTTCGCTCGATTATTCAAATTTTTT
ATATTTGACCTGTCGTGACTTCATCTGTTGTGTTGTAAGGCTTAGACTTG
CGGTTTTGTGCGGCTTCCTTGTTGAGTGAAGATTTTATGTTTATTTATAC
GGTATGGTAGGTACCCTCGGTGTTTCAGTATTATCCCGATGTACATGTAC
TGTACAGTATGCTCAGGCGACCACACACACACACACACACACACACACAC
ACACGCACATATAATAATGTGCGCAACGTACCCCCAGATGTATATATTCG
ACCTGTAGCACTAGCAACAACAGCCAGATGTGGAGCGGAAGTGCATGCAT
CTCCTCTTCCCCCAAAATTGTCTACCTATGCATGTGTACGTACATCCGTC
CGTGCGTGCTTGCAAAAAATTCAAGTTGCTTGTTTCATGGATACATACAC
GCGCGCAAAAAGTTGATTGTATGTTTTTGTTTGGGAACCTCGCAGCGCCA
GCAACAGCAGCTAGAGATAGAGCAGCAGAAGCGTGTAGAGTGGGAGCAGG
CGCAGGCTCAAAAATTG

Coding sequence (CDS) from alignment at H-paniculata_contig3306:311..10177+

>mRNA_H-paniculata_contig3306.8874.1 ID=mRNA_H-paniculata_contig3306.8874.1|Name=mRNA_H-paniculata_contig3306.8874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3594bp|location=Sequence derived from alignment at H-paniculata_contig3306:311..10177+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGACTATCGAGGCGACTCGTGCAACGTTACGAAACGGGGGCTCTCAAGA
CCACGACTACATCGCGCTATACAGCGCGGGAAGGAGGACTATCGAGGCGA
CTCGTGCAACGTTACGAAACGGGGGCTCTCAAGACCACGACTACATCGCG
CTATACAGCGCGGGAAGGGTGTGCGCGCACAAACTCCCGGACCATATCCG
CAATCGGTATATGCATTTGGCCATCCTGCCCCGACATGTGTGCGCGCACA
AACTCCCGGACCATATCCGCAATCGGTATATGCATTTGGCCATCCTGCCC
CGACATGTGCCTGCACCGGAGCAAATGCTGGAGTCGCTGTGGGACACCGA
GAGTGACGAAGTGTTCGATGAGGTGCCTGCACCGGAGCAAATGCTGGAGT
CGCTGTGGGACACCGAGAGTGACGAAGTGTTCGATGAGGTTCTGGATAAA
CTTTGCTCCCACGCGTTGCTTCAGCCCGTTGCCATCATGGGCGACCAAGG
CCGCAACGGACACGTGACGTCTAACACGCTGATGGACTTCATTTTAGAAT
CGGTTCTGGATAAACTTTGCTCCCACGCGTTGCTTCAGCCCGTTGCCATC
ATGGGCGACCAAGGCCGCAACGGACACGTGACGTCTAACACGCTGATGGA
CTTCATTTTAGAATCGGCCGCTGCGGAGACAGTCGAGCACGCGGCCGCCC
GCATGTCGTTGTACTTGGGGAGACTGAAGGTGCTCAAGAGCGGCCTGGGG
CGCAAGGCGGGCGGCAAGTACCTCGCCATGGGACGATGTGGGCTAGTATC
ATGCTGGGCCGAGGTGGAGAAGCGCTTCGGGTTCACGGCGCTTGAGGCTT
ATGCCGACAGTATTCGGGCTTATAGGCCGCTGCGGAGACAGTCGAGCACG
CGGCCGCCCGCATGTCGTTGTACTTGGGGAGACTGAAGGTGCTCAAGAGC
GGCCTGGGGCGCAAGGCGGGCGGCAAGTACCTCGCCATGGGACGATGTGG
GCTAGTATCATGCTGGGCCGAGGTGGAGAAGCGCTTCGGGTTCACGGCGC
TTGAGGCTTATGCCGACAGTATTCGGGCTTATAGATCTTACGCCAAATGG
GCCACTTCGACCGTGCCTCCGCCGTCGGTGGGCAGGCGCTCGCCCTCGTG
CAGACGGGTCCTACGGGACCACACAGTGCCGAGGCTGCCGTGTGCGTGGC
GAGCTTGGCGGCGCTTGCGGCTCAGCAGGGCAAGGCGAACCTCTCAGAGG
AGTTGTACAGATCTTACGCCAAATGGGCCACTTCGACCGTGCCTCCGCCG
TCGGTGGGCAGGCGCTCGCCCTCGTGCAGACGGGTCCTACGGGACCACAC
AGTGCCGAGGCTGCCGTGTGCGTGGCGAGCTTGGCGGCGCTTGCGGCTCA
GCAGGGCAAGGCGAACCTCTCAGAGGAGTTGTACAGTTTTCGGGCCAAGG
CATCCCGCGGTGGCGGCCGAAACGAACGTTCTGGCAGTGTTCCTCGTGGA
GCACGGGCGCAATCACGAGGCGGAGGCATGCTACCGACAGAGCATGGAAA
TCTGGGAGAGGACTCTCGGGCCCTATTCGCCTGAGTTAGCGTCTGGCTTG
AACAACCTGGCCATCTTGCTCTTTATGGAGGACCGACCGGGTTTTCGGGC
CAAGGCATCCCGCGGTGGCGGCCGAAACGAACGTTCTGGCAGTGTTCCTC
GTGGAGCACGGGCGCAATCACGAGGCGGAGGCATGCTACCGACAGAGCAT
GGAAATCTGGGAGAGGACTCTCGGGCCCTATTCGCCTGAGTTAGCGTCTG
GCTTGAACAACCTGGCCATCTTGCTCTTTATGGAGGACCGACCGGGAGAA
GCGGCAGCGACGTTCCAGCGCAGCCTCGACATCCGACAGAGAGTCCTCCC
GCCGGATAGCCTGGAGACGGCGCAGGGACTGAACAACTTAGCCTTGCTTT
ACACGAGCCAGGGGCAAGACCCAAAGACCGCGGAGCGTCTTCACAGGGAA
GCGCTGGCGATTCGAGAGGCTAGGTTAGGCCGGAGCCATCCGGAAGTGGC
TCAGACTTGAGAAGCGGCAGCGACGTTCCAGCGCAGCCTCGACATCCGAC
AGAGAGTCCTCCCGCCGGATAGCCTGGAGACGGCGCAGGGACTGAACAAC
TTAGCCTTGCTTTACACGAGCCAGGGGCAAGACCCAAAGACCGCGGAGCG
TCTTCACAGGGAAGCGCTGGCGATTCGAGAGGCTAGGTTAGGCCGGAGCC
ATCCGGAAGTGGCTCAGACTTGTCACAACCTAGCCCTGCTGCTCCTCAAG
ACCGGGCCCGGTTCTGAGGGGAGGTCAGGCGGTGTGTTGACGCGAGAAAA
CGGCGAGTCGTATGAGAACAACTGGAAGTGGGAAAGGATCACGCCCCCGC
CGCCAGAGGCACAAGCAGAAAAAGAAGCCAGAGAAGGAACAGGAGCAGAA
GGCTCGACACCGGCGATGGGGGGGGGTGAGGGGGCGGTGGTTAACGGCAT
GATCAACGGGGGCGGCGATGGTGGCAAGAAGCGGGAGTTGTACAGATGGC
GGCACACGGAGGCCGTGCAATTGCTGGAGCGGGCGCTGGCTGTGCATCGC
GAGTCACAACCTAGCCCTGCTGCTCCTCAAGACCGGGCCCGGTTCTGAGG
GGAGGTCAGGCGGTGTGTTGACGCGAGAAAACGGCGAGTCGTATGAGAAC
AACTGGAAGTGGGAAAGGATCACGCCCCCGCCGCCAGAGGCACAAGCAGA
AAAAGAAGCCAGAGAAGGAACAGGAGCAGAAGGCTCGACACCGGCGATGG
GGGGGGGTGAGGGGGCGGTGGTTAACGGCATGATCAACGGGGGCGGCGAT
GGTGGCAAGAAGCGGGAGTTGTACAGATGGCGGCACACGGAGGCCGTGCA
ATTGCTGGAGCGGGCGCTGGCTGTGCATCGCGAGACCTTGGGGGATGACC
ATGCCGTAACAGAGGAGTCGATGCAAGCCCTGACCGCGGCTGGCGGCAGC
CCAACAATGCTGTTGATAGCTCCAGCTTCGGCGGCGCCCCCTTTGGCGGT
GATGGGGGCAGTGAGAGCGTCACAAAGGCCTTTTCCGATCTCCGCAGGCG
ATCCTCTACCCGGGGGTGTGGTGGATCCGCCGCCGCCGAGCCTGGAGTGT
CTGGCTAGCTTGGACACAGAGCGGGTCCTGACAGAGGAGGAGCAAGAACA
GCAGACCTTGGGGGATGACCATGCCGTAACAGAGGAGTCGATGCAAGCCC
TGACCGCGGCTGGCGGCAGCCCAACAATGCTGTTGATAGCTCCAGCTTCG
GCGGCGCCCCCTTTGGCGGTGATGGGGGCAGTGAGAGCGTCACAAAGGCC
TTTTCCGATCTCCGCAGGCGATCCTCTACCCGGGGGTGTGGTGGATCCGC
CGCCGCCGAGCCTGGAGTGTCTGGCTAGCTTGGACACAGAGCGGGTCCTG
ACAGAGGAGGAGCAAGAACAGCAGCAGCTAGAGATAGAGCAGCAGAAGCG
TGTAGAGTGGGAGCAGGCGCAGGCTCAAAAATTGCAGCTAGAGATAGAGC
AGCAGAAGCGTGTAGAGTGGGAGCAGGCGCAGGCTCAAAAATTG