prot_H-paniculata_contig3306.8874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3306.8874.1
Unique Nameprot_H-paniculata_contig3306.8874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length599
Homology
BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 2.070e-174
Identity = 397/636 (62.42%), Postives = 439/636 (69.03%), Query Frame = 0
Query:    1 RTIEATRATLRNGGSQDHDYIALYSAGRVCAHKLPDHIRNRYMHLAILPRHVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVTSNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYADSIRAYRSYAKWATSTVPPPSVGRRSPSCRRVLRDHTVPRLPCAWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAAETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPKTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGVLTRENGESYENNWKWERI--TPPPPEAQAEKEAREGTGAEGSTPAMGGGEGAVVNGMINGGGDGGKKR--------------ELYRWRHTEAVQLLERALAVHRETLGDDHAVTEESMQALTAAGGSPTMLLIAPASAAPPLA--------------VMGAVRASQRPFPISAGDPLPGGV-------VDPPPPSLECLASLDTERVLTEEEXXXXXXXXXXXXXVEWEQAQAQKL 599
            RT++++R+ L+NG SQD DY++LYSAG+VC  KLPDHIRNRY+HLAILP+HVPAPEQMLESLWDTESDEVFDEVL+KL SHALLQPV I+GDQGR+GHVTSNT MD+IL +AA ETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAY DSIRAYRS  KWA+ T P PS  R     RR  R HT P   CAW AWR L+ SRA   S+RSCTVFG RHPAVAAETNVLAVFLVEHGRN EAEACYR SMEIWERTL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQD   AERLHREALAI                       LKTGP +     G     +  S ++ W+WE++  +  PP ++        TG   S          +  G+  GGG                    E YRWRHTEA++LLERALAVHRETLGDDH VTEES+QAL AAGGS T +  +P+S    ++                 A  ++ R  P   G P P          VDPPPPSLECL S D  R      XXXXXXXXX    V+WEQ QAQKL
Sbjct:  810 RTVDSSRSLLQNGASQDPDYVSLYSAGKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYRSSGKWASLTAPLPSGVRPWRWFRRDPRGHTAPSPLCAWPAWRGLQRSRASPRSRRSCTVFGSRHPAVAAETNVLAVFLVEHGRNREAEACYRNSMEIWERTLGPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDSTAAERLHREALAIXXXXXXXXXXXXXXXXXXXXXXXLKTGPTTTHSPVGGGKPSSKTSADDKWQWEKVKASKAPPSSE--------TGLSSS----------LFKGLRLGGGXXXXXXXXXXXXXXXXXXXGESYRWRHTEAIKLLERALAVHRETLGDDHPVTEESLQALAAAGGSSTPVTPSPSSRPSSISREVGLAVXXXXXXXXXXAAVSTPRSGPAGGGQPSPAATTGSRPTSVDPPPPSLECLNSSDHARETAX--XXXXXXXXXHEQRVKWEQDQAQKL 1425          
BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 8.160e-124
Identity = 361/716 (50.42%), Postives = 396/716 (55.31%), Query Frame = 0
Query:   27 GRVCAHKLPDHIRNRYMHLAILPRHVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVTSNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYADSIRAYRS-----------------------------------YAKWATSTVPP--------------------------------------------------PSVGRRSPSCRRVLRD-------------------------HTVPRLPC--------AWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAAETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPKTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGVLTRENGESYENNWKWERITPPPPEAQAEKEAREGTGAEGSTPAMGGGEGAVVNGMINGGGDGGKKRELYRWRHTEAVQLLERALAVHRETLGDDHAVTEESMQALTAAGGSPTMLLIAPASAAPPLAVMGAVR-----------------ASQRPFPISAGDPLPGGV--------VDPPPPSLECLASLDTERVLTEEEXXXXXXXXXXXXXVEWEQAQAQKL 599
            G +C  KLPDHIRNRY+HLAILP+HVPAPEQMLESLWDTESDEVFDEVL+KL SHALLQPV I+GDQGR+GHVTSNT MD+IL +AA ETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAY DSIRAYR                                    Y K A + V                                                    P   R      ++LR                          H+     C        A +    L     RR+   +  VFG RHPAVAAETNVLAVFLVEH                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDP  AERLHREALAIREARLGR+HPEVAQTCHNLALLLLKT P +     G        S ++ W+WE++ P   EA    E    +     +   GG                    E YRWRH EA++LLERALAVHRETLGDDH VTEES+QAL AAGGS T +  +P+S   P ++   V                  A+ R  P   G P P           VDPPPPSLECL S D       E+             V+WEQ QAQKL
Sbjct: 1311 GTLCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAMDYYKEALARVEARTEHDRAKPQTQSFSAQVLKGIARCLVAEGQLEEAEERFQKAMSMENTRNPGASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVASLAGLAAQQGKPALSEELYRRSLGVALRVFGSRHPAVAAETNVLAVFLVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQGQDPTAAERLHREALAIREARLGRNHPEVAQTCHNLALLLLKTEPTATHSPVGGGKPSPKTSADDKWQWEKVKPS--EALPSSETGPSSSLLKGSRMGGGXXXXXXXXXXXXXXXXXXXXESYRWRHKEAIKLLERALAVHRETLGDDHPVTEESLQALAAAGGSSTPVTPSPSSR--PSSISREVSLAVDATXXXXXXXXXXXATPRSGPAGGGQPSPAXXTTGSRPTSVDPPPPSLECLNSSDHALETAREQQRQQQREYEQR--VKWEQDQAQKL 2020          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3306.8874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB0_ECTSI2.070e-17462.42NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LG27_9PHAE8.160e-12450.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 564..594
NoneNo IPR availablePFAMPF13374TPR_10coord: 470..495
e-value: 2.0E-6
score: 27.5
NoneNo IPR availablePFAMPF13424TPR_12coord: 251..322
e-value: 2.1E-15
score: 56.8
coord: 332..390
e-value: 5.6E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 351..508
coord: 241..361
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 351..508
coord: 241..361
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 324..345
score: 37.27
coord: 245..262
score: 53.89
coord: 289..309
score: 36.67
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 291..324
e-value: 1.8
score: 17.6
coord: 333..367
e-value: 75.0
score: 7.3
coord: 249..282
e-value: 87.0
score: 6.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 25..110
e-value: 1.4E-8
score: 36.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 223..421
e-value: 2.1E-45
score: 157.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 243..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3306contigH-paniculata_contig3306:311..10177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3306.8874.1mRNA_H-paniculata_contig3306.8874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3306 311..10177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3306.8874.1 ID=prot_H-paniculata_contig3306.8874.1|Name=mRNA_H-paniculata_contig3306.8874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
RTIEATRATLRNGGSQDHDYIALYSAGRVCAHKLPDHIRNRYMHLAILPR
HVPAPEQMLESLWDTESDEVFDEVLDKLCSHALLQPVAIMGDQGRNGHVT
SNTLMDFILESAAAETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMG
RCGLVSCWAEVEKRFGFTALEAYADSIRAYRSYAKWATSTVPPPSVGRRS
PSCRRVLRDHTVPRLPCAWRAWRRLRLSRARRTSQRSCTVFGPRHPAVAA
ETNVLAVFLVEHGRNHEAEACYRQSMEIWERTLGPYSPELASGLNNLAIL
LFMEDRPGEAAATFQRSLDIRQRVLPPDSLETAQGLNNLALLYTSQGQDP
KTAERLHREALAIREARLGRSHPEVAQTCHNLALLLLKTGPGSEGRSGGV
LTRENGESYENNWKWERITPPPPEAQAEKEAREGTGAEGSTPAMGGGEGA
VVNGMINGGGDGGKKRELYRWRHTEAVQLLERALAVHRETLGDDHAVTEE
SMQALTAAGGSPTMLLIAPASAAPPLAVMGAVRASQRPFPISAGDPLPGG
VVDPPPPSLECLASLDTERVLTEEEQEQQQLEIEQQKRVEWEQAQAQKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR036388WH-like_DNA-bd_sf
IPR011990TPR-like_helical_dom_sf