|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1645 |
| Cds size | 855 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11385.886.1 >prot_H-paniculata_contig11385.886.1 ID=prot_H-paniculata_contig11385.886.1|Name=mRNA_H-paniculata_contig11385.886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MLTDTEYADGGDWGSEKKPLRARDDERSSFSSYSTTVAADDARGDLPLTN
RSNPPPETDSHSSPRATTKASTKFSDMDLLLPMSGGGDGDTDYHESDQDW
VYDGESLVDGYQGGRNKQHANRDAGSRMGRSADRSMDRSIVDQTNDSGVG
GASLNNQSNEEDDGSNSDLLVDELLSSASPMQAAPLLPATASATSATAAT
AAAGKEEDISSPPSPNIMSVESSTTESTEISSSTVGGEVGEAASASVSAM
KVVELKAKCKEMGLPVSGKKAELQQRILSAFGQS* back to topmRNA from alignment at H-paniculata_contig11385:2815..4735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11385.886.1 ID=mRNA_H-paniculata_contig11385.886.1|Name=mRNA_H-paniculata_contig11385.886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1921bp|location=Sequence derived from alignment at H-paniculata_contig11385:2815..4735- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAGCATGGCTTGGAAGAATTACTGGCTGGTATTGGGGAGTTTGAAGATA
GGCAAGGCGGGGCTGGTCAAGTGAGGGGGGTTGGAGGAGTTTCCCCTCCG
GGAAACGTTTCCTCGGGCCGTTCTCTAGGTTCTGCGGATGCTAGTTATTC
TACCGATAATAGTCCGAAGGAACGTCCTGTCGGTGGGTCTCCTGCGCGAA
AGGTGAGTTTTTTTGGTTTTTTTCTATTGCAAAACGTCCTTGGATGGAAC
GTTCTATTGGCCGAACGTGACTCGTTGTTTTTTCGTAGCTTTTGTTATCT
CTATGTACTCTAGTTTGTACGCAAAAAAGGAGAAAAAAAGCTAGAAGTTA
CTTGCTATTATAAGGACCGCAATGGTAGTCGTTTGATTAGGACCCCCGCC
TTCTTCCTTTTTTAATCTACTCATTTGCCGTATATCCTGTCTATCGCATT
TGCAAATTGCCATCGTCCATAACGACAGACCTCGGAGGGCATCGATGACA
TTTTCGCCGACCTGGGGCTGGATGACAGTATACTACCGGACTTGGACAAC
GCAATACTAGAAGATGACACATATATGTTGACAGATACAGAATACGCCGA
TGGCGGTGACTGGGGGTCGGAGAAGAAGCCCCTCAGAGCTCGTGACGATG
AGCGTTCTTCCTTTTCATCCTATTCTACTACTGTCGCCGCAGACGACGCC
AGAGGAGACTTGCCGTTAACAAATCGGAGCAATCCCCCTCCCGAGACCGA
TAGTCACAGTAGCCCCCGAGCCACTACTAAAGCCTCGACAAAGTTCTCAG
ACATGGATTTGTTGTTGCCCATGAGTGGCGGCGGAGACGGAGATACTGAC
TATCACGAATCTGACCAAGATTGGGTGTACGACGGAGAATCTTTGGTCGA
CGGCTACCAAGGCGGTCGGAACAAGCAGCACGCAAATCGAGATGCCGGCA
GTAGAATGGGCCGTTCTGCGGACCGGTCCATGGACCGATCAATCGTGGAC
CAAACAAACGACAGCGGTGTTGGTGGGGCTAGTCTCAACAACCAAAGCAA
CGAGGAGGACGATGGGTCCAACTCGGATTTATTAGTGGACGAGTTATTGT
CGTCGGCGTCTCCTATGCAAGCGGCGCCGTTGTTACCAGCTACAGCATCA
GCAACATCAGCAACAGCAGCAACAGCAGCAGCAGGGAAAGAGGAGGACAT
TTCGTCACCACCATCGCCAAATATAATGTCGGTCGAATCGAGTACTACAG
AGTCTACGGAGATTAGTAGCAGCACTGTTGGGGGGGAGGTCGGTGAGGCG
GCTTCGGCCTCCGTGAGTGCCATGAAGGTGGTGGAGCTGAAGGCTAAGTG
CAAGGAAATGGGCCTGCCGGTTAGCGGGAAGAAGGCTGAGCTGCAGCAAC
GTATTCTCAGTGCGTTTGGGCAAAGCTAATAGCGGCGGCGGCGGCGGTGG
TGGTGGTGGTGATGGCGGTGATGGCGGTAATTGTGGTGGTAGTGATGGTA
GTGAAGAAGAGCATTGCAGCAGTAGTGAGTGTATTGTGCTGTATGGGCGC
GTTTTATGTTATGGTTTTGTTAATGATGCAGTTAGTGCTTGAAAGGTTTG
GGAGCCGTGAAGAAGAAACACATTTTGGGCTCTTTCATCGTGTTTGTAGA
GCTTTTTTTGCCTCCAACGGGGACTGAAGTTTGGCACCCTATTATTTGCG
AGGTACTACGAAGGAAGTAGCTTATAAGAGCTAGCCCCATTTGTTATATT
GTTTCGTCTCGTTTCGCTGTAATACAATTTATTCTTGTTCGTTTCATTTT
GGCCCTTTTTTTTCTGAGGCTGGGCTGCTGTGGCTCTAACGGAGGACTAC
TACAACTACTACTATTACTACTACTACTGGAGCTAGTCAATTCATTCTAT
TAATATTGTTCAACATCGTGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig11385:2815..4735- >mRNA_H-paniculata_contig11385.886.1 ID=mRNA_H-paniculata_contig11385.886.1|Name=mRNA_H-paniculata_contig11385.886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1710bp|location=Sequence derived from alignment at H-paniculata_contig11385:2815..4735- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGACAGATACAGAATACGCCGATGGCGGTGACTGGGGGTCGGAGAA
GAAGCCCCTCAGAGCTCGTGACGATGAGCGTTCTTCCTTTTCATCCTATT
CTACTACTGTCGCCGCAGACGACGCCAGAGGAGACTTGCCGTTAACAAAT
CGGAGCAATCCCCCTCCCGAGACCGATAGTCACAGTAGCCCCCGAGCCAC
TACTAAAGCCTCGACAAAGTTCTCAGACATGGATTTGTTGTTGCCCATGA
GTGGCGGCGGAGACGGAGATACTGACTATCACGAATCTGACCAAGATTGG
GTGTACGACGGAGAATCTTTGGTCGACGGCTACCAAGGCGGTCGGAACAA
GCAGCACGCAAATCGAGATGCCGGCAGTAGAATGGGCCGTTCTGCGGACC
GGTCCATGGACCGATCAATCGTGGACCAAACAAACGACAGCGGTGTTGGT
GGGGCTAGTCTCAACAACCAAAGCAACGAGGAGGACGATGGGTCCAACTC
GGATTTATTAGTGGACGAGTTATTGTCGTCGGCGTCTCCTATGCAAGCGG
CGCCGTTGTTACCAGCTACAGCATCAGCAACATCAGCAACAGCAGCAACA
GCAGCAGCAGGGAAAGAGGAGGACATTTCGTCACCACCATCGCCAAATAT
AATGTCGGTCGAATCGAGTACTACAGAGTCTACGGAGATTAGTAGCAGCA
CTGTTGGGGGGGAGGTCGGTGAGGCGGCTTCGGCCTCCGTGAGTGCCATG
AAGGTGGTGGAGCTGAAGGCTAAGTGCAAGGAAATGGGCCTGCCGGTTAG
CGGGAAGAAGGCTGAGCTGCAGCAACGTATTCTCAGTGCGTTTGGGCAAA
GCTAAATGTTGACAGATACAGAATACGCCGATGGCGGTGACTGGGGGTCG
GAGAAGAAGCCCCTCAGAGCTCGTGACGATGAGCGTTCTTCCTTTTCATC
CTATTCTACTACTGTCGCCGCAGACGACGCCAGAGGAGACTTGCCGTTAA
CAAATCGGAGCAATCCCCCTCCCGAGACCGATAGTCACAGTAGCCCCCGA
GCCACTACTAAAGCCTCGACAAAGTTCTCAGACATGGATTTGTTGTTGCC
CATGAGTGGCGGCGGAGACGGAGATACTGACTATCACGAATCTGACCAAG
ATTGGGTGTACGACGGAGAATCTTTGGTCGACGGCTACCAAGGCGGTCGG
AACAAGCAGCACGCAAATCGAGATGCCGGCAGTAGAATGGGCCGTTCTGC
GGACCGGTCCATGGACCGATCAATCGTGGACCAAACAAACGACAGCGGTG
TTGGTGGGGCTAGTCTCAACAACCAAAGCAACGAGGAGGACGATGGGTCC
AACTCGGATTTATTAGTGGACGAGTTATTGTCGTCGGCGTCTCCTATGCA
AGCGGCGCCGTTGTTACCAGCTACAGCATCAGCAACATCAGCAACAGCAG
CAACAGCAGCAGCAGGGAAAGAGGAGGACATTTCGTCACCACCATCGCCA
AATATAATGTCGGTCGAATCGAGTACTACAGAGTCTACGGAGATTAGTAG
CAGCACTGTTGGGGGGGAGGTCGGTGAGGCGGCTTCGGCCTCCGTGAGTG
CCATGAAGGTGGTGGAGCTGAAGGCTAAGTGCAAGGAAATGGGCCTGCCG
GTTAGCGGGAAGAAGGCTGAGCTGCAGCAACGTATTCTCAGTGCGTTTGG
GCAAAGCTAA back to top
|