mRNA_H-paniculata_contig33.8845.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI) HSP 1 Score: 865 bits (2234), Expect = 9.360e-295 Identity = 517/691 (74.82%), Postives = 577/691 (83.50%), Query Frame = 1
Query: 97 KRQRKDDDASDTRDSSRGENGADVDKRGSPGRERGSKRQKGDGNGSADYGKSGDWYVVHLRGLPWNAGTKDVADFLSPIDVDDDAINVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSSIADAAQALEDVNIKGQSDGDYRGVVRMRGLPWSANESDIRQFFEGLSIDKEGVHITLNREGRPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEVYSMTGAG-RQQDQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAGVKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGALYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQIGAASGTGGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGP--GXGRMGGGHAGVHRPVPAGGYGQYGVRSGGGGXXXXXXXXXXXXXXXXXXXXXGVVGQPVPMGGYAQMAAEGQQQFGQYAGGYRSGADRDRRDDRREF 2160
KRQRKDDD RG N D ERGSKRQKG GNG+ GK + VHLRGLPWNA TK++ DF +P+DV+D I++VHN+RGEAYVK + ESD+E AL+KDR+ +GRRYIEVFRSSI D AL+DV+ KG DG Y+GVVRMRGLPWSANE DIR FF+G++I+K+G+H+TLNR+GRPSGEAYVVFETEE AK ALKRDK+KIGERWIDIFEATKGEVYSMTG G ++ DQ GV+FDT DSAYTGVV+MRGLPFEATK QI+ FF I+VK+SNIFIVTRPDGKASGEAFVLF +EA+AE+AL KDKEKLG+RWIDLFATNKGALYQRVG GVKMAAKPDAEFRGVLRMRG+PF++GVE+IRTFFRGYK+Q+HGVFVVNG DWRPTGE++VLF+SE EAERAFKALDK+KI DRWIELFR+TKGDLYTATVRSTVLGMERGGA+Y +EPMTCVKL+GLPFNVTENNIFSFF GLTVIGSFICKDV+ARPTGEGFVEF +++DCQ AMSRNRESMMDRYVEVFATSKEDVLQQIGA+ GG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX G HRP P GGY YGVR+GG XXXXXXXXXXXXXXXXXXXXX VVG PVPMGGYAQMA G QQFG Y RDRRDDRR+F
Sbjct: 8 KRQRKDDDGV------RGGNEVDT--------ERGSKRQKGGGNGA---GKGEYTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXYXQYXXXXXXXVGGHRPSP-GGYASYGVRAGG-XXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMA--GGQQFGGYH--------RDRRDDRRDF 669
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA) HSP 1 Score: 500 bits (1287), Expect = 1.960e-153 Identity = 275/567 (48.50%), Postives = 346/567 (61.02%), Query Frame = 1
Query: 262 YVVHLRGLPWNAGTKDVADFLSPIDVDDDAINVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSSIADAAQALEDVNIKGQSDGDYRGVVRMRGLPWSANESDIRQFFEGLSIDKEGVHITLNREGRPSGEAYVVFETEEDAKSALK-RDKEKIGERWIDIFEATKGEVYSMTGAGRQQ--DQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVG-AGVKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKI-QDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRST-----------------------------------------------------------------------VLGMERGGALYAK-EPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQI 1731
+ V LRGLPWNA KDV DFL I++ D+ + +VHNTRGEAYVK E+ EA ++ DR +GRRYIEVF +S D +L K +G GV+RMRGLPW+A E DI FF G + GVHI NREGRPSGEAYVVF +E DA A + RDKEK+G RWID+FE+TKGE+Y+ TG ++ +AG D Y GV+KMRGLPF+ATK QI +FF V+DS +FIV DG+ +G+AFV+F E DA+ AL DKEKLG RW+DLF + K A+Y+RVG V+MA++PDA +RGVLRMRG+P+SAG IR FF Y I + G+ V+ G D RP+GEA+V F +E +A+ A L KEKI DR+IELF+ TKGDLYTAT R + G GG A P TC KL+GLP+ VTE +IF FFNGL VIG FICKD RPTGEGFVEFG+++ C ++RNR M++RY+EVFA +K+DVLQ+I
Sbjct: 154 HFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEI 719
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA) HSP 1 Score: 440 bits (1132), Expect = 8.850e-134 Identity = 233/506 (46.05%), Postives = 329/506 (65.02%), Query Frame = 1
Query: 262 YVVHLRGLPWNAGTKDVADFLSP--IDVDDDAINVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSSIADAAQALEDVNIKGQSDGDYRGVVRMRGLPWSANESDIRQFFEGLSIDKEGVHITLNREGRPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEVYSMTGAGRQQDQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAGVKMAA-KPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGG---ALYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQIGA-ASGTGGG 1758
+ V LRGLPWN+G V F S + + +AI+++H GEA+V+F+ ++ ++AL +R +G RY+EVF + +DAA A +GQ+D D+RGVVR+RGLP+SA +I +FF+ + ++GVHI++NR GRP+GEAYVVFETE+D + A+K+DK+++G RW+DI+ +TKG +Y++ GV + + VV+MRGLPF+A K+ I +FF + + I VT G+ SGEAFVLF +E +A RAL KDKEKL ERWIDLF ++K L RVG G A KPDA R +++RG+PFSA V +RTF G I +HGV+++NG D RPTG+ +V+F SE EA RA A + + R +E+ + K DLY T+ + R G Y++ PM C +L+GLPF V E +IF FF+G+ VIG F+CKD+ RPTGE FVEF + Q A+ RNRE + +RYVEVF +K DV+ +I +G GGG
Sbjct: 23 FAVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNVVLADVDEGVDVVFAEEVH--VVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARAA-AYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRIQQFTAGVGGG 523
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA) HSP 1 Score: 423 bits (1087), Expect = 1.090e-130 Identity = 199/360 (55.28%), Postives = 268/360 (74.44%), Query Frame = 1
Query: 664 RPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEVYSMTGAGRQQDQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAGVKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGALYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQIGAAS 1743
RPSG+A+VVF + E A+ A+K+DKE++G RWID+F+ TK E+Y + R A + D+ Y GV++MRGLPFEA+K I++FF + D NIF+V RPDGK SG+AFV+F SE DA+ AL DK+++G RW+DLF TNK LYQRVG V+MA +PD+ ++GV++MRG+P+S GV DIR+F +K++ HGV+++NG D RPTGEAF + ++E +A A LDKE++ +RW+E+F +K +LYTAT S ++GM+ A++ MTCVKL+GLPF V EN IF+FF GL+VIG FIC+D+ R TGEGF EF S+E+CQ AMSRNRE M+DRYVEVFA SK+DVL QIG AS
Sbjct: 1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQIQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIGQAS 360
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK) HSP 1 Score: 425 bits (1092), Expect = 1.170e-127 Identity = 230/508 (45.28%), Postives = 311/508 (61.22%), Query Frame = 1
Query: 262 YVVHLRGLPWNAGTKDVADFLSPIDVDDDAINVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSSIADAAQALEDVNI-KGQSDGDYRGVVRMRGLPWSANESDIRQFFEGLSID--KEGVHITLNREGRPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEVYSMTGAGRQQDQA-------------GVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAGVKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGAD--WRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGALYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQI 1731
Y V LRGLPW+ + ++L V + + GEA + D +AA +DR +G+RY+EVF D + LE + +DGDY GV+R+RGLPWSA+ +D+ +FF GL ++ ++GVH +NREGRPSGEAYVVF + A+ L+RDK+++ RW+D+F ATK EVY+ A + Q A G+ D +Y GV+++RG+PFE TK QI+ FFG + ++FIV RPDG+ +G+AF +F SE DA A A DK+K+G RW+DLF T K LYQR GA V AA+PD E VLR+RG+PF AG DIR FFR Y +HGV+VV D P GE +V F AERA ALD++ + R++ELF T+GDLY T S VL M+ A+Y + MTCVK+ GLP V E+ IF FF G+ VIG FIC+D TGEGF EF +L + Q SRN+ M DR V + +K+DV+++I
Sbjct: 121 YAVWLRGLPWDTSKDAIKEWLGA-GVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENAHKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREI 627
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA) HSP 1 Score: 403 bits (1036), Expect = 5.850e-119 Identity = 229/548 (41.79%), Postives = 321/548 (58.58%), Query Frame = 1
Query: 265 VVHLRGLPWNAGTKDVADFLSPIDVD---DDA--INVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSS---------------------IADAAQALEDVNIKGQS------------DGDYRGVVRMRGLPWSANESDIRQFFEGLSIDKEGVHITLNREGRPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEV---------YSMTGAGRQQDQAGVTFDTGDSAYT-----GVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAG-VKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGA-LYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1731
++ L GLPW DV +FL I V D A I ++ ++ GEA V+ + E AL+ LG+R++++ ++ + DAA A G +GVVRMRGLP+SA E DI FF G + GVH+ + GR SG+AYVVFET +A+ ALK DKEKIGERWID+F ++K E+ Y G G + + G G + V+++RGLPF+ T+ +Q+FF + + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVGA V + AK D + GVL+MRG+PF V D+ T+F Y++ GVF+ GAD RPTGEA+V+FE+ +A A +AL+K+ + +RWI+L+ A+KGD+YT+TV S ++G GG +YA PMTC +L+G+P VTE +F FF GL VIG +IC+D R TGE + EFGSL+DCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 90 ILRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC) HSP 1 Score: 365 bits (936), Expect = 2.070e-107 Identity = 210/521 (40.31%), Postives = 295/521 (56.62%), Query Frame = 1
Query: 265 VVHLRGLPWNAGTKDVADFLSPIDVD---DDA--INVVHNTRGEAYVKFRKESDMEAALRKDRDMLGRRYIEVFRSS---------------------IADAAQAL---------EDVNIKGQSDGDYRGVVRMRGLPWSANESDIRQFFEGLSIDKEGVHITLNREGRPSGEAYVVFETEEDAKSALKRDKEKIGERWIDIFEATKGEVYSMTGAGRQQDQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAG-VKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGA-LYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMM-----DRYVEVFA 1701
++ L GLPW DV +FL I V D A I ++ ++ GEA V+ + E AL+ LG+R++++ ++ + DAA A E ++ +GVVRMRGLP+SA E DI FF G + + GVH+ + GR SG+AYVVFET +A+ ALK DKEKIGERWID+F ++K E+ +FF + + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVGA V + AK D + GVL+MRG+PF V D+ T+F Y++ HGVF+ GAD RPTGEA+V+FE+ +A A +AL+K+ + +RWI+L+ A+KGD+YT+TV S ++G GG +YA PMTC +L+G+P VTE +F FF GL VIG +IC+D R TGE + EFGSL+DCQ AMSRNR+ M DR +EV A
Sbjct: 90 ILRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHA----------------------------------------HFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTA 570
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.570e-86 Identity = 147/295 (49.83%), Postives = 206/295 (69.83%), Query Frame = 1
Query: 868 VVKMRGLPFEATKRQIQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAG-VKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGA-LYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1731
V+++RGLPF+ T+ +Q+FF + + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVGA V + AK D + GVL+MRG+PF V D+ T+F Y++ HGVF+ GAD RPTGEA+V+FE+ +A A +AL+K+ + +RWI+L+ A+KGD+YT+TV S ++G GG +YA PMTC +L+G+P VTE +F FF GL VIG +IC+D R TGE + EFGSL+DCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.440e-82 Identity = 209/623 (33.55%), Postives = 320/623 (51.36%), Query Frame = 1
Query: 250 SGDWYVVHLRGLPWNAGTKDVADFLSPIDVDDDAINVVHNTRGEAYVKFR---KESDMEAALRKDRDMLGRRYIEVFRSSIAD--AAQALEDVNIKGQSDGD------YRGVVRMRGLPWSANESDIRQFFEGLS---IDKEGVHITLNREGRPSGEAYVVFETEEDAKSALK-RDKEKIGERWIDIFEATKGEVYSMTG-AGRQQDQAGVTFDTGDSAYTGVVKMRGLPFEATKRQIQNFFG-----DIDVKDS-NIFIVTRPDGKASGEAFVLFDSEADAERALAKDK---EKLGERWIDLFATNKGALYQRVGAGVKMAAKP----DAEFRGV--------------LRMRGIPFSAGVEDIRTFFRGYKI--QDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGALYA---------------------------------------------------------------------------KEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRNRESMMDRYVEVFATSKEDVLQQIGAASGTGGG 1758
S D VV LRGLP++ + V DF + + +D + ++ N GEA+V+F E+D +A DR +G RYIEV S+ ++ + + L + +G +GD Y GVVRMRGLPW++ E+D+R FF+G S ++GV I + +GR G AY VF++E++A +A+ +D++++G R+I++F+ATKGE+ S A R + V + G++K++GL + AT QI+ FF +++ K+ ++ V PDG++SGEAF +FDS A A +DK ++L RW++L TN+ + V A++P A + G LRMRGIP++ V+D++ FF+GY++ HGV +V+ A R GEA+ FESE EA RA +A+D++K+ R++ELFR ++ ++ V + GG A + P+TC KL+GLPF+ T +IF+FF+GL VIG+ + +D RPTGE F EF S + A R+R M RYVEVF +KE+VL ASG GGG
Sbjct: 27 SPDSLVVRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAF---DRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQRNDATRGPSRPRVPPQLENE---GILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTA--AKMRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVLSYYNRASGDGGG 641
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC) HSP 1 Score: 261 bits (668), Expect = 7.170e-75 Identity = 125/252 (49.60%), Postives = 177/252 (70.24%), Query Frame = 1
Query: 913 IQNFFGDIDVKDSNIFIVTRPDGKASGEAFVLFDSEADAERALAKDKEKLGERWIDLFATNKGALYQRVGAG-VKMAAKPDAEFRGVLRMRGIPFSAGVEDIRTFFRGYKIQDHGVFVVNGADWRPTGEAFVLFESEAEAERAFKALDKEKIKDRWIELFRATKGDLYTATVRSTVLGMERGGA-LYAKEPMTCVKLKGLPFNVTENNIFSFFNGLTVIGSFICKDVLARPTGEGFVEFGSLEDCQSAMSRN 1662
+Q+FF + + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVGA V + AK D + GVL+MRG+PF V D+ T+F Y++ HGVF+ GAD RPTGEA+V+FE+ +A A +AL+K+ + +RWI+L+ A+KGD+YT+TV S ++G GG +YA PMTC +L+G+P VTE +F FF GL VIG +IC+D R TGE + EFGSL+DCQ AMSR+
Sbjct: 3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33.8845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33.8845.1 >prot_H-paniculata_contig33.8845.1 ID=prot_H-paniculata_contig33.8845.1|Name=mRNA_H-paniculata_contig33.8845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=730bp MSDTSHHTNGQDKHKGRESGDGDPDTNAKRQRKDDDASDTRDSSRGENGAback to top mRNA from alignment at H-paniculata_contig33:17840..22919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33.8845.1 ID=mRNA_H-paniculata_contig33.8845.1|Name=mRNA_H-paniculata_contig33.8845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5080bp|location=Sequence derived from alignment at H-paniculata_contig33:17840..22919+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33:17840..22919+ >mRNA_H-paniculata_contig33.8845.1 ID=mRNA_H-paniculata_contig33.8845.1|Name=mRNA_H-paniculata_contig33.8845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4380bp|location=Sequence derived from alignment at H-paniculata_contig33:17840..22919+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |