mRNA_H-paniculata_contig33.8842.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: D7FW47_ECTSI (DNA mismatch repair protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW47_ECTSI) HSP 1 Score: 1717 bits (4446), Expect = 0.000e+0 Identity = 963/1432 (67.25%), Postives = 1100/1432 (76.82%), Query Frame = 3
Query: 270 MKPKKSPG-------KGQGTLFSFFSKKEAPPKTNVTPNKAAXXXXXXXXXXXXXXXXXXXXXXXKKAKIASTSQGSATLNASPRTGTKVKETASRNPNITNKELVGKRVKVYWPDDREWYFGEVVDFCLDDGKHTVHYTDGDKERVNLANEKAVSSSLLQFELAPVPENKVEVVKTRAPKGRARVVEEDDE--ETEWNQDQLEDGGSEEGSSYEDXXXXXXXXXMADSSQSQDSDVPVASRRGKK--PAIKKRAGQMVSSLNVNASRAKRLKKESDVASYAITDTKSPSNAARRPGASAGSPGNAISTRAPLFSTKIVP----PMADLGPSPSAAVLPSRV--VPLPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAE-NGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSD--QTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGMPEVYATTSVESALLRKCVLPMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAKDKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQPGFSRPTFYEGTTIASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERALSHQHAAVAGDEKGRLALAMLALLGGGENESEAVRAGEQLRSIWEEA 4505
MKPKKSP KGQGTLFSFFSK P K T K XXXXXXX S + +T ASP P+ +++L+GKR+KV+W DD WYFG+V+D+ +DGKH +HY DGDKE++ L NEK FELA +V + + P E EWNQD+LED G ++GS+YE+ XXXXXX PV R GKK P+ KKR+GQ S S AKRLKK SD+ASYAITDT SP + AR GA+ + G ++ + + + P P L SP++ P +PLPEGVLDTGRH+HH +WLYK+RVD +RRR +DP YNPRTLYVP FL K+TPAM QWW+FKS+NMDTVLFFKVGKFYELFH DADVGMQELDLIYMKGEKAHSGFPEISYGKFAD LVSKG+RVARVEQVETPDML+ RNAS G++ +DKVVKRELCSILSRGTRTYCFLDDVSS PDGSPRSVNMILSI ETA+ A +E + +A+ DGPP A CEYG+CMVD+TTATFSLGQFADDPARSRLRTLLAQQLPVEI+M+KDNLSETT+HM+KCMAPLASH L KG EFWDA RT++EL RYF N E + K S KG S+ WP ILRAV++GG DGA+ALSALGGA WH RRALIDHDLLSM+RF AYIPSD Q A+P + QE DLPSASSLPGSS QSHMVLDGVSLSNLEVLRNS DGGEKGSLW F+NRCSTAFG+RLLKDWV+KPLL P +IN RLDAV EL+ LSPEADASRALLK+LPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFL VLDGLE AD +PE++ + SVESALLRKCV+ S+GGQFP+M+SAIS+FRNAFDA +K+ G+I+ KPGVD FD K+ R +P + IK I+SEL +L+EQR+ L CS+ YW SAK+KYQ++VPE++ +KN QP DYELKSKKKG RFWTPFI++ L+++A AEQ+LGDAQRDQMR LFAKFDEHR+LWAS VRCL+H+DA+LSLAEVS+QPGFSRP F++G + SFIRLKNARHPCLAQTYQGGEYIPND+ LGA P + DD P APNMLLLTGPNMGGKSTLLRQTCLVAILAQVG FVPADEAH+TP DRIFTRVGASDRILAGQSTFF+ELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAH+LVKSAKCLAMFATHYHSLVE+W HHSEVALGHMSCLV+DN GEQ VTFLYKLAPGPCPKSFGINVARLAQLP+AVISAA+ KSEEFERALS QH+AVAGDEKGRLAL +LALL G++ SE+ +AGE+L+ +W EA
Sbjct: 1 MKPKKSPQGKGKGSPKGQGTLFSFFSK--TPAKEPPTKPKGEEKEKXXXXXXXP-----------------SHATTPSTAGASP-----------EQPSKDSEKLLGKRIKVFWRDDNNWYFGKVIDY-YEDGKHLIHYDDGDKEKLVLKNEK--------FELA----REVNESEPKPPXXXXXXXXXXXXXXEAEWNQDELEDSGGDDGSAYENEGNXXXXXXXXX----XXXXAPVTPR-GKKSTPSKKKRSGQAAPS-GPGGSGAKRLKKASDLASYAITDTVSPGSGAR--GATGNASGRSLQSPVSTPTVRSSPHSSRPFVGLS-SPASPPTPKAPAGIPLPEGVLDTGRHSHHSFDWLYKNRVDANRRRPDDPLYNPRTLYVPPSFLSKETPAMVQWWKFKSQNMDTVLFFKVGKFYELFHVDADVGMQELDLIYMKGEKAHSGFPEISYGKFADGLVSKGYRVARVEQVETPDMLKARNASVGRNGTKDKVVKRELCSILSRGTRTYCFLDDVSSTPDGSPRSVNMILSIKETAVDALSEFDPGSPGSADADGPPAAVCEYGVCMVDATTATFSLGQFADDPARSRLRTLLAQQLPVEIVMEKDNLSETTLHMIKCMAPLASHMTLHKGTEFWDASRTVQELKNRRYFRN-ESNAKEKSSAGDGKG-SNVEDWPPILRAVVEGGKDGALALSALGGATWHTRRALIDHDLLSMRRFVAYIPSDMKQPDSNAAPST-------PNDSQEAGDLPSASSLPGSSAQTPSQSHMVLDGVSLSNLEVLRNSSDGGEKGSLWAFVNRCSTAFGRRLLKDWVLKPLLFPTHINGRLDAVSELAGDLSPEADASRALLKKLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLSVLDGLEKADRLPEIFKSASVESALLRKCVISKSEGGQFPDMSSAISYFRNAFDAGTSKKKGLIELKPGVDEDFD--KIKPRGRYFVWPVLAQID--IKEIKSELDGHLREQRKRLGCSDAEYWHSAKEKYQIQVPERYFSKNRQPSDYELKSKKKGALRFWTPFIKDHLEQLAAAEQRLGDAQRDQMRGLFAKFDEHRELWASTVRCLSHLDAVLSLAEVSAQPGFSRPRFHDGASTPSFIRLKNARHPCLAQTYQGGEYIPNDATLGAAPAGISDDAPAAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGCFVPADEAHLTPLDRIFTRVGASDRILAGQSTFFLELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHYLVKSAKCLAMFATHYHSLVEDWGHHSEVALGHMSCLVEDNGGEQRVTFLYKLAPGPCPKSFGINVARLAQLPDAVISAAQLKSEEFERALSLQHSAVAGDEKGRLALKLLALLSDGDD-SESAQAGEELQKMWNEA 1366
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: W7TDU6_9STRA (DNA mismatch repair protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU6_9STRA) HSP 1 Score: 974 bits (2518), Expect = 0.000e+0 Identity = 649/1465 (44.30%), Postives = 842/1465 (57.47%), Query Frame = 3
Query: 279 KKSPGKGQGTLFSFFSKKEAPPKTNVTPNKAAXXXXXXXXXXXXXXXXXXXXXXXKKAKIASTSQGSATLNASPRT-----GTKVKETASRNPNITN--KELVGKRVKVYWPDDREWYFGEVVDFCLD-DGKHTVHYTDGDKERVNLANEKAVSSSLLQFELAPVPENKVEVVKTRAPKGRARVVEEDDEETEWNQDQLEDGGSEEGSSYEDXXXXXXXXXMA----DSSQSQDSDVPVASRRGKKPAIKKRAGQMVSSLNVNASRAKRLKKESDVASYAI---TDTKSPSNAARRPGASAGSPGNAI------STRAPLFSTKIVPPMA----DLGPSPSAAVLPSR----------VVPL----PEGVLDTGRHTHHGLNWLYKD-RVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVS------SAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGN-----------SDTTHWPSILRAVIDGGTDGA-MALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTY-GAASP--------------------LVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQS----HMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGMPEVY--ATTSVESALLRKCVLPMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSA-KDKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQPGFSRPTFY-------------EGTTIASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERALSHQ 4376
K+ G+ Q +LFSFF KKE + TP XXXXXXXX + KI S + + + +P T G +ASR P + KE+VGKRVKV+WP+D E+Y G + F DGKH + Y DG++ERV LA E + E P E +E + +A A V ++D T N+ + ++ S ED + S S + R + PA+ G+ + NA R + + A + D+ +PS A P A+ GS + I ++ + +F+T + LG S +V R VV P+GVL+ G+HTHHGL WL+ R D R PD++ RTL VP FL K+TPAMRQWWEFK++++DT+LFFKVGKFYE+FH DADV ++ELDLIYMKGEKAHSGFPEI+YGKFA +LV KG+RVAR+EQVETP+ ++ N G R VV RELCS+LSRGTRT+C+LD+ + S P G+P ++++I + + A A D+ YG+CMVD TTATF LGQF D P R RL+T+L+Q P EIL+++ + +++ AP A +LR G EFWDA + +EL KG YF GS K T + WP L+ V D A +AL ALGG IW +RR+LID DLLSMQ F Y P D AA+P L G L +E+ G G ++S ++VLDG +L+NLE+ RNS DG KG+LW +N C TAFG R L++ + +P P INARLDAV EL + LSPEAD R LLK++PD+ER L+R H++ S HR+ +HP+SRAIMYE KY+ RK+NDFL L+GL+ A + + + S LL++ + FP++ + FF AFD A AKR+GVI PKPG D +D AK E I+ + +E++ YL+EQR+ L EI YWG+ KD++QLEVPE L + GQP DYE KS KKG +RF TP I+E L+E+ DAE L +AQR +MRRLF FD R LW +AV LA +D LL+LAEVSS + RPT G A F+ +K RHPCL G+YIPND LG G+ ++LL+GPNMGGKSTLLRQTC++AILAQ+G +VPA+E +TP DRIFTRVGASDRIL GQSTFFVEL+ETANIL HATSRSLVILDELGRGTSTFDGTAIAHAV FLV+ +C A+FATHYHSLVE+W H V GHM+CLV+ +E EQ VTFLY+LA GP PKS+G+NVARLA LP+ VI A+ KSE FE ++ Q
Sbjct: 15 KEIDGRKQASLFSFFQKKEK----SDTP-----FPXXXXXXXXASKSVTPLAKNMRCTKINSITSDMSGITTTPSTSIVNKGGSADGSASRVPAASTYGKEVVGKRVKVWWPEDEEYYGGTITAFSGGGDGKHAILYDDGEEERVYLARE---TIQWEDSECLPSAETSIEQKRGQA----AHAVTQEDSVT--NEVARKRRVVQDESESEDEINFSSATPVGVAPYPSFPSSLKEFSGKRARLESPALSNGEGE-----DNNAESKGRRDRSARTAFAGLGLGNDSFAPSEPASAPRANEGSSDSQIRGTPASASNSTVFNTPLSASSGRARLSLGSSGGGSVKKGRASWVEEEEDEVVAASHDRPDGVLEYGKHTHHGLKWLWDPHRRDAQGRSPQHPDFDRRTLQVPAAFLAKETPAMRQWWEFKAQHLDTILFFKVGKFYEIFHMDADVAVRELDLIYMKGEKAHSGFPEIAYGKFAPLLVEKGYRVARIEQVETPEAMKEHNRRCGPGAKRT-VVARELCSVLSRGTRTFCYLDEATFEEGAGSDPTGAP----LLIAIKQEKVEAEAGREGEDEG---------RVAYGVCMVDPTTATFHLGQFEDGPQRWRLKTMLSQFSPAEILLERGGACASLEQVVRLCAPGALVEMLRPGAEFWDADKAFKELKKGDYFPR---GSKKKGKTXXXXXXXXXXXEGEGLMNGCGRWPLTLQVVAAARRDKARLALCALGGVIWQLRRSLIDKDLLSMQSFYPYAPPDVVLRDAAAPMPEETEGLEPGSEEEDIFFCLGGDEALLFDMKKREEGLQRETLGESGRQGGVERKSDHGRYLVLDGTALTNLEIFRNSYDGTGKGTLWEHLNHCRTAFGARKLREMLCRPSQRPGVINARLDAVTELKDELSPEADEIRRLLKKMPDLERQLARHHALGSVHRAEDHPDSRAIMYELDKYNGRKINDFLSTLEGLKTASKVRTILFDSMDRCHSTLLQRLTMT------FPDLGPRLDFFGEAFDPAQAKREGVITPKPGYDDEYDSAK-----------------ERIEAVMAEIEIYLKEQRQRLGSQEIKYWGNKDKDRFQLEVPEAIL-RRGQPADYEAKSSKKGCRRFHTPRIRELLEELGDAEASLSEAQRQEMRRLFENFDHDRQLWTTAVNSLALLDVLLALAEVSSGANYCRPTLVPYHADSTEEAGGSNGAIPAPFLSIKGGRHPCLETRAALGDYIPNDIELGVATGQRE-------RVMLLSGPNMGGKSTLLRQTCVLAILAQLGCYVPAEECSLTPVDRIFTRVGASDRILQGQSTFFVELAETANILQHATSRSLVILDELGRGTSTFDGTAIAHAVVSFLVQRLQCRALFATHYHSLVEDWRGHVGVCFGHMACLVEPDEAEQKVTFLYRLADGPSPKSYGLNVARLAHLPSEVIDLAREKSETFEAFMTQQ 1408
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A835YGI1_9STRA (DNA mismatch repair protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGI1_9STRA) HSP 1 Score: 936 bits (2419), Expect = 7.370e-308 Identity = 625/1438 (43.46%), Postives = 782/1438 (54.38%), Query Frame = 3
Query: 1044 KRLKKESDVASYAITDTKSPSNAARR-PGASAGSPGNA--ISTRAPLF----------STKIVPP-----MADLGPSPSAAVLPSRVVPLPEGVLDTGRHTHHGLNWLYK-DRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAE-------NGDV----DDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVE--------ILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLL--------------------------------------------------SMQ-------RFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQ-QSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGF------------------------------------INRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGMPEVYATTSVE---SALLRKCVLPM---------------------SDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAKDKYQLEVPEKHLAKNGQPPDYELKSKKK------------------GWKRFWTPFIQEKLQEMADAEQQLGDAQR-----DQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQPGFSRPTFYEGTTIASFIRLKNARHPCLAQTYQ---------------------------------------------------------GGEYIPNDSALGATPGELM-DDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAH-----------------------------------------FLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERALSHQ---HAAVAGDEKGR---LALAMLALLGGGENESEAVRAGEQLRSIWEEA 4505
KRL+K +YAIT+TK+PS AA++ P A A + +A + +AP S P +A G S A P + LPEGV++TG H HH +++L + +R+D +RR+ + P+Y+PRTLYVP GF K+T AM+QWW+ KS+NMDTVLFFKVGKFYELFH DAD GEKAHSGFPEISYGKFAD LV +G+RVARVEQ ETPDM++ RN K K+ +DKVVKRELCS+LSRGTRTYCFLD +S APDG+P + +L+I E + ++ +GD D+A D P A CEYGIC+VD+ TATF LGQFAD AR RLRTLLAQ P E ++ +++LSETT H++KCM P A L G ++W +T +E+ YF+ D KG + HWP +LRAV+ GG D + L+A G A+ H+RR+LIDHDL SM RF AYIP D+T G D Q Q +MVLDGV+L+NL+V RNS DG E+G+LW +NRCST FG+RLL++W+ +PLL I RLDAV +L ALSPEADA R LK LPD+ERLLSRVHSMAS HR++ HP+SRA+MYE +Y RK+ DF VLDGLEAA +P + + + LLR+ +L +DGG FP+M AI++FR AFDA AK+ IKP+ GVD +D AK +D I IE EL+ +LQ+ R+ LRCS + +AK+++Q+E+PE P +++L+SK+K G++RFWTP+I KL E+A+A+ L D QR D MRRLFAKFD HRDLWA AV CLAHVDALL+LA VS PG+ RP F EG F+RL+ ARHPC+AQTY G E+IPND+ALG P D+ A +L+L+GPNMGGKSTLLRQTCLVAI+AQ A +TP DRIFTRVGASDRILAGQSTFFVELSETA ILHHAT RSLVILDELGRGTSTFDGTAIAHAV FLV A+CL++FATHYHSLVE+W H +V HM C+VD Q VTFLY L G CPKSFGINVARLA+LP+ V+ A+RKS FE AL Q H A AG +A +LALL E S+ AGE ++++W +A
Sbjct: 329 KRLRKGG---AYAITETKTPSAAAKKKPAAKAQATASAPRANGKAPXXXXXXXXXXGKSAAAATPDAAAAVAVEGGDASPAGRPR--IELPEGVINTGGHLHHKMDFLKEGNRMDANRRKPDHPEYSPRTLYVPPGFKTKETAAMQQWWDLKSQNMDTVLFFKVGKFYELFHMDAD------------GEKAHSGFPEISYGKFADTLVERGYRVARVEQTETPDMMKERN--KTKAGPKDKVVKRELCSVLSRGTRTYCFLDSLSRAPDGAPGTAAPLLAIVERQLPQTSTPPAPMEVDGDEAAAEDEAGAADAAPAAVCEYGICLVDAATATFRLGQFADTAARPRLRTLLAQAPPAEASLVARANLIFARNSLSETTTHLLKCMVPNALLTQLIPGADYWGPEKTRKEITAAGYFKPNAD----------TKGGEE--HWPELLRAVVAGGADAELCLAAAGAAVAHLRRSLIDHDLAXXXXXXXXXXXXXXXXXXXXXXXVRDAPLTARLRSVKTATVPCPFTWLTSSMSDARDPLCRFEAYIPPDETLGDDRG------------DXXXXXXXXXXXXXXXXXXXXQGQKNMVLDGVALANLDVFRNSYDGSERGTLWSLPHAPPHTRSAAAAXXAAGPAAARSXXXXXXXXXXXLVNRCSTPFGRRLLREWLCRPLLSADAIGLRLDAVEDLITALSPEADALRRKLKGLPDIERLLSRVHSMASLHRATRHPDSRAVMYELDRYGRRKIGDFCYVLDGLEAAAAVPALLREGGGDGPSAELLRRYLLLEXXXXXXXXXVGAAAYSSRSIEADGGSFPDMADAIAWFRGAFDAEEAKKARTIKPRAGVDEAYDAAK-------------RD----IARIEGELEAHLQQIRKELRCSTAKWVHAAKERFQVELPENMAV----PREFDLRSKRKXXXXXXXXXXXXXXXXXKGFRRFWTPYIARKLGELAEADAALEDGQRISVKNDAMRRLFAKFDAHRDLWAQAVTCLAHVDALLALAAVSGSPGYCRPAFREGAE--PFMRLQQARHPCIAQTYXXXXXXXXXXFQQAGRPSVAQTFQGAVGRCICNAARRPVHAADREAAAHMCDGIAPPVGVEFIPNDTALGPDPSAAAAGDSSEAHRLLMLSGPNMGGKSTLLRQTCLVAIMAQ--------SAELTPVDRIFTRVGASDRILAGQSTFFVELSETAAILHHATPRSLVILDELGRGTSTFDGTAIAHAVVSXXXXXXXXXXXXXXXXXXXXXXXVSGTSAFDGTAMPWSGEAFLVNKARCLSLFATHYHSLVEDWGTHPQVKNAHMGCIVDGEGEAQRVTFLYTLTDGACPKSFGINVARLARLPHQVLVTAERKSHAFEAALQQQQAQHRASAGSADAAASDVASKLLALLEAAE--SDPATAGESIKALWVQA 1690
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: H3G5M3_PHYRM (DNA mismatch repair protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5M3_PHYRM) HSP 1 Score: 881 bits (2276), Expect = 8.170e-295 Identity = 506/1054 (48.01%), Postives = 674/1054 (63.95%), Query Frame = 3
Query: 1257 LPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGM-----PEVYATTS-VESALLRKC-----VLPMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK--DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTI---ASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL 4367
LP V G H H L WL++ R D + + PDY+PRT+ VP+ FL K+TPAM QWWE K+ENMDTVLFFKVGKFYELFH DADVG +EL+LIYMKG+KAHSGFPEI+Y K + LV KG+RVARVEQ ETPDML+IRN+++ K + KVV+RE+CS+LS GT T FLD AP S V+ L + A S + +G+C+ D+ T F L +F D R RL+TL AQ VEI+ ++ N+S+ T ++K AP A + LR G EFWDA +TI+E+ + YF K D ++ + + V +DG +A+SALGG IWH+RR++ID +LLS+ F Y PSD+ E D SL ++ +QQ ++VLD ++ NLEVL NS +G GSL +++ T+FG+R+ ++WV+KPL I RLDAV EL N+ + R L++LPD+ERLLSR+H++ S HRS EHP+SRAIMYE Y+IRK+ DFL VLDG +AA + P + +TS + +LL++ V P + G FP++T + FF+ +FD A A++ GVI P+ GVD FD+A I +E+EL EYLQEQ+ +LRC +I YW K D+YQLEVPE L+K QP ++ELKS++KG+KRF TP I+ L+ +A AE +A +DQ RR+F KFDE W AV+CLA +D L+SLA +SSQ G+++P T F+ ++ HPC+A TY G++IPND+ LG G+ M+LL+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST +VEL+ETA IL+HATS SLVILDELGRGTSTFDGTAIA++V L+ +C AMFATHYHSLVEE++ + +V+LGHM C+VD E ++ VTFLYKL G CPKS+GINVA LA+LP+ VI A +KSE+FER+L
Sbjct: 126 LPSSVAGAGNHIHDSLPWLHEQRRDINGNTPDSPDYDPRTVKVPQEFLKKETPAMVQWWEVKAENMDTVLFFKVGKFYELFHMDADVGFKELNLIYMKGDKAHSGFPEIAYSKMSAQLVEKGYRVARVEQTETPDMLKIRNSNQAK---KSKVVRREVCSLLSIGTNTISFLD----APISSQNRVSKYLLALKEAFDPSRKT----------------VRFGVCLADAATGAFQLSEFDDTEQRDRLKTLFAQFHVVEIITERFNISDDTKMVLKHAAPAAIRSSLRVGKEFWDASKTIDEIERAGYF-------------KEHGWPEDVLYFLEMDKVVK---SDGQLAISALGGCIWHLRRSIIDQELLSLCNFRRYKPSDE---------------------ETRDARVNKSLSAATAELNQQ-YVVLDSQTIQNLEVLTNSFNGTRSGSLIDIMDKTVTSFGRRMFQEWVLKPLCKIGDIQERLDAVEELGNSGDLMMEI-REFLRKLPDLERLLSRIHALGSSHRSKEHPDSRAIMYESQTYNIRKIRDFLAVLDGFDAAMNLTLELGPRLSQSTSPILQSLLKRYQVEDGVKPDIEHGHFPDLTEKLEFFKRSFDQAAAQKSGVIVPQDGVDSEFDDACAE-----------------IAQVEAELNEYLQEQQNALRCRQISYWIPKKKEDRYQLEVPESVLSK--QPKEFELKSRRKGYKRFHTPTIRSLLKRLATAEDHKDEALKDQTRRIFHKFDEDYKYWMKAVQCLAVIDCLVSLALLSSQSEGYTKPEVVAAITANGGTPFVDIEEGVHPCVAATYGSGDFIPNDARLGIE-GKGQ--------MVLLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLYVELAETATILNHATSHSLVILDELGRGTSTFDGTAIAYSVVEHLLSDIRCRAMFATHYHSLVEEYAGNDKVSLGHMGCIVDQ-ENDRKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIECAAKKSEQFERSL 1088
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: D0N012_PHYIT (DNA mismatch repair protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0N012_PHYIT) HSP 1 Score: 881 bits (2277), Expect = 8.340e-293 Identity = 526/1135 (46.34%), Postives = 705/1135 (62.11%), Query Frame = 3
Query: 1170 PLFSTKIVPPMADLGPSPSAAVLPSRVVPLPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGG----TDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGM-----PEVYATTS-VESALLRKCVL-----PMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTIAS---FIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL-SHQHAAVAGDEKGRLALAMLALLGGGENESEAVRAG-EQLRSIWEEAQ 4508
P STK P+AD GP+ LP V G H H L WL+++R D + + PDY+PRTL +P F+ K+TPAM QWWE KS NMDTVLFFKVGKFYELFH DAD+G +EL+LIYMKG+KAHSGFPEI+Y K + LV+KG+RVARVEQ ETPDML++RN+S K KVV+RE+CS+LS GT T FLD AP S V+ L + A A+ ++ +G+CMVD +T F L +F D R RL+T+ AQ VEI+ ++ N+S+ T ++K AP A + LR G EFWDA +TI+E+ + YF+ E G WP + ++ ++G +A+SALGG IWH+RR LIDH+LLS+ F Y PSD+ A A + KA+L Q ++VLD ++ NLEVL NS +G G+L +++ T+FG+R+ ++WV+KPL I RLDAV EL + + R L++LPD+ERLLSR+H++ S +RS EHP+SRAIMYE Y++RK+ DFL VL+G + A + P + + S + +LL++ + P + G FP++T + FF+ +FD A AK+ GVI P+ G+DP FD A I +E+EL +YL EQR +LRC +I YWG K D+YQLEVPE L+K QP +YELKS+KKG+KRF TP I+ L+ +A AE+Q +A +DQ RR+F KFDE W AV+CLA +D L+SL +SSQ G+++P + FI ++ HPC+A TY G++IPND+ LG G+ M+LL+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST FVEL+ETA IL+HATS SLVILDELGRGTSTFDGTAIA++V L+ +C MFATHYHSLVEE+ V+LGHM C+VD E E+ VTFLYKL G CPKS+GINVA LA+LP+ VI A +KSE+FER+L ++ H + E RLA + +L GE AG ++L+ +WE+A+
Sbjct: 223 PTSSTKKSAPLAD-GPA------------LPSSVAGAGNHIHDSLPWLHEERRDINGNTPDSPDYDPRTLKIPPEFVKKETPAMVQWWEVKSRNMDTVLFFKVGKFYELFHMDADIGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVAKGYRVARVEQTETPDMLKVRNSSLAKKA---KVVRREVCSLLSIGTNTVSFLD----APISSQDQVSKYLLALKEAFDATQKS----------------VRFGVCMVDCSTGAFQLSEFDDTEQRDRLKTMFAQFHVVEIVTERFNISDDTKMVLKHAAPGAIRSSLRVGKEFWDASKTIDEIERAGYFK--EHG------------------WPGAVLYFLEMDKVVKSEGQLAISALGGCIWHLRRCLIDHELLSLCNFKRYKPSDEEAREARANREA-------MSAAKAEL--------------NQQYVVLDSQTIQNLEVLCNSFNGSRSGALIDIMDKTVTSFGRRMFQEWVLKPLCKIGDIQERLDAVEELGTSGDLMMEI-REFLRKLPDLERLLSRIHALGSAYRSKEHPDSRAIMYESQIYNVRKIKDFLAVLNGFDEAMNLTLELGPRLSQSNSPILQSLLKRYAIEDGVQPDVNRGHFPDLTEKLEFFKRSFDQASAKKSGVIVPQAGIDPEFDAACAE-----------------IAEVEAELADYLSEQRSALRCRQISYWGKKKEDRYQLEVPESALSK--QPKEYELKSRKKGYKRFHTPTIRALLKRLATAEEQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLLSSQSEGYTKPEVVAASAANDGKPFIDIEEGVHPCVAATYGSGDFIPNDAQLGIQ-GKGQ--------MVLLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLFVELAETATILNHATSHSLVILDELGRGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVEDDRVSLGHMGCIVDP-ENERKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIECAAKKSEQFERSLQANSHTEL---ENIRLAQKVREVLAEGE-------AGIDKLKQLWEQAR 1240
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A662WMB9_9STRA (DNA mismatch repair protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMB9_9STRA) HSP 1 Score: 882 bits (2279), Expect = 1.990e-292 Identity = 526/1094 (48.08%), Postives = 687/1094 (62.80%), Query Frame = 3
Query: 1281 GRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGMP-EVYATTSVESALLRKCVLP---MSDG-------GQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTI---ASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL-SHQHAAVAGDEKGRLALAMLALLGGGENESEAVRAG-EQLRSIWEEAQ 4508
G H H L+WL++ R D + N PD++PRT+ VP FL K+TPAM QWWE K NMDTVLFFKVGKFYELFH DADVG +EL+LIYMKG+KAHSGFPEI+Y K + LV+KG+RVARVEQ ETPDML+ RN+S K + KVV+RE+CS+LS GT T FLD AP S V+ L + + S + GI MVD T F + +F D R RL+TL AQ VEI+ ++ N+S+ T ++K AP A + LR G+EFWDA RTI+E+ + YF E G D H+ I + V DG +A+SALGG IWH+RR++ID +L+S+ F Y PSD+ A S++ KA+L Q ++VLD ++ NLEVL NS +G GSL +++ T+FG+R+ ++WV+KPL IN RLDAV EL N + R L+RLPD+ERLLSR+H++ S HRS EHP+SRAIMYE Y+IRK+ DFL VL+G +AA + E+ S S+ + + +L + DG G FP++T + FF+ +FD A A++ GVI P+ GVDP FD A I +E+EL EYL EQR +LRC +I YWG K D+YQLEVPE L+K QP +YELKS+KKG+KRF TP I++ L+ +A AE +A +DQ RR+F KFDE W AV+CLA +D L+SL +SSQ G+++P +T FI +K HPC+A TY G++IPND+ LG G+ M+LL+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST FVEL+ETA IL+HAT SLVILDELGRGTSTFDGTAIA++V L+ +C MFATHYHSLVEE++ + +V+LGHM C+VD E ++ VTFLYKLA G CPKS+GINVA LA+LP VI A +KSE+FER+L ++ HA + E R A + L GE AG + L+ IWEEA+
Sbjct: 296 GNHIHDSLSWLHEKRRDINGNAPNSPDFDPRTVKVPAEFLKKETPAMVQWWEVKCRNMDTVLFFKVGKFYELFHMDADVGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVTKGYRVARVEQTETPDMLKERNSSAAK---KSKVVRREVCSLLSIGTNTISFLD----APISSQEQVSKQLLAVKEMVDPSQKT----------------VRIGISMVDCATGAFQVAEFDDTEQRDRLKTLFAQFHIVEIVTERFNISDDTKMVLKHAAPAAIRSSLRVGNEFWDASRTIDEIQRAGYF--NEHGWPE-----------DVLHYLEIDKTVK---ADGQLAISALGGCIWHLRRSMIDQELMSLSNFRRYKPSDEEAREAR------AKNQSALSSAKAEL--------------NQQYVVLDSQTIQNLEVLANSFNGARSGSLIDIMDKTVTSFGRRMFQEWVLKPLCKVGDINERLDAVEELGNNDELMMEI-RDFLRRLPDLERLLSRIHALGSTHRSKEHPDSRAIMYESQTYNIRKIRDFLSVLNGFDAAMNLTMELGPRLSNSSSPILRSLLKTYRVQDGVQPDVTHGHFPDLTEKLEFFKRSFDQAGAQKSGVIVPQEGVDPEFDGACAE-----------------ISQVEAELAEYLSEQRTNLRCRQISYWGKKKEDRYQLEVPESALSK--QPKEYELKSRKKGYKRFHTPTIRDLLKRLAAAEDLKDEALKDQTRRVFHKFDEDYKYWMKAVQCLAVLDCLISLGLLSSQSEGYTKPEVVAASTANGGTPFIEIKEGVHPCVAATYSSGDFIPNDAQLGID-GKGQ--------MVLLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLFVELAETATILNHATGHSLVILDELGRGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYADNDKVSLGHMGCIVDP-ENDRKVTFLYKLADGMCPKSYGINVAMLAKLPEEVIECAAKKSEQFERSLQANSHAEL---ENMRFARKVEEGLAEGE-------AGFDTLKQIWEEAR 1290
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A8K1CDA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDA9_PYTOL) HSP 1 Score: 877 bits (2265), Expect = 9.740e-291 Identity = 529/1140 (46.40%), Postives = 710/1140 (62.28%), Query Frame = 3
Query: 1140 SPGNAISTRAPLFSTKIVPPMADLGPSPSAAVLPSRVVPLPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLD-DVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGMPEVYAT------TSVESALLRKCVLPMSDG---GQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRP---TFYEGTTIASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL-SHQHAAVAGDEKGRLALAMLALLGGGENESEAVRAGEQLRSIWEEAQK 4511
SPG + P STK P SPSA P GV G H H L +L R D + + P+Y+PRTLYVP FL K+TPAM QWW+ K++NMDTVLFFKVGKFYELFH DADVG +EL+LIYMKGEKAHSGFPEI+Y K + LV KG+RVARVEQ ETPDML+ RN+ KS + KVV+RE+CS+LS GT T FLD +SS+ + R +L++ E VD A+ + YG+ +VD T F L +F D R RL+TL AQ VEI+ ++ + T ++K AP A + L G EFWDA RTI+E+ + YF E G +S + ++ + V + D + +SALGG +WH+RR++ID +L+S+ F Y PSD+ A A+V A + ++Q+ ++VLD ++ NLE+L N+ +G GSL +++ TAFGKRL ++WV+KPL IN RLDAV EL + R L+RLPDVERLLSR+H++ S HRS EHP+SRAIMYE ++Y+IRK+ DFL VLDG +AA + + + T + +L+K L + G FP++ + FF+ +FD A + G I P+ GVDP +D+A S I I+SEL +YL+EQR L+C +I YWG+ K D++QLE+PE L ++ QP +YELKS+KKG+KRF +P I++ L +++ AE + A +DQMRR+F KFDE W AV+CLA++D LL LA VSSQ GF RP + + + A FI ++ HPC+A T+ G +IPND+ LG++ G+ M+LL+GPNMGGKSTLLRQTC++A++AQ+G FVPA + M+P DR+FTR+GASDRILAGQST +VEL+ETA IL+HA+ SLVILDELGRGTSTFDGTAIA+AV FL++ KC A+FATHYHSLVEE++ V+LGHM CLVD N E+ VTFLYKL G CPKS+GINVA LA+LP+ VI A +KSE+FE++L ++ H + E R+ ++ L SEAV ++LR +WEEAQK
Sbjct: 228 SPGARKGSVTPPSSTKKSP-----AASPSATEAVEGSGPNASGVYGAGCHIHDSLPFLNAKRRDVNGNAPDSPEYDPRTLYVPPDFLKKETPAMAQWWQVKAQNMDTVLFFKVGKFYELFHMDADVGFKELNLIYMKGEKAHSGFPEIAYAKMSSQLVEKGYRVARVEQTETPDMLKERNS---KSSTKAKVVRREMCSLLSPGTNTVSFLDAPISSSQE---RISKYLLALKEQ----------VDPQAK-------SIRYGVVLVDCATGAFHLSEFDDTEQRDRLKTLFAQFFVVEIVNERHGICADTRQVIKHAAPNAIRSELIVGKEFWDASRTIDEITRAGYF--NEHGWPEDIS-----------QFLNMDKTVPE---DAQLVISALGGCVWHLRRSIIDQELMSLCNFRRYKPSDEE--AKEQQSAAAVAAEAELNQQ---------------------YVVLDSQTIQNLEILTNNYNGTRAGSLIDILDKTVTAFGKRLFQEWVLKPLCKVADINERLDAVEELGQNQDAVMEV-RDFLRRLPDVERLLSRIHALGSTHRSQEHPDSRAIMYESSQYNIRKIRDFLSVLDGFDAAMDLLQQFGPRFSQFKTPILRTILKKHNLSSNTTDARGHFPDLRDKLDFFKRSFDRQAAAKSGTIVPQDGVDPEYDDACAS-----------------ITRIQSELDDYLREQRTRLKCKQISYWGTKKEDRFQLEIPESAL-QSSQPKEYELKSRKKGYKRFHSPTIRDLLSQLSAAEDRKEVALKDQMRRIFHKFDEDYKYWMKAVQCLANLDCLLGLALVSSQSEGFIRPEVVSAVQANSGAPFIEIEEGVHPCVASTFDSGGFIPNDTTLGSS-GQG--------RMVLLSGPNMGGKSTLLRQTCVIALMAQIGCFVPASKCRMSPVDRVFTRIGASDRILAGQSTLYVELAETATILNHASRHSLVILDELGRGTSTFDGTAIAYAVVDFLLREVKCRALFATHYHSLVEEYTQDERVSLGHMGCLVDPNN-ERKVTFLYKLEEGMCPKSYGINVAMLAKLPDEVIDVAAKKSEQFEKSLQANSHVEL---EALRITRSVEECLA-----SEAVDV-KRLRDLWEEAQK 1262
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A6A3K7V7_9STRA (DNA mismatch repair protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K7V7_9STRA) HSP 1 Score: 877 bits (2266), Expect = 1.070e-290 Identity = 527/1131 (46.60%), Postives = 701/1131 (61.98%), Query Frame = 3
Query: 1170 PLFSTKIVPPMADLGPSPSAAVLPSRVVPLPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGM-----PEVYATTS-VESALLRKC-----VLPMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTI---ASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL-SHQHAAVAGDEKGRLALAMLALLGGGENESEAVRAG-EQLRSIWEEAQ 4508
P+ ++K P+AD GP LP V G H H L WL++ R D + + PDY+PRT+ VP FL K+TPAM QWWE K+ NMDTVLFFKVGKFYELFH DADVG +EL LIYMKG+KAHSGFPEI+Y K + LV+KG+RV RVEQ ETP+ML++RN+S K KVV+RE+CS+LS GT T FLD S+ D + +L++ ET +A +G+CMVD +T F L +F D R RL+TL AQ VEI+ ++ N+S+ T ++K AP A + LR G EFWDA +TI+E+ + YF K D H+ + + V +G +A+SALGG IWH+RR++ID +LLS+ F Y PSD+ A A + KA+L Q ++VLD ++ NLEVL NS +G GSL +++ T+FG R+ ++WV+KPL I R+DAV EL N+ + R L++LPD+ER+LSR+H++ S HRS+EHP+SRAIMYE Y+IRK+ DFL VL+G + A + P + +TS + +LL++ V+P G FP++T + FF+ +FD A AK+ GVI P+ GVDP FD A I IE+EL EYL+EQR +LRC I YWG K D+YQLEVPE L+K QP +YELKS+KKG+KRF TP I+ L+ +A AE Q +A +DQ RR+F KFDE W AV+CLA +D L+SL +SSQ G+++P + FI ++ HPC+A TY G++IPND+ LG G+ M+LL+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST +VEL+ETA IL+HATS SLVILDELGRGTSTFDGTAIA++V L+ +C MFATHYHSLVEE+ +V+LGHM C+VD E ++ VTFLYKL G CPKS+GINVA LA+LP+ VI A +KSE+FER+L ++ H + E RLA + L GE AG ++L+ +WEEA+
Sbjct: 258 PMSNSKKSAPLAD-GPD------------LPSSVAGAGNHIHDSLPWLHEKRRDINGNTPDSPDYDPRTVKVPPEFLKKETPAMVQWWEVKAHNMDTVLFFKVGKFYELFHMDADVGFKELGLIYMKGDKAHSGFPEIAYSKMSSQLVAKGYRVGRVEQTETPEMLKVRNSSLAKKA---KVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKH---LLALKETFDSAQK-----------------TVRFGVCMVDCSTGAFQLSEFDDTEQRDRLKTLFAQFHIVEIVTERFNISDDTKMILKHAAPAAIRSSLRVGKEFWDASKTIDEIERAGYF-------------KEHGWPEDVLHFLEMDKVVKP---EGQLAISALGGCIWHLRRSIIDQELLSLCNFKRYKPSDEEAREARANKEA-------LSAAKAEL--------------NQQYVVLDSQTIQNLEVLCNSFNGSRSGSLIDIMDKTVTSFGGRMFQEWVLKPLCKIGDIQERIDAVEELGNSGDLMMEI-REFLRKLPDLERILSRIHALGSAHRSTEHPDSRAIMYESQTYNIRKIKDFLSVLNGFDEAMNLTLELGPRLSQSTSPILQSLLKRYRIEDGVVPDVKHGHFPDLTEKLEFFKRSFDQAAAKKSGVIVPQDGVDPEFDAACAD-----------------IAQIEAELSEYLKEQRSALRCQNINYWGKKKEDRYQLEVPESALSK--QPKEYELKSRKKGYKRFHTPTIRGLLKRLATAEDQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLLSSQSEGYTKPEVVAASAANGGTPFIDIEEGIHPCVAATYGSGDFIPNDAHLGIE-GKGQ--------MVLLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLYVELAETATILNHATSHSLVILDELGRGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVGSDKVSLGHMGCIVDP-ENDRKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIECAAKKSEQFERSLQANSHTEL---ENLRLAQKVKEALAEGE-------AGIDKLKQLWEEAR 1275
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A0P1AKS9_PLAHL (DNA mismatch repair protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKS9_PLAHL) HSP 1 Score: 875 bits (2261), Expect = 2.120e-290 Identity = 505/1053 (47.96%), Postives = 667/1053 (63.34%), Query Frame = 3
Query: 1257 LPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGTDGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGM-----PEVYATTS-VESALLRKCVL-----PMSDGGQFPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTIAS---FIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL 4367
LP V G H H L WL+KDR D + + + PDY+PRTL+VP FL K+TPAM QWWE K++NMDT+LFFKVGKFYELFH DADVG +EL+LIYMKGEKAHSGFPEI+Y K + LV+KG+RVARVEQ ETPDML+ RN++ K KVV+RE+CS+LS GT T FLD S+ D SP+ +L++ ET + +GICMVD + F L +F D R RL+TL AQ VEI+ ++ ++S T +++ P A + LR G EFWDA +T++E+ + YF K + H+ + +AV +G +A+SALGG IWH+RR++ID +LLS+ F Y PSD+ A ++ KA+L Q ++VLD ++ NLEVL NS +G GSL +++ T+FG+R+ +DWV+KPL I RLDAV EL N+ + RA L+ LPD+ERLLSR+H++ S HRS+EHP+SRAIMYE Y++RK+ DFL VL+G + A + P + + S + ++LR+ + P G FP++T + FF+ +FD A+ GVI P+ GVDP FD A + I N+E EL YL +QR +LRC +I YWG K D+YQLEVPE L+K QP +YELKS+KKG+KRF T I+ L+ +A+AE Q A RDQ RR+F KFD W AV+CLA +D L+SL +SSQ G+S+P +T + FI ++ HPC+A TY GG++IPND+ LG G+ M++L+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST FVEL+ETA IL+HATS SLVILDELGRGTSTFDGTAIA AV L+ +C MFATHYHSLVEE++ + +V+LGHM C+VD E+ VTFLYKL G CPKS+GINVA LA LP+ VI A +KSE+FER+L
Sbjct: 243 LPSTVAGAGNHMHDSLPWLHKDRRDINGQTPDSPDYDPRTLWVPPEFLKKETPAMVQWWEVKAQNMDTILFFKVGKFYELFHMDADVGFKELNLIYMKGEKAHSGFPEIAYSKMSAQLVAKGYRVARVEQTETPDMLKARNSTLAKKA---KVVRREMCSLLSIGTNTASFLDAPFSSQDQSPK---YLLALKETCDVTQKK-----------------VRFGICMVDCASGAFQLSEFDDTEQRDRLKTLFAQFNVVEIVTERFHISTDTKLLLQHTVPAAIRSALRVGKEFWDASKTVDEIERAGYF-------------KDHGWPEEVLHYLEMDKAVKP---EGQLAISALGGCIWHLRRSIIDQELLSLCNFKRYKPSDEEARQARA-------ENKALSAAKAEL--------------NQQYVVLDSQTIQNLEVLCNSYNGSRSGSLIDIMDKTVTSFGRRMFQDWVLKPLCKIGDIQERLDAVEELGNSSDLMMEI-RAYLRLLPDLERLLSRIHALGSAHRSNEHPDSRAIMYESQIYNVRKIKDFLAVLNGFDKAMNLAFELGPRLSQSKSTILQSILRRYKIEDAFQPNVRHGLFPDLTEKLEFFKRSFDQTSARTSGVIVPQAGVDPEFDAACIE-----------------IANVEEELANYLSKQRTALRCQQISYWGKKKEDRYQLEVPESALSK--QPIEYELKSRKKGYKRFHTATIRALLKRLANAEDQKEGALRDQTRRIFYKFDTDYKHWMKAVQCLAVLDCLVSLGLLSSQSEGYSKPEVVAASTDNNGIPFIEIEEGVHPCVAATYTGGDFIPNDTRLGIE-GKGQ--------MVVLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPATKCRLSPVDRIFTRIGASDRILAGQSTLFVELAETATILNHATSHSLVILDELGRGTSTFDGTAIAFAVIEHLLGDIQCRTMFATHYHSLVEEYAENDKVSLGHMGCIVDSGN-ERKVTFLYKLEEGMCPKSYGINVAMLANLPDEVIRCAAKKSEQFERSL 1205
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Match: A0A3M6V7P2_9STRA (DNA mismatch repair protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7P2_9STRA) HSP 1 Score: 871 bits (2250), Expect = 1.700e-288 Identity = 505/1059 (47.69%), Postives = 670/1059 (63.27%), Query Frame = 3
Query: 1257 LPEGVLDTGRHTHHGLNWLYKDRVDKDRRRSNDPDYNPRTLYVPRGFLDKQTPAMRQWWEFKSENMDTVLFFKVGKFYELFHQDADVGMQELDLIYMKGEKAHSGFPEISYGKFADILVSKGFRVARVEQVETPDMLRIRNASKGKSQARDKVVKRELCSILSRGTRTYCFLDDVSSAPDGSPRSVNMILSITETAITASAENGDVDDAAEPDGPPPAACEYGICMVDSTTATFSLGQFADDPARSRLRTLLAQQLPVEILMKKDNLSETTVHMMKCMAPLASHNVLRKGDEFWDAPRTIEELHKGRYFENTEDGSTSKLSTKPRKGNSDTTHWPSILRAVIDGGT----DGAMALSALGGAIWHIRRALIDHDLLSMQRFGAYIPSDQTYGAASPLVGASVLAGSSIDQEKADLPSASSLPGSSTGASQQSHMVLDGVSLSNLEVLRNSCDGGEKGSLWGFINRCSTAFGKRLLKDWVMKPLLMPRYINARLDAVGELSNALSPEADASRALLKRLPDVERLLSRVHSMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLGVLDGLEAADGM-----PEVYATTS-VESALLRKCVLPMSDGGQ-------FPNMTSAISFFRNAFDAAPAKRDGVIKPKPGVDPLFDEAKVSSGDRVACYPEGKDVYECIKNIESELKEYLQEQRRSLRCSEIVYWGSAK-DKYQLEVPEKHLAKNGQPPDYELKSKKKGWKRFWTPFIQEKLQEMADAEQQLGDAQRDQMRRLFAKFDEHRDLWASAVRCLAHVDALLSLAEVSSQP-GFSRPTFYEGTTI---ASFIRLKNARHPCLAQTYQGGEYIPNDSALGATPGELMDDTPPAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGSFVPADEAHMTPFDRIFTRVGASDRILAGQSTFFVELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHFLVKSAKCLAMFATHYHSLVEEWSHHSEVALGHMSCLVDDNEGEQMVTFLYKLAPGPCPKSFGINVARLAQLPNAVISAAKRKSEEFERAL 4367
LP V TG H H L WL++ R D + + DY+PRTL VP FL K+TPAM QWWE K+ NMDTVLFFKVGKFYELFH DADVG +EL+LIYMKG+KAHSGFPEI+Y K + LV+KG+RVARVEQ ETPDM+++RN++ S + KVV+RE+CS+LS GT T FLD AP S V+ L + + + + +G+CMVD +T F L +F D R RL+TL AQ VEI+ ++ N+SE T ++K AP A + LR G EFWDA +TI+E+ + YF+ E G WP + ++ DG +A+SALGG IWH+RR++ID +LLS+ F Y PSD+ E D + SS ++ G Q ++VLD ++ NLEVL NS +G GSL +++ T+FG+R+ ++WV+KPL R I RLDAV EL N + R L+RLPD+ERLLSR+H++ S HRS EHP+SRAIMYE +Y++RK+ DFL VL+G + A + P + +TS + LL++ + DGG FP++T + +F+ +FD A AK+ GVI P+ GVD FD A V I +E+EL EYL EQR +LRC EI +WG K D+YQLEVPE L+K QP +YELKS+KKG+KRF TP I+ L+ ++ AE Q +A +DQ RR+F KFD W AV+CLA +D L+SL +SSQ G+++P ++ FI +K+ HPC+A TY G +IPND+ LG G+ M+LL+GPNMGGKSTLLRQTC++ ++AQ+GSFVPA + ++P DRIFTR+GASDRILAGQST ++EL+ETA IL+HATS SLVILDELGRGTSTFDGTAIA+AV L+ +C MFATHYH+LVEE++ + +V+LGHM C+VD E ++ VTFLYKL G CPKS+GINVA LA+LP+ VI A +KSE+FE +L
Sbjct: 264 LPSAVAGTGNHIHDSLPWLHEKRRDINGNTPDSLDYDPRTLMVPPEFLKKETPAMVQWWEVKAHNMDTVLFFKVGKFYELFHMDADVGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVAKGYRVARVEQTETPDMMKVRNST---SATKAKVVRREVCSLLSIGTNTVSFLD----APISSQDEVSKHLLALKESFDLARKT----------------VRFGVCMVDCSTGAFQLSEFDDTEQRDRLKTLFAQFHIVEIVTERFNVSEDTRMVLKHAAPAAIRSSLRVGKEFWDASKTIDEIERAGYFK--EHG------------------WPEDVLCFLEMDKVVKPDGQLAISALGGCIWHLRRSIIDQELLSLCNFKRYKPSDE---------------------EARDARANSSAISAAKGELNQQYVVLDSQTIHNLEVLSNSYNGSRSGSLIDIMDKTVTSFGRRMFQEWVLKPLCKTRDIQERLDAVEELGNNGDLMMEI-REFLRRLPDLERLLSRIHALGSAHRSEEHPDSRAIMYESQQYNVRKIKDFLSVLNGFDTAMNLTLELGPRLSQSTSPILQVLLKRHSI--EDGGHSGATHGHFPDLTKKLEYFKRSFDQAAAKKSGVIVPQTGVDLEFDAACVE-----------------IAQVEAELAEYLCEQRIALRCREISFWGKKKEDRYQLEVPESALSK--QPKEYELKSRKKGYKRFHTPTIRNLLKRLSTAEGQKEEALKDQTRRIFHKFDVDYKYWMKAVQCLAVLDCLVSLGLLSSQSEGYTKPEVVAASSANGGTPFIDIKDGVHPCVAATYDNGNFIPNDARLGID-GKGQ--------MVLLSGPNMGGKSTLLRQTCILTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLYMELAETATILNHATSHSLVILDELGRGTSTFDGTAIAYAVVEHLLSDIQCRTMFATHYHTLVEEYASNGKVSLGHMGCIVDP-ENDRKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIQCAAKKSEQFEHSL 1226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33.8842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33.8842.1 >prot_H-paniculata_contig33.8842.1 ID=prot_H-paniculata_contig33.8842.1|Name=mRNA_H-paniculata_contig33.8842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1452bp MHCGALLSLVLDIATSSHTSCLLTSRRRLLSVILAWSMKPKKSPGKGQGTback to top mRNA from alignment at H-paniculata_contig33:1160..11738- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33.8842.1 ID=mRNA_H-paniculata_contig33.8842.1|Name=mRNA_H-paniculata_contig33.8842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10579bp|location=Sequence derived from alignment at H-paniculata_contig33:1160..11738- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33:1160..11738- >mRNA_H-paniculata_contig33.8842.1 ID=mRNA_H-paniculata_contig33.8842.1|Name=mRNA_H-paniculata_contig33.8842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8712bp|location=Sequence derived from alignment at H-paniculata_contig33:1160..11738- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |