prot_H-paniculata_contig32954.8835.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32954.8835.1
Unique Nameprot_H-paniculata_contig32954.8835.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
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BLAST of mRNA_H-paniculata_contig32954.8835.1 vs. uniprot
Match: D7FS41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS41_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 3.470e-32
Identity = 78/151 (51.66%), Postives = 99/151 (65.56%), Query Frame = 0 
Query:    2 SVSYEELAALRREKNHLLEKGNRLQQRLNLFMMKEHRGRVD---STLGEI-----LRCEDSRILQRVDSFSILIVVATLVACFSLPAFVLIELPTTRAMMILVFMFEMFAALMLSMISSYAKQAYNYGSIRNSRTARFLHSVRWITFTGQV 144
            +V + EL++LRREK  L EK  RLQ+R NL +      R +   S+ GE         ED RILQRVDSFSILIVV+TL+  FS+P     +L  TR++M +VF  EMFA +  S+IS YAKQA+NYGS  N RTARF++ VRWITF+ Q 
Sbjct:   73 AVLFGELSSLRREKALLREKDLRLQERTNLLLTTTRTARGEDGGSSDGEQPSATDSEAEDDRILQRVDSFSILIVVSTLITGFSIPTIEQAQLDVTRSIMTMVFALEMFATIFFSIISFYAKQAFNYGSTNNHRTARFMYHVRWITFSSQA 223
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BLAST of mRNA_H-paniculata_contig32954.8835.1 vs. uniprot
Match: A0A6H5JK33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK33_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 6.020e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 0 
Query:   52 EDSRILQRVDSFSILIVVATLVACFSLPAFVLIELPTTRAMMILVFMFEMFAALMLSMISSYAKQAYNYGSIRNSRTARFLHSVRWITFTGQV 144
            ED RILQRVDSFSILIVV+TLV  FS+P+    +L  TR++M LVF  EMFA +  S+IS YAKQA+NYGS  N RTARF++ VRWITF+ Q 
Sbjct:   26 EDERILQRVDSFSILIVVSTLVTGFSIPSIEQAQLGITRSIMTLVFALEMFATIFFSIISFYAKQAFNYGSTNNHRTARFMYHVRWITFSSQA 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32954.8835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS41_ECTSI3.470e-3251.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK33_9PHAE6.020e-2763.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..89
NoneNo IPR availableTMHMMTMhelixcoord: 63..82
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32954contigH-paniculata_contig32954:87..2119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32954.8835.1mRNA_H-paniculata_contig32954.8835.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32954 87..2128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32954.8835.1 ID=prot_H-paniculata_contig32954.8835.1|Name=mRNA_H-paniculata_contig32954.8835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MSVSYEELAALRREKNHLLEKGNRLQQRLNLFMMKEHRGRVDSTLGEILR
CEDSRILQRVDSFSILIVVATLVACFSLPAFVLIELPTTRAMMILVFMFE
MFAALMLSMISSYAKQAYNYGSIRNSRTARFLHSVRWITFTGQVNIR*
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