prot_H-paniculata_contig329.8822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig329.8822.1
Unique Nameprot_H-paniculata_contig329.8822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length165
Homology
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A6H5KI71_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI71_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 6.070e-31
Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:   11 LVLSPLYAMAFMTYPLSTLRNRPTCRSCRQSSTTLHMMAKPLQL------EADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKL 154
            L ++PLY  AF+    ++L +       R +S++  MM+ P +L      EA  +FDD V+  ++P LV FHA WC PC +  PV DQ+AE +DG  KVVK+DCD HK LMN YR RGLP   +F+ G+++ R EG L +D     L K+
Sbjct:   11 LFIAPLYVSAFVGVLPASLASLQ-----RGASSSARMMSVPFELPKVPQEEAVVAFDDAVVNQELPTLVYFHAKWCGPCIMQGPVFDQIAEEFDGKAKVVKLDCDNHKFLMNKYRVRGLPYTVLFHDGKVIARHEGHLGYDGQVEFLRKV 155          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A660Q6L9_9BACT (Thioredoxin n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A660Q6L9_9BACT)

HSP 1 Score: 107 bits (266), Expect = 4.750e-27
Identity = 45/108 (41.67%), Postives = 79/108 (73.15%), Query Frame = 0
Query:   48 MAKPLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKLV 155
            M+KP+++ +DA+FD+IV+KSDVPV+VDF A WC PCK++AP+++++A  YDG LKV K+D D++  + + Y+   +P + +F GG+L+ +  G L   ++   ++K++
Sbjct:    1 MSKPVEI-SDATFDEIVIKSDVPVIVDFWAPWCGPCKMIAPILEEIANEYDGKLKVAKMDVDSNTQIASQYKIMSIPSLLIFKGGQLVDQVIGALPKAQLLNYVSKVI 107          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A4Z0M356_9GAMM (Thioredoxin n=1 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0M356_9GAMM)

HSP 1 Score: 104 bits (259), Expect = 5.420e-26
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 0
Query:   48 MAKPLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKLV 155
            M++ +   +DA+FD  VL +DVPVLVDF A WC PCK++APV+D++AE YDG LKVVKVD D + ++   +  RG+P + +F GG     K G L   ++   + ++V
Sbjct:    1 MSEKIVHVSDATFDTEVLSADVPVLVDFWAEWCGPCKMIAPVLDEIAEEYDGKLKVVKVDVDANPEIPPKFGIRGIPTLILFKGGSAEATKVGALSKSQLSEFIKEVV 108          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: UPI0019D3F305 (thioredoxin TrxA n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3F305)

HSP 1 Score: 104 bits (259), Expect = 5.420e-26
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   48 MAKPLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKLV 155
            M++ +    DASFDD VLKSD+PVLVDF A WC PCK++APV+D++A  YDG LKV KVD D + D+   +  RG+P + VF  G     K G L   ++   + +++
Sbjct:    1 MSEQIVHVTDASFDDEVLKSDLPVLVDFWAEWCGPCKMIAPVLDEIASEYDGKLKVCKVDVDANPDIPPKFGIRGIPTLIVFKNGNAEATKVGALSKSQLADFVQEVL 108          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A3M1WDA5_9GAMM (Thioredoxin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1WDA5_9GAMM)

HSP 1 Score: 102 bits (255), Expect = 2.180e-25
Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 0
Query:   56 ADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAML 151
            +DASF+D VLKSDVPVLVD+ A WC PCK++AP++D++AE YDG +K+ K++ D + +    Y  RG+P + +F  GE+   K G L   ++ A L
Sbjct:    9 SDASFEDEVLKSDVPVLVDYWAEWCGPCKMIAPILDEIAEEYDGRIKIAKLNIDENPNTPPKYGIRGIPTLMLFKNGEVEATKVGALSKSQLAAFL 104          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A7Y1ZJW9_9GAMM (Thioredoxin n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZJW9_9GAMM)

HSP 1 Score: 102 bits (255), Expect = 2.180e-25
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   56 ADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKLV 155
            +D +FD+ VL SDVPVLVDF A WC PCK++APV+D++A  YDG LKV KVD D + D+   +  RG+P + VF GG     K G L   ++   +A++V
Sbjct:    9 SDDTFDNEVLNSDVPVLVDFWAEWCGPCKMIAPVLDEIAAEYDGKLKVCKVDVDANPDIPPKFGIRGIPTLIVFKGGNAEATKVGALSKTQLTEFIAEVV 108          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: UPI0016892272 (thioredoxin TrxA n=1 Tax=Spongiibacter pelagi TaxID=2760804 RepID=UPI0016892272)

HSP 1 Score: 102 bits (255), Expect = 2.180e-25
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   57 DASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLL 142
            D+SF+D VLKS++PVLVDF A WC PCK++APV+D++AE YDG LK+ K+D D + D    +  RG+P + +F GG     K G L
Sbjct:   10 DSSFEDEVLKSELPVLVDFWAEWCGPCKMIAPVLDEIAETYDGKLKICKIDVDANSDTPAKFSVRGIPTLMIFKGGNAEATKVGAL 95          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A5C7XF50_LYSSP (Thioredoxin n=1 Tax=Lysobacter sp. TaxID=72226 RepID=A0A5C7XF50_LYSSP)

HSP 1 Score: 102 bits (254), Expect = 3.080e-25
Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = 0
Query:   48 MAKPLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAK 153
            M+  +    DA FD +VL+SDVPVLVDF A WC PCK++AP +DQLA+ YDG  KVVKV+ + H +L   Y AR +PM+  F  G++   + G +    +  +L K
Sbjct:    1 MSDKIAHATDADFDALVLQSDVPVLVDFWAPWCTPCKMIAPFLDQLADEYDGRAKVVKVNIEAHPNLGRRYNARSIPMLLTFKNGQVHGTQIGAVGKPHLAQLLEK 106          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A1M4TZ13_9GAMM (Thioredoxin n=1 Tax=Thermomonas hydrothermalis TaxID=213588 RepID=A0A1M4TZ13_9GAMM)

HSP 1 Score: 102 bits (253), Expect = 4.370e-25
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   57 DASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAMLAKLV 155
            DA FD +VL SD+PVLVDF A WC PCK++AP +DQLAE Y G  K+VKVD D ++     Y  R +PM+ VF GG++   + G +   ++  ML K++
Sbjct:   10 DADFDRLVLASDIPVLVDFWAPWCGPCKMIAPALDQLAEEYAGKAKIVKVDVDQNQATAMKYHVRSIPMLLVFKGGQVQATQIGAVGKAQLAQMLDKVL 108          
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Match: A0A2N0KTJ9_9CHLR (Thioredoxin n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G4 TaxID=1926606 RepID=A0A2N0KTJ9_9CHLR)

HSP 1 Score: 102 bits (253), Expect = 4.490e-25
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 0
Query:   48 MAKPLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGTLKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEG 140
            MA P+ +  DA+FD+ VL+SD+PVLVDF A WC PCK+++PV+D+LAE YDG +K  KVD D++      Y  RG+P + +F+GG++ K+  G
Sbjct:    1 MAVPIAV-TDANFDEEVLQSDIPVLVDFWAEWCGPCKMISPVVDELAEEYDGKVKFTKVDVDSNPKTAMNYGIRGIPALLIFDGGKVAKQVVG 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig329.8822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI71_9PHAE6.070e-3142.67Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A660Q6L9_9BACT4.750e-2741.67Thioredoxin n=1 Tax=candidate division Zixibacteri... [more]
A0A4Z0M356_9GAMM5.420e-2644.44Thioredoxin n=1 Tax=Haliea sp. SAOS-164 TaxID=2562... [more]
UPI0019D3F3055.420e-2645.37thioredoxin TrxA n=1 Tax=Parahaliea mediterranea T... [more]
A0A3M1WDA5_9GAMM2.180e-2546.88Thioredoxin n=1 Tax=Gammaproteobacteria bacterium ... [more]
A0A7Y1ZJW9_9GAMM2.180e-2548.00Thioredoxin n=1 Tax=Halioglobus sp. TaxID=2024834 ... [more]
UPI00168922722.180e-2551.16thioredoxin TrxA n=1 Tax=Spongiibacter pelagi TaxI... [more]
A0A5C7XF50_LYSSP3.080e-2545.28Thioredoxin n=1 Tax=Lysobacter sp. TaxID=72226 Rep... [more]
A0A1M4TZ13_9GAMM4.370e-2547.47Thioredoxin n=1 Tax=Thermomonas hydrothermalis Tax... [more]
A0A2N0KTJ9_9CHLR4.490e-2549.46Thioredoxin n=1 Tax=SAR202 cluster bacterium Casp-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 52..158
e-value: 3.1E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR45663FAMILY NOT NAMEDcoord: 35..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.513
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 56..149
e-value: 2.8E-23
score: 81.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 49..156
score: 13.62
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 72..90
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 47..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig329contigH-paniculata_contig329:35405..38648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig329.8822.1mRNA_H-paniculata_contig329.8822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig329 34167..38676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig329.8822.1 ID=prot_H-paniculata_contig329.8822.1|Name=mRNA_H-paniculata_contig329.8822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
MAYLKLVAMVLVLSPLYAMAFMTYPLSTLRNRPTCRSCRQSSTTLHMMAK
PLQLEADASFDDIVLKSDVPVLVDFHASWCAPCKLLAPVMDQLAEAYDGT
LKVVKVDCDTHKDLMNFYRARGLPMMAVFNGGELLKRKEGLLDFDEVGAM
LAKLVLDFKTMPEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf