mRNA_H-paniculata_contig32870.8817.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL) HSP 1 Score: 123 bits (309), Expect = 5.490e-32 Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
YR+++GS M+ +G PD+ +A+ AR E+P E + KR+ YLS D+G++F + + L +VDADWA D+ DRK T + K+ G + WCSRKQ +V SS EAE VA +A KE ++L ++ + T+ EDN I++S+
Sbjct: 13 YRELIGSLMFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVVQWCSRKQAIVALSSCEAEYVAVCDAAKEVLWLLKVMNDLNLQVQLPVTMLEDNSGCISVSE 170
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 125 bits (315), Expect = 1.120e-31 Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
++ +VGS Y T PDL Y+V+ +R ME+P + KR+ Y+ GI++ + G L GFVD+D+A DV+DRK T+ Y+F L GGA++W S+KQ +VT S+TEAE VA + ++LR + G IG+ TTLF DN S I LSK
Sbjct: 156 FKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSK 311
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A0J7KRG1_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KRG1_LASNI) HSP 1 Score: 129 bits (324), Expect = 1.180e-31 Identity = 64/158 (40.51%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
YR+ VGS M+ + + PD+ +AV+ A++ + + + KR+F+YL DLGI++ + L GF DAD+A D+E R+ T Y+F L G + W SR+Q +VT S+TEAE +A A KE V+LR L +G+ C T L+ DN SAI ++K
Sbjct: 1392 YREAVGSLMFVAIVSRPDIAFAVNTASKFLNNHDQSHWQAVKRIFAYLVGTADLGIEYRSSGSESKLVGFSDADYAGDLETRRSTTGYLFSLASGPVTWSSRRQKIVTLSTTEAEYIAASSAAKEAVWLRNLLDEVGYRCDSPTVLYVDNQSAIKIAK 1549
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA) HSP 1 Score: 127 bits (320), Expect = 2.870e-31 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
YR+ +G M+A+ A PD+ YAV+ +R +P + + KR+F YL +LGI + +N L G+ DAD+A D++ RK T+ ++FKL GAI WCSR+Q ++ S+TEAE VA EA KE V++ L +G C G L DN SAI L K
Sbjct: 425 YREAIGCLMFAAISARPDIMYAVNVVSRYQNNPTIAHVNAVKRIFKYLKGTKELGILY---NNSGKLIGYSDADYANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAVWISGLLSEVGEKC-GGVALCVDNQSAIKLVK 578
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A1X7STY0_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7STY0_AMPQE) HSP 1 Score: 124 bits (311), Expect = 4.300e-31 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 4 EYRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
+Y+ VG Q+Y ST PD+ +AV A+ DP ++ + K + YL+ G+ F K +EG+ DADWA D++DRK Y+FKL+G +I+W SRKQ V S+ EAE ++ AG+E ++L +L + G TL+EDN +AI LSK
Sbjct: 178 KYQSAVGRQLYLSTTTRPDIAFAVSSVAKYTSDPTVQHWKAVKHIIRYLTGTVGYGLMFRKKKTAE-VEGYSDADWAGDIDDRKSILGYLFKLSGASISWRSRKQSCVALSTAEAEYISLATAGQEAIWLSQLINELKRGTEKPVTLYEDNQAAICLSK 335
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 124 bits (312), Expect = 1.050e-30 Identity = 67/159 (42.14%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSKE 483
YR+ +GS MYA+ G PD+ +A+ A+ ++P + KR+F YL +L +++GG G LEG+VDAD A E R Y+F ++GGA++W S+KQ LVT S+TEAE VA A KE +++R L G + G TTL+ D+ SAI L+K+
Sbjct: 247 YREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQ-EHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKD 402
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F) HSP 1 Score: 122 bits (305), Expect = 1.440e-30 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
Y+ ++GS MY T PD+ YAV +R ME P + KR+ Y+ D G+ F + +G G G+ D+D+A D++DRK T+ +IF LN GAI+W S+KQ +VT SSTEAE VA + + ++LR++ +G G TT++ DNIS I LS+
Sbjct: 100 YKQIIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSR 255
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A034V8I0_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V8I0_BACDO) HSP 1 Score: 125 bits (313), Expect = 2.060e-30 Identity = 67/160 (41.88%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 1 SEYRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSK 480
SEY+ ++G MY S PD+ ++V + A+R DP E + K + YL++ DL +++ + G ++GFVDADW D+ DRK + Y F L+G AI W S+KQ V SSTEAE VA E KE ++LR L IG T ++ DN+SA +LSK
Sbjct: 394 SEYQSLIGELMYLSVCTRPDIMHSVSKLAQRNADPHTEHVAGVKHILRYLASTADLKLRY--SACGKPVQGFVDADWGNDMMDRKSFSGYAFVLSGSAITWQSKKQQTVALSSTEAEYVALAEGVKEALFLRNLLNEIGCEQQEPTIIYGDNLSAQHLSK 551
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 125 bits (314), Expect = 2.590e-30 Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSKE 483
YR+ +GS MYA+ G PD+ +A+ A+ ++P + KR+F YL +L +++GG G LEG+VDAD A E R Y+F ++GGA++W S+KQ LVT S+TEAE VA A KE +++R+L G + G TTL+ D+ SAI L+K+
Sbjct: 1264 YREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQ-EHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRQLLGEVFRPLDGPTTLYSDSQSAIALTKD 1419
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Match: A0A369JJ40_HYPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JJ40_HYPMA) HSP 1 Score: 125 bits (313), Expect = 3.540e-30 Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 7 YRDMVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDLGIKFGGKSNGHGLEGFVDADWAEDVEDRKCTARYIFKLNGGAINWCSRKQ*LVTWSSTEAEDVATGEAGKETVYLRELQGSIGFGCMGSTTLFEDNISAINLSKE 483
YR+ VGS MYA+ G PD+ +A AA+ ++P + KR+F YL DL + +G + G LEGFVDAD A + R+ + Y+F ++GGA++W S+KQ LVT S+TEAE VA A KE ++LR L G + TTLF D+ SAI L+K+
Sbjct: 1358 YREAVGSLMYAAMGTRPDIAFATSTAAQFSDNPGWVHWEAVKRIFRYLLGTKDLELVYGAEQKG--LEGFVDADGASQ-DHRRAISGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAAMHAAKEAMWLRRLIGELFRPLSEPTTLFSDSKSAIALTKD 1513 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32870.8817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32870.8817.1 >prot_H-paniculata_contig32870.8817.1 ID=prot_H-paniculata_contig32870.8817.1|Name=mRNA_H-paniculata_contig32870.8817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp MVGSQMYASTGATPDLEYAVHQAARRMEDPCLEDFSTCKRLFSYLSTVPDback to top mRNA from alignment at H-paniculata_contig32870:619..1101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32870.8817.1 ID=mRNA_H-paniculata_contig32870.8817.1|Name=mRNA_H-paniculata_contig32870.8817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=483bp|location=Sequence derived from alignment at H-paniculata_contig32870:619..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32870:619..1101+ >mRNA_H-paniculata_contig32870.8817.1 ID=mRNA_H-paniculata_contig32870.8817.1|Name=mRNA_H-paniculata_contig32870.8817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig32870:619..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |