prot_H-paniculata_contig11376.880.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11376.880.1
Unique Nameprot_H-paniculata_contig11376.880.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length268
Homology
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: D8LRG1_ECTSI (HNH endonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG1_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 1.070e-115
Identity = 159/214 (74.30%), Postives = 184/214 (85.98%), Query Frame = 0
Query:   30 VKMRHEVAYQVAQSR-GARNHKKFSLTGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEI 242
            VKM++EVA QVA ++ G+R  +  +  GG+DSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVF EKV V+ATY +RS+RS  + V+LPSVIALKEFVNNH + P FTRRNLFLRD H+CQYC KYF PH+LSFDHVVPKKLGGKGTW+NVVTACGRCNNRKSDCHP++L+SIGM LA +P  PTF QLQA A++YPP  IHETW ++LYFESEI
Sbjct:  106 VKMKNEVALQVATNKKGSRRTRTVNFNGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSVRSPSVVVQLPSVIALKEFVNNHRTHPPFTRRNLFLRDSHQCQYCQKYFAPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLKSIGMSLAKYPVTPTFSQLQAKARRYPPLEIHETWGDYLYFESEI 319          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A836CK35_9STRA (HNH endonuclease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK35_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.210e-85
Identity = 120/193 (62.18%), Postives = 156/193 (80.83%), Query Frame = 0
Query:   58 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEINFEGEDDE 250
            L+SCP LVLNADYQPLSYLPLSLW WQ+ IKAV+M++V V+AT++ R +RSA++E+KLPSVIALK +VN H+  P+FTRRNL+LRDG++C YC K F   DLSFDHV P+KLGG  +W NVVT+C RCNN K DCHPK+L  IGMRL   P +PTF++LQ  A++YPP++IH+TW E+LY++S I    +D++
Sbjct:   78 LESCPALVLNADYQPLSYLPLSLWPWQEAIKAVWMDRVVVLATHD-RYVRSANVELKLPSVIALKGYVNQHAKVPSFTRRNLYLRDGYQCAYCSKQFQAGDLSFDHVTPRKLGGPTSWTNVVTSCHRCNNAKGDCHPKSLSRIGMRLNKAPHIPTFYELQNQARRYPPKLIHKTWAEYLYYDSAIEARLQDEQ 269          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A7S1XLE6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLE6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 9.030e-71
Identity = 106/183 (57.92%), Postives = 131/183 (71.58%), Query Frame = 0
Query:   58 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFES 240
            LD+CP LVLNADYQPLSY+PLSLW WQ+ IK+V + KV VVA YN+  I +   E+ LPSVIALK++V     TPAFTRRNL+LRD ++C YC +YF   +LS+DHV+P+  GG   WENVVT C  CN RK + HP  L+ IGMRL   P  PT +QLQ  A+KYPPR+ H TWE +L + S
Sbjct:  154 LDTCPALVLNADYQPLSYMPLSLWSWQETIKSVLLGKVNVVAHYNDIFIHTIDEEIPLPSVIALKDYVKPDHKTPAFTRRNLYLRDNYRCAYCARYFYSQELSYDHVMPRFYGGGTNWENVVTCCVDCNGRKGNVHPNKLQDIGMRLLKKPTKPTSYQLQQQARKYPPRLRHSTWESWLGYTS 336          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A7R9UEZ0_9STRA (Hypothetical protein n=4 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEZ0_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.940e-70
Identity = 104/184 (56.52%), Postives = 132/184 (71.74%), Query Frame = 0
Query:   58 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESE 241
            LD+CP LVLNADYQPLSY+PLSLW WQ+ IKAV + KV+VV  Y +  I +   E+ LPSVIALKE+V      PAFTRRNL+LRD ++C YC +YF    LS+DHV+P+  GG  +W+NVVT+C  CN RK + HP  L  IGMRL + P  PT +QLQ  A+KYPPR+ H+TWE +L + +E
Sbjct:  154 LDTCPALVLNADYQPLSYMPLSLWSWQETIKAVLLGKVSVVERYPDVKIHTIDQEIPLPSVIALKEYVKPDHKVPAFTRRNLYLRDNYRCAYCARYFYSQQLSYDHVLPRFYGGSTSWDNVVTSCTDCNGRKGNLHPSKLHEIGMRLLVQPKRPTSYQLQQQARKYPPRLKHKTWEMWLSYSAE 337          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A2E4F2L9_9PROT (HNH endonuclease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4F2L9_9PROT)

HSP 1 Score: 218 bits (555), Expect = 3.200e-68
Identity = 98/186 (52.69%), Postives = 135/186 (72.58%), Query Frame = 0
Query:   58 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEIN 243
            +D+CP LVLNADY+PLSY PLSLW WQ+ +KAVF+++V +VA Y  + +RS   +++LPSVI+LK +V ++   PAFTR N+FLRDG  CQYC KYF  HDL+FDHV+PK  GG   W NV+TAC  CN RK +   + +  +GM L   P VPT ++LQ   ++YPP  +HE+W +FLY++SE++
Sbjct:    3 VDTCPALVLNADYRPLSYFPLSLWSWQETVKAVFLDRVHIVAEYE-QEVRSPSWQMRLPSVISLKRYVQSNRR-PAFTRFNVFLRDGFTCQYCRKYFDTHDLTFDHVLPKSRGGFTNWTNVITACASCNLRKGN---RLMAEVGMHLVYMPRVPTVYELQNVGRRYPPNYLHESWSDFLYWDSELD 183          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A7W6WA90_9PROT (5-methylcytosine-specific restriction endonuclease McrA n=2 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6WA90_9PROT)

HSP 1 Score: 215 bits (548), Expect = 3.930e-67
Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 0
Query:   54 LTGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEIN 243
            + GG    P LVLNADY+PLSY PLSLW WQD +K+VF+++V VV  Y+   IRS  +EV+LPSVI+LKEFV+  +  PAFTR N+FLRD   CQYC + FP H+L+FDHVVP+  GG+ TWENVVTAC  CN RKS+  PK   +  M L   P VPT H LQ   + +PP  +HE+W ++LY++SE++
Sbjct:    1 MEGGPPHAPALVLNADYRPLSYFPLSLWPWQDAVKSVFLDRVHVVCEYDT-VIRSPSLEVRLPSVISLKEFVST-ARMPAFTRFNVFLRDRFTCQYCGRRFPTHELTFDHVVPRSWGGRTTWENVVTACAACNLRKSNRTPK---TASMPLMREPRVPTHHALQDVGRAFPPNFLHESWRDYLYWDSELD 185          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A7S2S5X4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5X4_9STRA)

HSP 1 Score: 222 bits (565), Expect = 7.690e-67
Identity = 102/203 (50.25%), Postives = 142/203 (69.95%), Query Frame = 0
Query:   50 KKFSLTGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEINFEGEDDEGT 252
            K  +    L+ CP LVLNAD+QPLSY+PLS+W WQD IKAVF E+V VVA Y +  +RSA + V++PSVIALK++V    +TP FTRRN+FLRD + CQYC        L+FDHV+P+  GG  +W NVVTAC RCNN+K D  P+ L  +G+ L   P VP+ ++LQAAA+K+PP+++H TW ++L ++   + +  ++ GT
Sbjct:  201 KSVNYFNNLEQCPVLVLNADFQPLSYIPLSIWSWQDAIKAVFAERVVVVANYEHE-VRSASVAVQVPSVIALKQYVPQARATPTFTRRNVFLRDSYCCQYCGTCAQTQHLTFDHVLPRSKGGDTSWNNVVTACHRCNNKKKDMMPQQLHHLGLSLLREPRVPSHYELQAAARKFPPKVMHHTWRDYLAWDESASKKRGEETGT 402          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A848V1P5_9PROT (HNH endonuclease n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V1P5_9PROT)

HSP 1 Score: 212 bits (540), Expect = 7.520e-66
Identity = 101/185 (54.59%), Postives = 135/185 (72.97%), Query Frame = 0
Query:   58 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEI 242
            L S PCL+LNADYQPLSY PLSLW WQD +KAVF+++V VV  Y+ R +RSA  E+ LPSV+ALK++V+ + S PAFTR NLFLRDG KC YC   + P +L+FDHV+P++LGG+ +W N+  AC  CN +K    PK+    GMR A+ P  PT HQLQA  +K+PP  +HE+W ++LY++ E+
Sbjct:   13 LGSSPCLILNADYQPLSYFPLSLWSWQDAVKAVFLDRVNVVNHYD-RVVRSASFEMLLPSVVALKDYVSQNRS-PAFTRFNLFLRDGFKCVYC---YSPDELTFDHVIPRRLGGRTSWTNIAAACSSCNLKKGGRLPKD---AGMRPAVKPYKPTMHQLQAQGRKFPPNHLHESWLDYLYWDVEL 189          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: UPI00167299FA (HNH endonuclease n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167299FA)

HSP 1 Score: 212 bits (540), Expect = 9.750e-66
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 0
Query:   57 GLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEINFEGEDDEG 251
            G D+ P LVLNAD++PLSY PLSLW WQD +KAVF+++V +V+ Y+   +RS   E+KLPSVIALKE+V+  S  PAFTR N+FLRD   CQYC   FP H+L+FDHVVP+  GG+ +WENVVTACG CN RK +  P   R+IGM   + P  PT + LQ A + +PP  +HE+W ++LY++ E+    +DD+G
Sbjct:    3 GPDNAPALVLNADFRPLSYFPLSLWSWQDAVKAVFLDRVNIVSHYDT-VVRSPSFEMKLPSVIALKEYVHQ-SRKPAFTRFNVFLRDRFACQYCGDRFPTHELTFDHVVPRSRGGRTSWENVVTACGACNLRKGNHMP---RAIGMVPQVTPRQPTAYDLQDAGRGFPPNYLHESWRDYLYWDIELE---QDDDG 189          
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Match: A0A5J4Z0M3_PORPP (HNHc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0M3_PORPP)

HSP 1 Score: 215 bits (548), Expect = 4.530e-65
Identity = 103/200 (51.50%), Postives = 138/200 (69.00%), Query Frame = 0
Query:   43 SRGARNHKKFSLTGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVATYNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYCLKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSIGMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEI 242
            +RG       +L   L+SCP LVLNADYQPLSYLPLSLW W +V+KA+ +++V VV TY++  +RSA  E  +PSV+ +KE+       PAF+R N+FLRD   CQYC +   P DL+FDHVVPK  GGK  WENVVTAC  CNNRK     K+LR  GMRL   P VP+ ++LQ  A+++PP+ +HE+W ++LY++ E+
Sbjct:  114 TRGGNVSGSENLAMRLESCPALVLNADYQPLSYLPLSLWPWTEVMKALCLDRVRVVETYDHIKVRSASAEFPVPSVVVMKEYAKISKKRPAFSRYNVFLRDQFSCQYCGQSHRPVDLTFDHVVPKSRGGKLCWENVVTACISCNNRKGSMLLKDLR--GMRLQRTPKVPSLYELQQCARRFPPKYLHESWVDYLYWDQEM 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11376.880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG1_ECTSI1.070e-11574.30HNH endonuclease family protein n=1 Tax=Ectocarpus... [more]
A0A836CK35_9STRA1.210e-8562.18HNH endonuclease family protein n=1 Tax=Tribonema ... [more]
A0A7S1XLE6_9STRA9.030e-7157.92Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UEZ0_9STRA3.940e-7056.52Hypothetical protein n=4 Tax=Pinguiococcus pyrenoi... [more]
A0A2E4F2L9_9PROT3.200e-6852.69HNH endonuclease n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A7W6WA90_9PROT3.930e-6754.745-methylcytosine-specific restriction endonuclease... [more]
A0A7S2S5X4_9STRA7.690e-6750.25Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A848V1P5_9PROT7.520e-6654.59HNH endonuclease n=1 Tax=Hellea sp. TaxID=2715692 ... [more]
UPI00167299FA9.750e-6653.33HNH endonuclease n=1 Tax=Thalassobaculum fulvum Ta... [more]
A0A5J4Z0M3_PORPP4.530e-6551.50HNHc domain-containing protein n=1 Tax=Porphyridiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 134..187
e-value: 4.6E-11
score: 52.8
NoneNo IPR availableGENE3D3.30.40.60coord: 118..216
e-value: 5.8E-20
score: 72.9
NoneNo IPR availablePANTHERPTHR33877:SF2coord: 49..239
NoneNo IPR availablePANTHERPTHR33877FAMILY NOT NAMEDcoord: 49..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR029471HNH endonuclease 5PFAMPF14279HNH_5coord: 147..197
e-value: 1.5E-15
score: 56.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11376contigH-paniculata_contig11376:338..5692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11376.880.1mRNA_H-paniculata_contig11376.880.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11376 110..7957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11376.880.1 ID=prot_H-paniculata_contig11376.880.1|Name=mRNA_H-paniculata_contig11376.880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=268bp
MDRFRFLLGALCTLYIFLCMCVYCFGWVTVKMRHEVAYQVAQSRGARNHK
KFSLTGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFMEKVTVVAT
YNNRSIRSAHMEVKLPSVIALKEFVNNHSSTPAFTRRNLFLRDGHKCQYC
LKYFPPHDLSFDHVVPKKLGGKGTWENVVTACGRCNNRKSDCHPKNLRSI
GMRLAMWPAVPTFHQLQAAAKKYPPRMIHETWEEFLYFESEINFEGEDDE
GTGANVKPEASEGGQPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR029471HNH_5