mRNA_H-paniculata_contig3280.8801.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A6H5KUT1_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUT1_9PHAE) HSP 1 Score: 361 bits (927), Expect = 1.940e-115 Identity = 221/434 (50.92%), Postives = 270/434 (62.21%), Query Frame = 2
Query: 47 VPWKSLSRA-----VIEVLIIMLSSRIIGAGGVSGEGQC--IQQLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNGIDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYR--SSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQGFLMPSDA----TDRLGGENELGAQGEQAGAEASCGNVLLGEGAEDARMAVFLTDEDLEAINALDGTL 1309
+PWK L+RA ++ +L+ +S GA GE +C I +LP VQLNNGV +PRIGFGTAGLG +EEAV +AL AGYRHIDTAQAQEWYRE+AVGRAL +A S+ P + TA + G L LP RE VFVTTK+HPRDF A+RL MVE S NL G+DLLLLH+P W+ AWR+LE +Y++G+VRAIGVSNFS SLLRELL MATV PA VQNWMDPF+QD+ VR+LCAE+GI Y+AYSTLGGQW +R SS NPVS D TL IA H TS Q VALSWALQ+GA++LPRSSNL RI+ N + F+ DA DR G+ E GA A+ CG + GE A + VFLT +D+ A++ LDG++
Sbjct: 1 MPWKVLARASAACWLMAMLLDGQASSAAGALDAGGE-ECRIIPRLPSHVQLNNGVIIPRIGFGTAGLGQATEEAVAVALTAGYRHIDTAQAQEWYREEAVGRALKQATLSKTDLSPREKEGESFTA------MSGAAL--------------LP---REHVFVTTKIHPRDFGAERLGAMVEASSSNLQGVDLLLLHAPFCWPGSCPVNPAP----------------WQDAWRQLEDMYSKGAVRAIGVSNFSESLLRELLGMATVAPAAVQNWMDPFHQDREVRALCAEHGIAYIAYSTLGGQWAHRPSSSMSPNPVSTDPTLIAIASAHGTSVQTVALSWALQSGAIILPRSSNLDRIKGNHEAFIKVDDAFSSLRDRGDGKTE-GAGDGGGSAKQRCG--IAGESNSGAEVEVFLTVDDIRAVDRLDGSI 391
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A7S2UWQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ9_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.910e-57 Identity = 139/403 (34.49%), Postives = 187/403 (46.40%), Query Frame = 2
Query: 125 GVSGEGQCIQQLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAAD-RLRKMVETSRHNLNG--IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVP----PAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSM-DTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQGFLMPSDATDRLGGENELGAQGEQAGAEASCGNVLLGEGAEDARMAVFLTDEDLEAINALDGTL 1309
G + + C+ +P T L NGV++P +GFG AGLG ++ V A+ AG+ H D+AQAQEWY E +G+AL + ++R +F+ TK+HPRD+ R R+ ++ S NL IDL+LLH P+ W+ AW L+ Y G VRAIGVSNF+ + LREL M +P P VVQNWMDP++QD+AVR C ENG++Y AYS G QW Y + V++ D + IAE+H P +V LSWALQ G V+PRSS + I+ N + F P D LL VFL ED+E IN+LDG L
Sbjct: 1 GRAEDDACVNPIPATFNLTNGVRVPLLGFGLAGLGDGTKGVVEHAVEAGFTHFDSAQAQEWYNEAGLGQALE----------------------------------------------GMDDSARSALFLVTKLHPRDYLPKARAREALQASPRNLGTEVIDLVLLHRPNCWYGSCEDAKKDP---------------WKDAWEVLQEWYLAGKVRAIGVSNFNTAQLRELWVMGGLPGGVRPHVVQNWMDPYHQDRAVRRWCKENGVLYTAYSQFGAQWQYMGVGVEGNVALADPVIVEIAEKHQVHPAMVVLSWALQEGISVIPRSSKQENIRANAKLF-GPDD--------------------------TLL----------VFLAPEDVEKINSLDGKL 305
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: C1DYI8_MICCC (Aldo_ket_red domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DYI8_MICCC) HSP 1 Score: 202 bits (514), Expect = 1.020e-55 Identity = 138/352 (39.20%), Postives = 172/352 (48.86%), Query Frame = 2
Query: 125 GVSGEGQCIQQLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNL--NGIDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ--GFLMPSD---ATDRLGG 1159
G G G + V LN+G MP +GFGTAGLG ++ A AL AGYR +DTAQA EWYRED VG A+ RAF A G +RE++F+T+K+HPRD A+R + M+E+S NL + +DL LLH P +W +WR LE L G VR+IGVSNF + LREL A V PAVVQ D F+ DK R LC Y AYS+LG QW R +NPV + RIA + SP V L WA+Q+G +V+PRSSN RI ENL G+ + D A D L G
Sbjct: 19 GADGTGSLDPRAIGNVVLNSGHAMPLVGFGTAGLGDMTATATKWALQAGYRLVDTAQAPEWYREDLVGEAI-RAF-----------------------------------LASGG-------ATREELFITSKLHPRDHGAERAKAMLESSLTNLGVDYLDLFLLHYP--------------ACWGTLCGGVEPQGTWRDSWRALEELQRAGKVRSIGVSNFDVNELRELAEWARVEPAVVQRNSDIFSADKEARQLCESKRWQYEAYSSLGSQWLMRGHR-ENPVLTHADVKRIARKKGKSPAQVVLRWAIQHGQIVIPRSSNRARIAENLDVAGWTLGDDDMFALDALDG 312
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A7S2SM38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM38_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.300e-54 Identity = 123/350 (35.14%), Postives = 181/350 (51.71%), Query Frame = 2
Query: 77 IEVLIIMLSSRIIGAGGVSGEGQCIQQLPPTVQLNNGVQMPRIGFGTAGLG-HISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNG--IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ 1117
+E+ I++L + A G + QC V++ N V +PR+GFGTA +G + ++V +A+ G+R D A+A EWY + A+G AL+ A ID ++ +R+ +F+ +KVHP++ + K + NLN +DLLLLH P +W+ +WR LE YN+G ++AIGVSNF ++ELL A V P +VQNWMDPFNQD VR LC EN ++Y +YSTLGGQW + +N V T+ +IA+++NTS Q + L WALQ G +V+PRSS LK I++N +
Sbjct: 1 MEIAILLLFAVAYAANG--SQSQCDSDA--RVEMWNKVSIPRVGFGTAAMGGQTTIDSVTMAVENGFRFFDGAEATEWYDDYALGTALNAA-------------------------IDNKIV------------------TRQSLFIASKVHPKNLGSKNTEKAILHILDNLNVKYLDLLLLHYP------------VCGHWIPQCKGIEVEGTWKDSWRVLEDYYNKGIIKAIGVSNFEYDQMQELLEFANVKPHMVQNWMDPFNQDTDVRRLCDENDVLYTSYSTLGGQWEHIKG--ENLVKTSPTIQKIAKKYNTSVQQLVLKWALQKGVIVIPRSSTLKNIRKNAE 289
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A7S0NJX3_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NJX3_MICPS) HSP 1 Score: 201 bits (511), Expect = 5.900e-54 Identity = 136/337 (40.36%), Postives = 169/337 (50.15%), Query Frame = 2
Query: 170 VQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNL--NGIDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ--GFLMPSD---ATDRLGG 1159
V LN+G +MP +GFGTAGLG ++ A AL AGYR +DTAQA EWYRED VG A+ RAF A GS RE++F+T+K+HPRD A+R + M+E+S NL + +DL LLH P +W +WR LE L G VR+IGVSNF + LREL A V PAVVQ D F+ DK R LC Y AYS+LG QW R +NPV + RIA + SP V L WA+Q+G +V+PRSSN RI ENL G+ + D A D L G
Sbjct: 151 VVLNSGHRMPLVGFGTAGLGDMTATATKWALQAGYRLVDTAQAPEWYREDLVGEAI-RAF-----------------------------------LASGS-------AKREELFITSKLHPRDHGAERAKAMLESSLTNLGVDYLDLFLLHYP--------------GCWGTLCGSVKPQGTWRDSWRALEELQRAGKVRSIGVSNFDINELRELAEWARVEPAVVQRNSDVFSADKEARQLCESKRWQYEAYSSLGSQWLMRGHR-ENPVLTHADVKRIARKKGKSPAQVVLRWAIQHGQIVIPRSSNRGRIAENLDVAGWTLGDDDMFALDALDG 429
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A836CIZ5_9STRA (Aldo/Keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ5_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.240e-53 Identity = 134/353 (37.96%), Postives = 177/353 (50.14%), Query Frame = 2
Query: 83 VLIIMLSSRIIGAGGVSGEGQCIQ--QLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNG--IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMA----TVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ 1117
+L+ +L+ ++GA V QC +P T LN+G MPR+G+GTAGLG V AL AG+RHID+AQA EWY E VG AL +A +EEG T + +P R+ +FVT+K+HPRDF A R RK S H+L +DL LLH +W+ AW L AL EG +R++GVSNF+ LR L+A A PAVVQNW DP ++D +R++CA + I YV+YSTLG Q R NPV + + IA TSP V LSWALQ+G VLPR+ +++N Q
Sbjct: 9 LLLSVLAVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKA------------------SEEGEVIFIRTPRK------------CIP---RDSIFVTSKLHPRDFGA-RTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPG---------------TWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGG---NPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQ 309
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A8J9S0C9_9CHLO (Probable 9,11-endoperoxide prostaglandin H2 reductase at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0C9_9CHLO) HSP 1 Score: 193 bits (491), Expect = 1.610e-49 Identity = 132/349 (37.82%), Postives = 170/349 (48.71%), Query Frame = 2
Query: 125 GVSGEGQCIQQLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNG-----IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ-GFLMPSDATDRL 1153
GV G+ + +P TV LNNGV MPR+GFGTAGLG +EEA AL +GYR +D+AQAQEWYRED VG A+ + S +P RE VF+T+K+HPR D M++ +R +L+G +DL LLH P +W +WR LE L ++G VRAIGVSNF L ELLAMA + PA+VQ DP D V++ C GI Y YSTLG QW NPV + RIA E V L WALQ+G ++PRSS +RI N + F++ +D R+
Sbjct: 332 GVCGQ-PFLTDVPETVTLNNGVVMPRVGFGTAGLGAATEEATMWALASGYRLLDSAQAQEWYREDLVGLAVLK--------------------------------------------SGVP---REQVFLTSKLHPRHHGRDEA--MIQFTR-SLSGLAVEEVDLFLLHYP-------------ACWPGLCGEGFTPKGTWHDSWRALEDLVDKGLVRAIGVSNFGIDELAELLAMARIKPALVQRHSDPLAADAEVQAFCRIAGIQYQGYSTLGSQWLSMGME-DNPVLTHAAVERIANETGRDAAQVVLRWALQHGQAIVPRSSKKERIAANRELDFVLSADQMQRI 615
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: I0YNU5_COCSC (Aldo/keto reductase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YNU5_COCSC) HSP 1 Score: 183 bits (464), Expect = 4.650e-49 Identity = 124/331 (37.46%), Postives = 156/331 (47.13%), Query Frame = 2
Query: 170 VQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNL--NGIDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQ-GFLMPSDATDRL 1153
V LNNGV MP +GFGTAGLG +EEA AL +GYR +D+AQAQEWYRED VG A+ + S +P RE VF+T+K+HPR + S L +DL LLH P +W +WR LE L ++G VRAIGVSNF L ELLAMA + PA+VQ DP D VR+ C GI Y YSTLG QW R +NPV + + R+A E V L WALQ+G ++PRSS +RI N F++ +D R+
Sbjct: 1 VTLNNGVVMPLVGFGTAGLGAATEEATAWALASGYRLLDSAQAQEWYREDLVGLAVLK--------------------------------------------SRVP---REQVFLTSKLHPRHHGREEAMIQFTKSLSALAVEQVDLFLLHYPECWPGLCGEGFTPKG-------------TWHDSWRALEDLVDKGLVRAIGVSNFGIDELAELLAMARIKPALVQRHSDPLAADAEVRAFCRLAGIQYQGYSTLGSQWLMRGMD-ENPVLTNPVVDRVANETGRDAAQVVLRWALQHGQGIVPRSSKKERIAANRDLDFVLSADQMHRI 270
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A4D9D7R8_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R8_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.170e-48 Identity = 124/359 (34.54%), Postives = 169/359 (47.08%), Query Frame = 2
Query: 83 VLIIMLSSRIIGAGGVSGEGQCIQQLPPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNG--IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQGFLMPSDATDRL 1153
V + + ++++ GG S + + +L NGV+MP +GFGTAGLG + A A++ G+RHIDTAQA EWY E A+ +++ +P RE +F+ TKVHPR F +R + S L +DLLLLH+ AWR LE+LY++G V+AIGVSNF+ L L + A VP VVQN MDPF QD+ VR+ C G++Y YSTLG QW R QNPV + +A+ H SP ++ L WA Q G V+PRSS K I E + L+P A DR+
Sbjct: 8 VALFLFAAKLSRVGGQSDHAEPKEG---NFRLRNGVEMPLVGFGTAGLGDGEQLAPLYAILKGFRHIDTAQATEWYNEAAIAQSVDEC--------------------------------------------GMP---REKLFLVTKVHPRYFGYERTLRSFNHSLAALRTSYVDLLLLHTSDCSDWTGLCEKDSSRGTFFD------------AWRALESLYHKGQVKAIGVSNFNVEQLEALSSTAVVPIHVVQNHMDPFKQDREVRAWCQARGVLYTGYSTLGTQW--RPPGGQNPVLNHPVIQTLAQRHGVSPALLVLVWARQEGVAVIPRSSEAKHIDELAR--LLPK-AKDRV 299
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Match: A0A7R9UZX6_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZX6_9CHLO) HSP 1 Score: 186 bits (471), Expect = 5.070e-47 Identity = 121/323 (37.46%), Postives = 156/323 (48.30%), Query Frame = 2
Query: 161 PPTVQLNNGVQMPRIGFGTAGLGHISEEAVWLALMAGYRHIDTAQAQEWYREDAVGRALSRAFGSQRQSEPTAAPVKGHTAEEGRESIDGTMLQHNSNAARGSEPSSLPPTSREDVFVTTKVHPRDFAADRLRKMVETSRHNLNG--IDLLLLHSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSWEIAWRELEALYNEGSVRAIGVSNFSASLLRELLAMATVPPAVVQNWMDPFNQDKAVRSLCAENGIVYVAYSTLGGQWTYRSSPPQNPVSMDTTLARIAEEHNTSPQVVALSWALQNGALVLPRSSNLKRIQENLQGF 1123
P + LNNGV+MP IGFG+A LG + AV AL GYRH+D+A A+EWYRED VG+ALS AF TA G +RE VF+TTK+HP++ + R+R + S +L +DLLLLH P W+ WRE+E LY G RAIGVSNF L EL+ MA V P V+Q +DP + S C +GI AYS+LG QW + NPV + A E + V L W LQ GA+VLPRSS+ + + ++LQ F
Sbjct: 311 PHALLLNNGVEMPSIGFGSAALGDGTAAAVQAALEVGYRHVDSAMAREWYREDLVGQALS-AF----------------TASSG--------------------------VAREQVFLTTKLHPKNLGSQRIRAALNASLSDLRTDYVDLLLLHYPRCFPGLPGCTSADVTRDSGSGSEL-----WKETWREMEQLYQHGKARAIGVSNFGLHELHELVGMAVVMPQVLQTHVDPLAPAFELGSFCLAHGIQLEAYSSLGTQWPLQQPGNLNPVLAHPGVKAAARETRRTAAQVVLRWVLQQGAVVLPRSSSREHMTQSLQLF 585 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3280.8801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3280.8801.1 >prot_H-paniculata_contig3280.8801.1 ID=prot_H-paniculata_contig3280.8801.1|Name=mRNA_H-paniculata_contig3280.8801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp MDRTVPWKSLSRAVIEVLIIMLSSRIIGAGGVSGEGQCIQQLPPTVQLNNback to top mRNA from alignment at H-paniculata_contig3280:10216..17328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3280.8801.1 ID=mRNA_H-paniculata_contig3280.8801.1|Name=mRNA_H-paniculata_contig3280.8801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7113bp|location=Sequence derived from alignment at H-paniculata_contig3280:10216..17328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3280:10216..17328+ >mRNA_H-paniculata_contig3280.8801.1 ID=mRNA_H-paniculata_contig3280.8801.1|Name=mRNA_H-paniculata_contig3280.8801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig3280:10216..17328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |