prot_H-paniculata_contig328.8798.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig328.8798.1
Unique Nameprot_H-paniculata_contig328.8798.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length725
Homology
BLAST of mRNA_H-paniculata_contig328.8798.1 vs. uniprot
Match: A0A6H5KI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI22_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 6.930e-142
Identity = 273/569 (47.98%), Postives = 342/569 (60.11%), Query Frame = 0
Query:   79 ARGDSLPEIFRSSEVVQIYHIQATAMLYEQGGLNHDMSFALTAVAFNSLERPEVKVSMAYYPTNMTISLLPVISEDGRELHWENQEASMGYVLDIDQAYWTGTSYMGETTGAFFSSAVEFSLAYHQDHPRYQPFSVYEDYPGRAFVTASSCDEYVWEVLSAAQERGVRLVPAVMPRKYKIVIYSQTEPEVITLGAQRDGDGDQVEEDTTPPGGDSTGGRGSSSTAVDNGNSTVDSSDRA--------------VGN--------------SGTASIVESSSSGAGTGGQGEADG------------------DST---DSVDSASGVNATRT-GAGEVGDGVRRRALLRGEGSL--SSADDAAADATAVVPSARTAIYPANEWGAILDRRFEMERGTSEEDGPSEAADGGSESENAVASTGDERGAEAGDNDDDADLEPVEAGMGT----AQTDDDWEQVVGYYQSLKLCLQERKYSYVTSLKDFARNFDCLDDVAFISKGPHEYYKVNLTSTKLDQITEPEDLPEVPRSEVGFTWVDISLVVWIVSILACGVHGMLWQGEVVQHWMKA 591
            A G ++  +FRSSEV+Q+YH+QATA LYEQGGLNHDMSF LT VA+ S+ERP+VKVS+AY+PTNMTISLLPVISEDGREL W++Q AS+ YV+ ++QAYW   SYMGETTGAFFS AVEFSL YH+ HPRYQPFSVYEDYPGR F+TAS CDE+VW +LSAAQ RGVRL+PA++P+K+KIVIYS ++PE+I       GDG             S GG G +   V+ G    ++                  VG               S  A + E          +G A G                  D T    SV S++G       G G    G  R+ LLRG   L  S   D+A +A               E GA+     E+E   +EE G +   +  +E+  A  ST                + P+EA + T    A+  D+W++VVGYYQSL+LCLQERK+S+VTSLKDF R FDCLDDVAFI+ GPHEYYKVN+TSTKLD I+ PE+LPEV R    FT VD +L VWI+ I+ACG+HG+LWQ  V+QHW+K+
Sbjct:   28 ASGATVGAVFRSSEVLQMYHLQATAELYEQGGLNHDMSFFLTGVAYYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVEQAYWNAGSYMGETTGAFFSYAVEFSLEYHRLHPRYQPFSVYEDYPGREFLTASGCDEFVWALLSAAQTRGVRLIPALLPQKHKIVIYSHSKPEIIVFS----GDGSSA----------SGGGNGDADEPVEGGAVPGEAGXXXXXXXXXXXXXXXXEVGXXXXXXXXXXXXXXXSDAAPVREEE--------EGHASGXXXXXXXXXXXXXXXPSVDETRNNSSVSSSTGQEGQEEDGNGSSAGGEERQRLLRGRTLLWGSPGSDSAGNA--------------GEAGALDREAGEVEDEGTEEPGVTGVDE--AEATGAPLST----------------VSPMEAAVQTRAPAAEPTDEWQEVVGYYQSLQLCLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTGVDTALAVWILMIIACGIHGVLWQAAVIQHWLKS 542          
BLAST of mRNA_H-paniculata_contig328.8798.1 vs. uniprot
Match: D7FTM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM5_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 4.390e-115
Identity = 235/562 (41.81%), Postives = 288/562 (51.25%), Query Frame = 0
Query:   79 ARGDSLPEIFRSSEVVQIYHIQATAMLYEQGGLNHDMSFALTAVAFNSLERPEVKVSMAYYPTNMTISLLPVISEDGRELHWENQEASMGYVLDIDQAYWTGTSYMGETTGAFFSSAVEFSLAYHQDHPRYQPFSVYEDYPGRAFVTASSCDEYVWEVLSAAQERGVRLVPAVMPRKYKIVIYSQTEPEVITLGAQRDGDGDQVEEDTTPPGGDSTGGRGSSSTAVDNGNSTVDSSDRAVGNSGTASIVESSSSGAGTGGQGEADGDSTDSVDSASGVNATRTGAGEVGDGVRRRALLRGEGSLSSADDAAADATAVVPSARTAIYPANEWGAILDRRFEMERGTSEEDGPSEAADGGSESENAVASTGDERGAEAGDNDDDADLEPVEAGMGTAQTDDDWEQVVGYYQSLKLCLQERKYSYVTSLKDFARNFDCLDDVAFISKGPHEYYKVNLTSTKLDQITEPEDLPEVPRSEVGFTWVDISLVVWIVSILACGVHGMLWQGEVVQHWMKA--STYKSDEEILVSEPGLPDSRPASLTRKITTEYLRLGNVLLGKSSGEF 638
            A G ++ E+FRSSEV+Q+YH+QATA LYEQGGLNHDMSF LT VAF S+ERP+VKVS+AY+PTNMTISLLPVISEDGREL W++Q AS+ YV+ +DQAYW   SYMGETTGAFFS AVEFSL +H+ HPRYQPFSVYEDYPG A            E  +  QE G                    EPE               +E T  PG                                 AS+ E+ ++GA                                               LS+                                            P+E A                                V+     A+  D+W++VVGYYQSL+LCLQERK+S+VTSLKDF R FDCLDDVAFI+ GPHEYYKVN+TSTKLD I+ PE+LPEV R    FT VD +L VWI+ I+ACG+HG+LWQ  V+QHW+K+  +    +E +  S+      RP SLTRKITTEYLR+G +LLGK+  +F
Sbjct:   28 ASGATVGEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTGVAFYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVDQAYWNAGSYMGETTGAFFSYAVEFSLEHHRLHPRYQPFSVYEDYPGSA-----------GEAGALDQEAG--------------------EPE---------------DEGTEVPG--------------------------------VASVDEAEATGA----------------------------------------------PLSTVS------------------------------------------PTEMA--------------------------------VQTHAPAAEPTDEWQEVVGYYQSLQLCLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTQVDTALAVWILMIIACGIHGVLWQAAVIQHWLKSYGNAQVEEEPLDGSDDSAEPQRPPSLTRKITTEYLRVGQLLLGKAEDDF 391          
BLAST of mRNA_H-paniculata_contig328.8798.1 vs. uniprot
Match: A0A835ZL91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL91_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.890e-53
Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0
Query:   82 DSLPEIFRSSEVVQIYHIQATAMLYEQGGLNHDMSFALTAVAFNSLERPEVKVSMAYYPTNMTISLLPVISEDGRELHWENQEASMGYVLDIDQA-----------------------YWTGTSYMGETTGAFFSSAVEFSLAYHQDHPRYQPFSVYEDYPGRAFVTASSCDEYVWEVLSAAQERGVRLVPAVMPRKYKIVIYSQTEPEVITLGAQRDGDG 279
            D+L + F  +EVVQ+YH+ A   LYEQGGLNH ++F LTA+AF S+E    +V + Y P+NMTISL+P+IS+DG  + W +  AS  Y  DID                         YW+  SY+  TTG+ FS+AV+ +  YHQ++P YQPFSVY+ YPGR  V ASSCDE+VW ++ AA  +GV++ P+++P+K KI++Y+  +P +I +    DG G
Sbjct:   35 DTLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGG 255          
BLAST of mRNA_H-paniculata_contig328.8798.1 vs. uniprot
Match: A0A7S2V1C8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.840e-23
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  140 PTNMTISLLPVISE--DGRE---LHWENQEASMGYVLDIDQAYWTGTSYMGETTGAFFSSAVEFSLAYHQDHPRYQPFSVYEDYPGRAFVTASSCDEYVWEVLSAAQERGVRLVPAVMPRKYKIVIYSQTEPEVITL 271
            P ++TIS+LP I E  DG +   L W N  AS+ Y  DID   W   +YMG   G+ F   ++++L Y   H  YQPFSVY+ YPG  ++ A SCDE+ W++        + L P V+P+K KI++YS  EPEV  L
Sbjct:    2 PVDLTISMLPEIQEKEDGSQDATLVWHNA-ASIYYESDIDSTVWDSITYMGTMGGSTFRYLLDYALDYGVKHTFYQPFSVYDAYPGHLYIPAISCDEFTWKLFEKLANLQITLNPVVVPKKVKIILYSPCEPEVYAL 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig328.8798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KI22_9PHAE6.930e-14247.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTM5_ECTSI4.390e-11541.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZL91_9STRA1.890e-5344.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1C8_9STRA2.840e-2342.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026138Ceroid-lipofuscinosis neuronal protein 5PFAMPF15014CLN5coord: 78..266
e-value: 2.1E-6
score: 27.6
IPR026138Ceroid-lipofuscinosis neuronal protein 5PANTHERPTHR15380CEROID-LIPOFUSCINOSIS, NEURONAL 5coord: 82..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..555
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 581..725
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 556..580
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig328contigH-paniculata_contig328:15265..24896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig328.8798.1mRNA_H-paniculata_contig328.8798.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig328 15265..25140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig328.8798.1 ID=prot_H-paniculata_contig328.8798.1|Name=mRNA_H-paniculata_contig328.8798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=725bp
MGRCEAINRRQWKLGILHPRPTCVLTNILWLILMVSVYSAVTGLPIAGSE
FPAVPRHLEEEETGYGHLAWIPLGLDGGARGDSLPEIFRSSEVVQIYHIQ
ATAMLYEQGGLNHDMSFALTAVAFNSLERPEVKVSMAYYPTNMTISLLPV
ISEDGRELHWENQEASMGYVLDIDQAYWTGTSYMGETTGAFFSSAVEFSL
AYHQDHPRYQPFSVYEDYPGRAFVTASSCDEYVWEVLSAAQERGVRLVPA
VMPRKYKIVIYSQTEPEVITLGAQRDGDGDQVEEDTTPPGGDSTGGRGSS
STAVDNGNSTVDSSDRAVGNSGTASIVESSSSGAGTGGQGEADGDSTDSV
DSASGVNATRTGAGEVGDGVRRRALLRGEGSLSSADDAAADATAVVPSAR
TAIYPANEWGAILDRRFEMERGTSEEDGPSEAADGGSESENAVASTGDER
GAEAGDNDDDADLEPVEAGMGTAQTDDDWEQVVGYYQSLKLCLQERKYSY
VTSLKDFARNFDCLDDVAFISKGPHEYYKVNLTSTKLDQITEPEDLPEVP
RSEVGFTWVDISLVVWIVSILACGVHGMLWQGEVVQHWMKASTYKSDEEI
LVSEPGLPDSRPASLTRKITTEYLRLGNVLLGKSSGEFEASTAAGTSGDD
EESQERGTRLSLPASTLAFAQVDRKERHRRVFSEGVGRTGQTLDAERRQL
HHVAGGNGGVAEDRTQRNGIVTDKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026138CLN5