mRNA_H-paniculata_contig3278.8794.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: D7FZR8_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR8_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 4.210e-128 Identity = 242/546 (44.32%), Postives = 319/546 (58.42%), Query Frame = 3
Query: 111 QHFEYSEELAQLALVRGQVYSSAAYATNPFVANWSFVNPACNNQTEGFIVNETYVGEGTEAFGYIGVDPVNKRIVAAFKGTSNLRDWMTDLRTWVTYNKRCAPDVRIQPLNGFFPASSTDATSRRARAXXXXXXXYFSISPLWTGGGEWRGGWHRDGGGGGVDLEKNTVEAAVGERGPSFGSVNRESGMITRQTKQHGEVEVSCNGGCGDGAEEKREKDLLPSLEKVVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPHKADGDDTATNETEKGNSRQVLERVTAHDSRRXXXXXXXHIQAQADLPNAPDSDADPADDEPEED-LLIGNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASDPLEMPPFDMMKAQEEARWADYDEAIRREDDAY 1745
QHFEY E+L +LA++ YSSAAY V W F NPACN QT+GF+ E++VGE T+AF ++GVD V +RIV AFKGT++++DW+T+LRTW+ Y RCAP + P +A + RA AA + S R G + G+ E +GG G+G + R+ + XXXXXX XXXXXXXXXXXXXX R A G +++ +E A + +AP + A D+ E+D LLIGNVHFGFCE+YQ++V EG ++ LAR++P Y I VTGHSLG AAA+VCAADL +RLG+ SERVVLYT+GEPR GDG+FA+G+N+HVGTAYR+VH KD+VPHLS+CCH WLGKCI E CPYQH +E++Y NDM+ G PW QCN T+GEDY CDPQ +D S++DH YF + VG YC + P ++ PF + + +E+A+WA Y+ A+R+EDDAY
Sbjct: 27 QHFEYDEDLGKLAVI----YSSAAYDR---VEEWVFANPACNEQTKGFVFVESFVGEHTDAFSFVGVDTVGERIVVAFKGTTDVQDWVTNLRTWIHYTHRCAPAGGPDTVAATTPHPGGEAAAPGRRA------------------------------------------AAEMSQSRSRQQHRRRPGGQPADLR--GQEEAKASGG-GEGRVDGRQAESXXXXXXXXXXXXXXXXGVVGREDXXXXXXXXXXXXXXGVGGRDPTAAGYASSS----------AME------------------AAPRERGDAPGGEGPGAGDDGEDDQLLIGNVHFGFCEFYQTLVAEGLAAKVLHLARKHPTYTIFVTGHSLGGAAAAVCAADLVERLGVASERVVLYTLGEPRAGDGIFADGINEHVGTAYRIVHDKDLVPHLSLCCHGWLGKCIGGEEACPYQHSTEIVYANDMSDGSPWIQCNDTVGEDYACDPQGWDLSIADHVSYFARTVGQYCNTPPEDLKPFPLAQEEEKAKWAPYEAAMRQEDDAY 492
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A6H5KHF8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF8_9PHAE) HSP 1 Score: 355 bits (912), Expect = 1.830e-112 Identity = 238/526 (45.25%), Postives = 296/526 (56.27%), Query Frame = 3
Query: 111 QHFEYSEELAQLALVRGQVYSSAAYATNPFVANWSFVNPACNNQTEGFIVNETYVGEGTEAFGYIGVDPVNKRIVAAFKGTSNLRDWMTDLRTWVTYNKRCAP----DVRIQPLNGFFPASSTDATSRRARAXXXXXXXYFSISPLWTGGGEWRGGWHRDGGGGGVDLEKNTVEAAVGERGPSFGSVNRESGMITRQTKQHGEVEVSCNGGCGDGAEEKREKDLLPSLEKVVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPHKADGDDTATNETEKGNSRQVLERVTAHDSRRXXXXXXXHIQAQADLPNAPDSDADPADDEPEEDLLIGNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASDPLEMPPFDM 1676
QHFEY E L +LA++ YSSAAY V W F NPACN QT+GF+ E++VGE T+AFG++GVD V +RIV AFKGT++++DW+T+LRTW+ YN RCAP D P +P A ++ A + R GG D +A+ G G G ESG R G E G G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G+D LLIGNVHFGFCE+YQ++V EG ++ LAR++P Y I VTGHSLG AAA+VCAADL +RLG+ SERVVLYT+GEPR GDGVFA+G+N+HVGTAYR+VH KD+VPHLS+CCH WLGKCI E CPYQH +E++Y NDM+ G PW QC+ +GEDY CDPQ +D S++DH YF + VG YC + P ++ PF +
Sbjct: 27 QHFEYDEGLGKLAVI----YSSAAYDR---VEEWVFANPACNEQTKGFVFIESFVGEHTDAFGFVGVDTVGERIVVAFKGTTDVQDWVTNLRTWIHYNHRCAPAGEADTVAAPTT--YPGGEAVAPGQQTAAEVSQSCSHQQH--------------RRRPGGQQADSRAQEAKASGGREGWVDGGP-AESGAAPRL----GGREPLSGAGIVGG-------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASREHGEDDR--------------------------------------------------------LLIGNVHFGFCEFYQTLVAEGLATKVLHLARKHPTYTIFVTGHSLGGAAAAVCAADLVERLGVASERVVLYTLGEPRAGDGVFADGINEHVGTAYRIVHDKDLVPHLSLCCHGWLGKCIGGEEACPYQHSTEIVYANDMSDGSPWIQCDDMVGEDYACDPQGWDLSIADHVSYFARIVGQYCNTPPEDLKPFPL 461
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A835YPJ5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ5_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.390e-40 Identity = 89/187 (47.59%), Postives = 107/187 (57.22%), Query Frame = 3
Query: 1101 IGNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHA-WLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASDPLE 1658
IG VH GFCEYY S+ G + + LA +P Y I TGHSLG AAA++ AADL+ R G+ ER+ LYT G PR GD F + HVG AYR+VH DVV HL+ CC A W G C E+ CPY EV Y + MA G C + ED CD FD S+ +H YF +V YCA P E
Sbjct: 136 IGLVHRGFCEYYTSLSDLGLPEEIVALADMHPSYTIYTTGHSLGGAAATLAAADLSLRFGVPRERLQLYTFGAPRPGDASFGALIGAHVGAAYRVVHAGDVVAHLAPCCLASWTGGCATLET-CPYHAAQEVWYPSAMAVGSNHIVCE-PVAEDDDCD-NLFDRSIKEHQFYFGIHVAKYCAQVPTE 319
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A7S2HQX8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQX8_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.280e-37 Identity = 84/181 (46.41%), Postives = 104/181 (57.46%), Query Frame = 3
Query: 1101 IGNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLC-DPQAFDFSVSDHTHYFQKNVGTYC 1640
+GNVH GFC YY S+ ++G DR A L P YL +VTGHSLGAAAA+V A DL R I LYT G+PR G F+E + D AYR+VHKKD++ HL CC A KC ++ CPY EV YDN+M + +CN GED C D +V DH +YF +G YC
Sbjct: 105 LGNVHDGFCSYYNSLQSKGMADRFAELVALYPTYLPIVTGHSLGAAAAAVMAVDLNARYEISP---YLYTFGQPRVGGYSFSESIGDATAKAYRVVHKKDMIAHLPPCC-AVAYKCYKGDT-CPYHTGHEVWYDNNMKDSSDYVECNQ--GEDTSCSDSLMVALNVDDHLNYFNTELGDYC 278
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A7S4EY64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EY64_CHRCT) HSP 1 Score: 123 bits (308), Expect = 2.780e-27 Identity = 73/182 (40.11%), Postives = 95/182 (52.20%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASD 1649
G VH GFCEYY + G L ++ DY ++TGHSLG AAA++ A D+ + +LYT G PR GD FA+ LN V AYR+VH +D+VPHL C L C ++ P+ +EV Y N M GD + C+G+ GED C SVSDH YF N C +
Sbjct: 123 GTVHKGFCEYYVKLAKLGVAGNFTALMEKHSDYTPVMTGHSLGGAAAALMAYDVYE-YSRGRAAALLYTYGMPRVGDFEFAKALNARVANAYRIVHARDIVPHLPPC--VGLLGCSQGKAM-PHHTATEVFYPNAMRSGDNFTICDGS-GEDSHCSNGVAHISVSDHCSYFGINNCAICCRE 299
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A7S4BC24_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BC24_CHRCT) HSP 1 Score: 123 bits (308), Expect = 9.900e-27 Identity = 73/182 (40.11%), Postives = 95/182 (52.20%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASD 1649
G VH GFCEYY + G L ++ DY ++TGHSLG AAA++ A D+ + +LYT G PR GD FA+ LN V AYR+VH +D+VPHL C L C ++ P+ +EV Y N M GD + C+G+ GED C SVSDH YF N C +
Sbjct: 192 GTVHKGFCEYYVKLAKLGVAGNFTALMEKHSDYTPVMTGHSLGGAAAALMAYDVYE-YSRGRAAALLYTYGMPRVGDFEFAKALNARVANAYRIVHARDIVPHLPPC--VGLLGCSQGKAM-PHHTATEVFYPNAMRSGDNFTICDGS-GEDSHCSNGVAHISVSDHCSYFGINNCAICCRE 368
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A0K0F3S4_STRVS (Lipase_3 domain-containing protein n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0F3S4_STRVS) HSP 1 Score: 117 bits (294), Expect = 1.050e-25 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSE-VLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTY 1637
G+V F + V +G D L NP Y ++VTGHSLG A AS+CAA + + S +VLYTMGEPR G+ + G + +YR++HK+D+VPHL P + Y+H E V Y+N+M PG +K C G ++ C D S+ DH HYF +V Y
Sbjct: 116 GSVSSYFYTAFSDVWLKGLKDSFFSLKNSNPTYKVVVTGHSLGGAMASLCAATIVASGYVPSHNIVLYTMGEPRVGNDDYVIGYDYLNIESYRIIHKQDLVPHL------------PPDHLFGYKHHKEEVYYNNNMTPGSMYKTCKGDDTDN--CSSSTVDLSIYDHLHYFDIDVSGY 280
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A0N4ZZX3_PARTI (Ricin B-type lectin domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4ZZX3_PARTI) HSP 1 Score: 115 bits (287), Expect = 1.060e-24 Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCS-EVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQKNVGTYCASDPLEMPP 1667
G V F + + V + G D +NPDY + VTGHSLGAA AS+ AA++ + +R++ T GEPR GD +A+G + VG +YR++H +D +PH +P ++ YQH EV YDNDM PG + C+ T + C Q +DF SDH+ YF K+V + S L + P
Sbjct: 121 GGVSRYFYDAWSLVWSSGLRDAFLTAKNKNPDYDVWVTGHSLGAAMASLSAANIGYHQYVPKDRLMSITFGEPRVGDVDYAKGYDAVVGYSYRVIHHRDPIPH------------VPFKNMMDYQHTKVEVFYDNDMTPGSNYTICS-TSDDTENCSNQYWDFQHSDHSLYF-KSVHSIQNSKCLNLYP 295
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A0N4ZBW7_PARTI (Lipase_3 domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4ZBW7_PARTI) HSP 1 Score: 114 bits (285), Expect = 1.960e-24 Identity = 63/173 (36.42%), Postives = 92/173 (53.18%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAFDFSVSDHTHYFQK 1622
GNV F + + V G D NP+Y + +TGHSLG + A++ AA+L +++ L T GEPR GD FA ++ ++G AYR++HK+D VPH+ + LG H SE+ YDNDM+PG P+ C G I +D C + D + DH YF++
Sbjct: 124 GNVSRYFYDAWSLVWNGGLRDGYFNARNANPNYEVWITGHSLGGSMAAIAAANLVYHNYATKDQIKLITFGEPRGGDTAFALNIDQNIGYAYRIIHKRDPVPHMPL--KGMLGY---------VHHKSEIFYDNDMSPGSPFLVCTG-IDDDNECSNKYADLNPFDHLFYFKE 284
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Match: A0A811KTS0_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KTS0_9BILA) HSP 1 Score: 113 bits (282), Expect = 4.910e-24 Identity = 66/179 (36.87%), Postives = 90/179 (50.28%), Query Frame = 3
Query: 1104 GNVHFGFCEYYQSVVTEGFGDRMALLARENPDYLILVTGHSLGAAAASVCAADLTQRLGIESERVVLYTMGEPRTGDGVFAEGLNDHVGTAYRLVHKKDVVPHLSICCHAWLGKCIPAESHCPYQHCSEVLYDNDMAPGDPWKQCNGTIGEDYLCDPQAF-DFSVSDHTHYFQKNVGTY 1637
G V F Y+S++ G L +NP Y +LVTGHSLG A AS+ A DL + SE+V L T G+PRTGD FAE + + YR+ H +D+VPH+ P H SEV Y+N+M PGD + C EDY C + ++S+ H +Y+ V Y
Sbjct: 122 GTVSEYFYSVYRSILDTGISAEFIKLFAQNPHYEVLVTGHSLGGAMASIAAMDLVHMAKVPSEQVKLVTFGQPRTGDQKFAEDHDRLIPHTYRITHGRDIVPHVP-----------PVGFEGYNHHTSEVWYNNNMLPGDDYIVCEEQ--EDYKCSNSNYLNYSILAHLYYYNLMVSDY 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3278.8794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3278.8794.1 >prot_H-paniculata_contig3278.8794.1 ID=prot_H-paniculata_contig3278.8794.1|Name=mRNA_H-paniculata_contig3278.8794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=595bp MWVLLLLMVAMVLGEDPTLSSDDGDARPSRYQHFEYSEELAQLALVRGQVback to top mRNA from alignment at H-paniculata_contig3278:3090..14459- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3278.8794.1 ID=mRNA_H-paniculata_contig3278.8794.1|Name=mRNA_H-paniculata_contig3278.8794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11370bp|location=Sequence derived from alignment at H-paniculata_contig3278:3090..14459- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3278:3090..14459- >mRNA_H-paniculata_contig3278.8794.1 ID=mRNA_H-paniculata_contig3278.8794.1|Name=mRNA_H-paniculata_contig3278.8794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3570bp|location=Sequence derived from alignment at H-paniculata_contig3278:3090..14459- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |