prot_H-paniculata_contig32561.8756.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32561.8756.1
Unique Nameprot_H-paniculata_contig32561.8756.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 5.740e-26
Identity = 92/212 (43.40%), Postives = 109/212 (51.42%), Query Frame = 0
Query:    1 MISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGGWGGRGAXXXXXXXRDGGSLGVHDATTAGGQGGQTPPRGGSGDVSDGLLAPAVVQQEAVEKETDVNAGHASLPEGENEGGTRKRSAEGVVGAVALDPLGGESAVASASEGXXXXXXX----KRPCAFFLRGRCAKGEACTYSHDVQRQN 208
            MI VEG+KFRVLLGTSP+EV +WR  RRKRWPT EN ARK E+E+KRRALG L  DP             XXXXXX       G      A GQ G       S                 V+ E+  NAG         EGG R R  +G   ++ +  +G ESAV    EG           KR C F+L+GRC KGEACT+SHDV+R+N
Sbjct:  131 MIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXGXXXXXXGASAQRAAPGQNGAAV----SSXXXXXXXXXXXXXXXVVDGESASNAGA--------EGGKRPREEDGAGSSLKVARVGDESAVVQG-EGTRKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKN 329          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.370e-24
Identity = 90/215 (41.86%), Postives = 112/215 (52.09%), Query Frame = 0
Query:    1 MISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGGWGGRGAXXXXXXXRDGGSLGVHDATTAGGQGGQTPPRGGSGDVSDGLLAPAVVQQEA----VEKETDVNAGHASLPEGENEGGTRKRSAEGVVGAVALDPLGGESAVASA---SEGXXXXXXXKRPCAFFLRGRCAKGEACTYSHDVQRQN 208
            MI VEG+KFRVLLGTSP+EV +WR  RRKRWPT EN ARK E+E+KRRALG L  DP             XXXXXXX             A  Q  +  P   S  +S    A  V   +     V+ E+  NAG         EGG R R  +G   ++ +  +  E AV      ++        KR C F+L+GRC KGEACT+SHDV+R+N
Sbjct:  114 MIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXX------XXXXXXXXXXXXXXXXXXXXXXXASAQ--RAAPGPNSAAISSVGAADTVASDDGGGAVVDGESASNAGA--------EGGKRPREEDGAGSSLKVARVDDEGAVGQGEGTTKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKN 312          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A7S2RYE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYE8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.280e-9
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    7 RKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGG 64
            +KFRVL+GTSPEEV QWR  RRK WP+  N+ARK+ E+ +RR+ G L  DP  T RGG
Sbjct:  125 QKFRVLMGTSPEEVAQWRAERRKNWPSKTNLARKSAEQHERRSRGSL--DPKATARGG 180          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A4D9DDZ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDZ4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.970e-8
Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALG 51
            +++VEGR++R+L+G +PEEVEQWR+ RRK +PT + VA++ EE R RR  G
Sbjct:  168 VMNVEGRRYRILVGNAPEEVEQWREERRKNYPTAQAVAKRGEEARARRGRG 218          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A024T851_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T851_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.360e-7
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARD---------PGPT 60
            I VEG+KF+VL+G SPEE+ +WR+ RRK+WP+  NV RK E+  +R   G +  +         PGPT
Sbjct:  290 IEVEGQKFQVLVGNSPEEITKWREERRKKWPSESNVKRKNEQMGERVQAGDIPANKKLKTSPALPGPT 357          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A6G0WI02_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI02_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.300e-7
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALG 51
            I VEG+ F+VL+G SPEE+++WR+ RRK+WP+  NV RK E++ +R   G
Sbjct:  262 IVVEGQTFQVLMGNSPEEIQKWREERRKKWPSESNVKRKMEQKEERAQAG 311          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A1V9Z0Q3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0Q3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.520e-6
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGL 53
            I VEG+KF VL+G SPEE+ +WR+ RRK+WP+   V RK E+  +R   G +
Sbjct:  259 IEVEGQKFTVLVGNSPEEIAKWREERRKKWPSTAVVKRKLEQTEERMLAGDI 310          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: W4FQN8_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQN8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.330e-6
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 47
            I VEG+KF VL+G SPE++ +WR+ RRK+WP+  NV RK ++ + R
Sbjct:  288 IEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDR 333          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: W4FR42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR42_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.030e-6
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 47
            I VEG+KF VL+G SPE++ +WR+ RRK+WP+  NV RK ++ + R
Sbjct:  288 IEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDR 333          
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A1W0ABE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.760e-6
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    2 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 47
            I VEG+KF VL+G SPE++ +WR+ RRK+WP+   V RK EE  +R
Sbjct:  725 IDVEGQKFTVLVGNSPEDIAKWREERRKKWPSTSVVKRKMEENEER 770          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FK97_ECTSI5.740e-2643.40Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JLR5_9PHAE4.370e-2441.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RYE8_9STRA2.280e-960.34Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9DDZ4_9STRA2.970e-854.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A024T851_9STRA3.360e-745.59Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0WI02_9STRA4.300e-752.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z0Q3_9STRA3.520e-650.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
W4FQN8_9STRA4.330e-652.17C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
W4FR42_9STRA5.030e-652.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1W0ABE8_9STRA5.760e-654.35Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 179..204
e-value: 0.0028
score: 26.9
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 180..203
e-value: 2.2E-4
score: 21.0
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 178..205
score: 14.934
NoneNo IPR availableGENE3D4.10.1000.10coord: 174..211
e-value: 1.2E-6
score: 30.3
IPR019496Nuclear fragile X mental retardation-interacting protein 1, conserved domainPFAMPF10453NUFIP1coord: 16..49
e-value: 2.0E-10
score: 40.4
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 181..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32561contigH-paniculata_contig32561:501..1499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32561.8756.1mRNA_H-paniculata_contig32561.8756.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32561 501..1502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32561.8756.1 ID=prot_H-paniculata_contig32561.8756.1|Name=mRNA_H-paniculata_contig32561.8756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRAL
GGLARDPGPTGRGGWGGRGASRGRGRGRDGGSLGVHDATTAGGQGGQTPP
RGGSGDVSDGLLAPAVVQQEAVEKETDVNAGHASLPEGENEGGTRKRSAE
GVVGAVALDPLGGESAVASASEGGGSGGGGKRPCAFFLRGRCAKGEACTY
SHDVQRQNCRF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR019496NUFIP1_cons_dom
IPR036855Znf_CCCH_sf