mRNA_H-paniculata_contig32561.8756.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI) HSP 1 Score: 115 bits (288), Expect = 3.160e-26 Identity = 93/213 (43.66%), Postives = 110/213 (51.64%), Query Frame = 1
Query: 1 QMISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGGWGGRGAXXXXXXXRDGGSLGVHDATTAGGQGGQTPPRGGSGDVSDGLLAPAVVQQEAVEKETDVNAGHASLPEGENEGGTRKRSAEGVVGAVALDPLGGESAVASASEGXXXXXXX----KRPCAFFLRGRCAKGEACTYSHDVQRQN 627
QMI VEG+KFRVLLGTSP+EV +WR RRKRWPT EN ARK E+E+KRRALG L DP XXXXXX G A GQ G S V+ E+ NAG EGG R R +G ++ + +G ESAV EG KR C F+L+GRC KGEACT+SHDV+R+N
Sbjct: 130 QMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXGXXXXXXGASAQRAAPGQNGAAV----SSXXXXXXXXXXXXXXXVVDGESASNAGA--------EGGKRPREEDGAGSSLKVARVGDESAVVQG-EGTRKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKN 329
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE) HSP 1 Score: 110 bits (274), Expect = 2.410e-24 Identity = 91/216 (42.13%), Postives = 113/216 (52.31%), Query Frame = 1
Query: 1 QMISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGGWGGRGAXXXXXXXRDGGSLGVHDATTAGGQGGQTPPRGGSGDVSDGLLAPAVVQQEA----VEKETDVNAGHASLPEGENEGGTRKRSAEGVVGAVALDPLGGESAVASA---SEGXXXXXXXKRPCAFFLRGRCAKGEACTYSHDVQRQN 627
QMI VEG+KFRVLLGTSP+EV +WR RRKRWPT EN ARK E+E+KRRALG L DP XXXXXXX A Q + P S +S A V + V+ E+ NAG EGG R R +G ++ + + E AV ++ KR C F+L+GRC KGEACT+SHDV+R+N
Sbjct: 113 QMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXX------XXXXXXXXXXXXXXXXXXXXXXXASAQ--RAAPGPNSAAISSVGAADTVASDDGGGAVVDGESASNAGA--------EGGKRPREEDGAGSSLKVARVDDEGAVGQGEGTTKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKN 312
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A7S2RYE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYE8_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 4.290e-9 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 22 RKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARDPGPTGRGG 195
+KFRVL+GTSPEEV QWR RRK WP+ N+ARK+ E+ +RR+ G L DP T RGG
Sbjct: 125 QKFRVLMGTSPEEVAQWRAERRKNWPSKTNLARKSAEQHERRSRGSL--DPKATARGG 180
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A4D9DDZ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDZ4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.550e-8 Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 QMISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALG 156
++++VEGR++R+L+G +PEEVEQWR+ RRK +PT + VA++ EE R RR G
Sbjct: 167 RVMNVEGRRYRILVGNAPEEVEQWREERRKNYPTAQAVAKRGEEARARRGRG 218
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A6G0WI02_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI02_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.240e-7 Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 1 QMISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALG 156
Q I VEG+ F+VL+G SPEE+++WR+ RRK+WP+ NV RK E++ +R G
Sbjct: 260 QKIVVEGQTFQVLMGNSPEEIQKWREERRKKWPSESNVKRKMEQKEERAQAG 311
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A024T851_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T851_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 8.450e-7 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 7 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGLARD---------PGPT 183
I VEG+KF+VL+G SPEE+ +WR+ RRK+WP+ NV RK E+ +R G + + PGPT
Sbjct: 290 IEVEGQKFQVLVGNSPEEITKWREERRKKWPSESNVKRKNEQMGERVQAGDIPANKKLKTSPALPGPT 357
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A1V9Z0Q3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0Q3_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 8.840e-6 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 7 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALGGL 162
I VEG+KF VL+G SPEE+ +WR+ RRK+WP+ V RK E+ +R G +
Sbjct: 259 IEVEGQKFTVLVGNSPEEIAKWREERRKKWPSTAVVKRKLEQTEERMLAGDI 310
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: W4FQN8_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQN8_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.090e-5 Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 7 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 144
I VEG+KF VL+G SPE++ +WR+ RRK+WP+ NV RK ++ + R
Sbjct: 288 IEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDR 333
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: W4FR42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR42_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.260e-5 Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 7 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 144
I VEG+KF VL+G SPE++ +WR+ RRK+WP+ NV RK ++ + R
Sbjct: 288 IEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDR 333
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Match: A0A1W0ABE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE8_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.440e-5 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 7 ISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKR 144
I VEG+KF VL+G SPE++ +WR+ RRK+WP+ V RK EE +R
Sbjct: 725 IDVEGQKFTVLVGNSPEDIAKWREERRKKWPSTSVVKRKMEENEER 770 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32561.8756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32561.8756.1 >prot_H-paniculata_contig32561.8756.1 ID=prot_H-paniculata_contig32561.8756.1|Name=mRNA_H-paniculata_contig32561.8756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp MISVEGRKFRVLLGTSPEEVEQWRDARRKRWPTVENVARKTEEERKRRALback to top mRNA from alignment at H-paniculata_contig32561:501..1502- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32561.8756.1 ID=mRNA_H-paniculata_contig32561.8756.1|Name=mRNA_H-paniculata_contig32561.8756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-paniculata_contig32561:501..1502- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32561:501..1502- >mRNA_H-paniculata_contig32561.8756.1 ID=mRNA_H-paniculata_contig32561.8756.1|Name=mRNA_H-paniculata_contig32561.8756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig32561:501..1502- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |