prot_H-paniculata_contig3247.8737.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3247.8737.1
Unique Nameprot_H-paniculata_contig3247.8737.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig3247.8737.1 vs. uniprot
Match: D7FXB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB4_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 7.390e-15
Identity = 59/161 (36.65%), Postives = 79/161 (49.07%), Query Frame = 0
Query:    8 EAYPVDGGVYMNQ----QQPYGAQTXXXXXXXXXXXXSQGGYQASATSQPYHGPTAQQAVSVASAPFAPQGVAGTHPGGPHHVVVVQTRNEGAVMRKPHSYCCLAWLSLFCCCPIGLFAVYNAYKVNRYFDRQEFEKAYKASEMAKKAAILAVIVGXIVSI 164
            +AY V+GG   +Q    QQPYGAQ                 +  +  +QPY+GPTAQQAV          G AG                          +CC++ LSLFCC PIG+FAV  +  V+  + R +F+ A  AS MAKKAAILA+++G + SI
Sbjct:   11 QAYAVEGGQGYHQPSAPQQPYGAQPQV--------------HGQAVVAQPYNGPTAQQAVV---------GQAGNQX---XXXXXXXXXXXXXXXXXXXXHCCISVLSLFCCLPIGIFAVCMSCSVDSKWRRGDFDGANSASHMAKKAAILAIMLGLVWSI 145          
BLAST of mRNA_H-paniculata_contig3247.8737.1 vs. uniprot
Match: A0A6H5KPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-10
Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 0
Query:   51 SQPYHGPTAQQAVSVASAPFAPQGVAGTHPGGPHHVVVVQTRNEGAVMRKPHSYCCLAWLSLFCCCPIGLFAVYNAYKVNRYFDRQEFEKAYKASEMAKKAAILAVIVGXIVSI 164
            +QPY+GPTAQ+AV          G AG                         S+CC++ LSLFCC PIG+FAV  +  V   + R +F+ A  AS+MA KAAILA+I+G   SI
Sbjct:   61 AQPYNGPTAQEAVV---------GQAGNQX---XXXXXXXXXXXXXXXXXXXSHCCISVLSLFCCLPIGIFAVCMSCSVESKWRRGDFDGANSASDMATKAAILAIILGLAWSI 162          
BLAST of mRNA_H-paniculata_contig3247.8737.1 vs. uniprot
Match: A0A5C5U900_9CORY (CD225/dispanin family protein n=1 Tax=Corynebacterium canis TaxID=679663 RepID=A0A5C5U900_9CORY)

HSP 1 Score: 52.4 bits (124), Expect = 9.190e-6
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   99 RKPHSYCCLAWLS-LFCCCPIGLFAVYNAYKVNRYFDRQEFEKAYKASEMAKKAAILAVIVGXI 161
            +KP +Y  L  LS LFCC PIG +A+Y + +V++ + + +  +A +ASE AKK AI++ + G +
Sbjct:   16 QKPENYLILTILSTLFCCLPIGAYAIYQSLQVDKLWGQGQVVEAAQASESAKKFAIISAVCGVV 79          
BLAST of mRNA_H-paniculata_contig3247.8737.1 vs. uniprot
Match: A0A6N8G7F8_9ACTN (CD225/dispanin family protein n=1 Tax=Streptomonospora sp. PA3 TaxID=2607326 RepID=A0A6N8G7F8_9ACTN)

HSP 1 Score: 51.2 bits (121), Expect = 4.440e-5
Identity = 25/76 (32.89%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   93 NEGAVMRKPHSYCCLAWLSLFCCCPIGLFAVYNAYKVNRYFDRQEFEKAYKASEMAKKAAILAVIVGXIVSIAGGV 168
            ++      P+ +   A LS+FCC P  + A+ +A KVN  ++R +F  A + +  AK+  I+A+IVG +  + GG+
Sbjct:   32 SQAGATEPPNDFLVPAILSMFCCWPFAIPAILSAAKVNAEWNRGDFASAQERAGKAKRFTIIALIVGILCYVIGGI 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3247.8737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXB4_ECTSI7.390e-1536.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPP0_9PHAE1.410e-1040.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5C5U900_9CORY9.190e-640.63CD225/dispanin family protein n=1 Tax=Corynebacter... [more]
A0A6N8G7F8_9ACTN4.440e-532.89CD225/dispanin family protein n=1 Tax=Streptomonos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007593CD225/Dispanin familyPFAMPF04505CD225coord: 100..165
e-value: 4.4E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR14948NG5coord: 22..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..188
NoneNo IPR availableTMHMMTMhelixcoord: 151..168
NoneNo IPR availableTMHMMTMhelixcoord: 102..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3247contigH-paniculata_contig3247:1648..16438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3247.8737.1mRNA_H-paniculata_contig3247.8737.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3247 1563..17900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3247.8737.1 ID=prot_H-paniculata_contig3247.8737.1|Name=mRNA_H-paniculata_contig3247.8737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MENNKAVEAYPVDGGVYMNQQQPYGAQTQQPYGAQPQQPYSQGGYQASAT
SQPYHGPTAQQAVSVASAPFAPQGVAGTHPGGPHHVVVVQTRNEGAVMRK
PHSYCCLAWLSLFCCCPIGLFAVYNAYKVNRYFDRQEFEKAYKASEMAKK
AAILAVIVGIIVSIAGGVEGSENTAHQEDGSFSDNRGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007593CD225/Dispanin_fam