prot_H-paniculata_contig32468.8736.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32468.8736.1
Unique Nameprot_H-paniculata_contig32468.8736.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.520e-28
Identity = 55/74 (74.32%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 DGFDVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLAKSALSKEEGTVGTLVDKVEV 74
            DGFDVAGSFLLR+LAKPSLN+DLAL++P+EC+V+RD+LNHRYLDKRALYAGH+AK+A+    G++G LVDKVE+
Sbjct:  179 DGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHVAKTAMDAA-GSLGKLVDKVEL 251          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.850e-28
Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 DGFDVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLAKSALSKEEGTVGTLVDKVEV 74
            +GFDVAGSFLLR+LAKPSLN+DLAL++P+EC+V+RD+LNHRYLDKRALYAGHLAK+A+    G +G LVDKVE+
Sbjct:  184 NGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAA-GALGKLVDKVEL 256          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A2R5G2X0_9STRA (Nucleolar protein 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2X0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.280e-14
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 DGFDVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLAKSALSKEEGTVGT 67
            +  DV GS+LL T+ KPS  +DLA+++PA+C   +D LNHRYLDKR LY G LAKS   K++    T
Sbjct:  192 EAVDVVGSYLLGTVTKPSRTVDLAIRMPADCFKRKDYLNHRYLDKRRLYLGVLAKSLAKKKDLVAAT 258          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: L1JNQ1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNQ1_GUITC)

HSP 1 Score: 68.6 bits (166), Expect = 8.990e-12
Identity = 29/53 (54.72%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    4 DVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLAKS 56
            ++ GSFLLRTL KP LN+D+A+++PA+CL A+D LN R++ KR +Y  H+AK+
Sbjct:  170 ELVGSFLLRTLVKPDLNVDMAVEMPADCLHAKDFLNGRFMYKRNMYLSHIAKA 222          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A7S3ZGA4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZGA4_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 1.460e-10
Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    5 VAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLAKSALSKE 61
            V GS++LR +AKP  N+DLAL+IP++ L+ +D LN++YL KRA YA  +A++  S E
Sbjct:   22 VVGSYILRVVAKPVTNVDLALEIPSDSLMQKDYLNYKYLAKRARYAEAVAEALKSHE 78          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A401PG27_SCYTO (Nucleolar protein 6 n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PG27_SCYTO)

HSP 1 Score: 64.3 bits (155), Expect = 2.570e-10
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    5 VAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLA 54
            V GS+LL T AKP +N+D+A+ +PAE L A+D LN RYL KRALY  H+A
Sbjct:  264 VIGSYLLGTCAKPEINVDVAVTMPAEILQAKDNLNQRYLRKRALYLAHIA 313          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: S8E1Q7_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E1Q7_9LAMI)

HSP 1 Score: 61.2 bits (147), Expect = 3.380e-9
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    4 DVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYA----GHLAKSALSKE 61
            ++ GS+ +R++AKP +NIDL L++P EC   +D LNHRY  KR LY      +L KSAL K+
Sbjct:   70 EIGGSYSIRSVAKPDVNIDLFLRLPKECFYEKDYLNHRYHAKRFLYLCIVKKYLTKSALVKD 131          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: UPI001455CC0A (nucleolar protein 6-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455CC0A)

HSP 1 Score: 61.2 bits (147), Expect = 3.400e-9
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    5 VAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLA 54
            V GSFLL TL +P LNIDLAL++P  C   +D LN RY  KRALY  +LA
Sbjct:  128 VVGSFLLDTLTRPDLNIDLALEMPQSCRQPKDYLNFRYHHKRALYCAYLA 177          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A8B7ARK9_ORYAF (Nucleolar protein 6 n=1 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B7ARK9_ORYAF)

HSP 1 Score: 60.8 bits (146), Expect = 4.640e-9
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    5 VAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLA 54
            + GS+LL T  +P +N+D+AL +P E L  +DALNHRY  KRAL+  HLA
Sbjct:  138 IVGSYLLDTCIRPDINVDMALIMPREILQDKDALNHRYFRKRALFLAHLA 187          
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Match: A0A8B7ALI9_ORYAF (Nucleolar protein 6 n=2 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B7ALI9_ORYAF)

HSP 1 Score: 60.8 bits (146), Expect = 4.640e-9
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    5 VAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYAGHLA 54
            + GS+LL T  +P +N+D+AL +P E L  +DALNHRY  KRAL+  HLA
Sbjct:  138 IVGSYLLDTCIRPDINVDMALIMPREILQDKDALNHRYFRKRALFLAHLA 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32468.8736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGX0_ECTSI1.520e-2874.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEV9_9PHAE3.850e-2874.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5G2X0_9STRA3.280e-1452.24Nucleolar protein 6 n=1 Tax=Hondaea fermentalgiana... [more]
L1JNQ1_GUITC8.990e-1254.72Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S3ZGA4_9EUKA1.460e-1050.88Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A401PG27_SCYTO2.570e-1060.00Nucleolar protein 6 n=1 Tax=Scyliorhinus torazame ... [more]
S8E1Q7_9LAMI3.380e-948.39Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
UPI001455CC0A3.400e-960.00nucleolar protein 6-like n=1 Tax=Asterias rubens T... [more]
A0A8B7ARK9_ORYAF4.640e-954.00Nucleolar protein 6 n=1 Tax=Orycteropus afer afer ... [more]
A0A8B7ALI9_ORYAF4.640e-954.00Nucleolar protein 6 n=2 Tax=Orycteropus afer afer ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 21..61
e-value: 7.1E-10
score: 39.1
NoneNo IPR availableGENE3D3.30.460.10coord: 1..70
e-value: 1.3E-14
score: 56.2
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 3..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32468contigH-paniculata_contig32468:1459..1683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32468.8736.1mRNA_H-paniculata_contig32468.8736.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32468 1459..1683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32468.8736.1 ID=prot_H-paniculata_contig32468.8736.1|Name=mRNA_H-paniculata_contig32468.8736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
DGFDVAGSFLLRTLAKPSLNIDLALKIPAECLVARDALNHRYLDKRALYA
GHLAKSALSKEEGTVGTLVDKVEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1
IPR005554NOL6/Upt22